Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MECP2P51608 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MECP2P51608 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MECP2P51608 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MECP2P51608 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.78■□□□□ 0.92
MECP2P51608 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MECP2P51608 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MECP2P51608 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MECP2P51608 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MECP2P51608 AL139125.2-201ENST00000623134 1869 ntBASIC20.78■□□□□ 0.92
MECP2P51608 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
MECP2P51608 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MECP2P51608 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MECP2P51608 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
MECP2P51608 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MECP2P51608 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MECP2P51608 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
MECP2P51608 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MECP2P51608 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MECP2P51608 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MECP2P51608 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MECP2P51608 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MECP2P51608 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MECP2P51608 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.76■□□□□ 0.91
MECP2P51608 AC133561.1-201ENST00000568600 2415 ntBASIC20.76■□□□□ 0.91
MECP2P51608 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MECP2P51608 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MECP2P51608 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.76■□□□□ 0.91
MECP2P51608 SUZ12P1-203ENST00000578195 985 ntBASIC20.76■□□□□ 0.91
MECP2P51608 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.75■□□□□ 0.91
MECP2P51608 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
MECP2P51608 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MECP2P51608 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
MECP2P51608 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MECP2P51608 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MECP2P51608 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MECP2P51608 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.75■□□□□ 0.91
MECP2P51608 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.75■□□□□ 0.91
MECP2P51608 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.74■□□□□ 0.91
MECP2P51608 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MECP2P51608 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MECP2P51608 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MECP2P51608 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
MECP2P51608 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MECP2P51608 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.73■□□□□ 0.91
MECP2P51608 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MECP2P51608 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MECP2P51608 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.73■□□□□ 0.91
MECP2P51608 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MECP2P51608 AL391121.1-201ENST00000607967 1349 ntBASIC20.73■□□□□ 0.91
MECP2P51608 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MECP2P51608 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MECP2P51608 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
MECP2P51608 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MECP2P51608 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MECP2P51608 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MECP2P51608 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MECP2P51608 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MECP2P51608 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MECP2P51608 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
MECP2P51608 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.71■□□□□ 0.91
MECP2P51608 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MECP2P51608 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MECP2P51608 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.71■□□□□ 0.91
MECP2P51608 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.7■□□□□ 0.91
MECP2P51608 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
MECP2P51608 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MECP2P51608 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
MECP2P51608 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MECP2P51608 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.7■□□□□ 0.9
MECP2P51608 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.7■□□□□ 0.9
MECP2P51608 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MECP2P51608 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.69■□□□□ 0.9
MECP2P51608 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MECP2P51608 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
MECP2P51608 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MECP2P51608 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MECP2P51608 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MECP2P51608 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MECP2P51608 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MECP2P51608 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MECP2P51608 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.68■□□□□ 0.9
MECP2P51608 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MECP2P51608 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MECP2P51608 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MECP2P51608 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MECP2P51608 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MECP2P51608 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.67■□□□□ 0.9
MECP2P51608 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MECP2P51608 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MECP2P51608 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MECP2P51608 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MECP2P51608 LINC00543-201ENST00000567234 1845 ntBASIC20.67■□□□□ 0.9
MECP2P51608 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.67■□□□□ 0.9
MECP2P51608 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MECP2P51608 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MECP2P51608 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.66■□□□□ 0.9
MECP2P51608 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.66■□□□□ 0.9
MECP2P51608 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MECP2P51608 AC138932.3-201ENST00000567634 1902 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms