RNA–Protein interactions for RNA: ENST00000393786.7

SRPK3-205, Transcript of SRSF protein kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRPK3, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3-205ENST00000393786 NISCHQ9Y2I1 1504 aa52.03■■■■■ 5.92
SRPK3-205ENST00000393786 CCDC180Q9P1Z9 1646 aa44.95■■■■■ 4.79
SRPK3-205ENST00000393786 ZCCHC6Q5VYS8 1495 aaKnown RBP43.83■■■■■ 4.61
SRPK3-205ENST00000393786 SHROOM4Q9ULL8 1493 aa43.05■■■■■ 4.48
SRPK3-205ENST00000393786 DCAF1Q9Y4B6 1507 aa42.95■■■■■ 4.47
SRPK3-205ENST00000393786 DCAF8L2P0C7V8 631 aa42.86■■■■■ 4.45
SRPK3-205ENST00000393786 MYO15BQ96JP2 1530 aa42.16■■■■■ 4.34
SRPK3-205ENST00000393786 ABCC9O60706 1549 aa42.02■■■■■ 4.32
SRPK3-205ENST00000393786 SUPT5HO00267 1087 aaKnown RBP41.77■■■■■ 4.28
SRPK3-205ENST00000393786 NACADO15069 1562 aa41.73■■■■■ 4.27
SRPK3-205ENST00000393786 SCRIBQ14160 1630 aa41.55■■■■■ 4.24
SRPK3-205ENST00000393786 RB1CC1Q8TDY2 1594 aa41.21■■■■■ 4.19
SRPK3-205ENST00000393786 RSF1Q96T23 1441 aaPredicted RBP40.67■■■■■ 4.1
SRPK3-205ENST00000393786 UNC13AQ9UPW8 1703 aa40.49■■■■■ 4.07
SRPK3-205ENST00000393786 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
SRPK3-205ENST00000393786 CHIC1Q5VXU3 224 aa40.34■■■■■ 4.05
SRPK3-205ENST00000393786 MROH2BQ7Z745 1585 aa40.27■■■■■ 4.04
SRPK3-205ENST00000393786 BAZ1AQ9NRL2 1556 aaPredicted RBP40.08■■■■■ 4.01
SRPK3-205ENST00000393786 BICRAQ9NZM4 1560 aa40.04■■■■■ 4
SRPK3-205ENST00000393786 WIZO95785 1651 aa39.99■■■■□ 3.99
SRPK3-205ENST00000393786 SMARCA4P51532 1647 aa39.84■■■■□ 3.97
SRPK3-205ENST00000393786 PABPN1Q86U42 306 aaKnown RBP eCLIP39.83■■■■□ 3.97
SRPK3-205ENST00000393786 TOP2AP11388 1531 aaKnown RBP39.51■■■■□ 3.92
SRPK3-205ENST00000393786 PEG3Q9GZU2 1588 aa39.29■■■■□ 3.88
SRPK3-205ENST00000393786 SMARCA2P51531 1590 aa39.2■■■■□ 3.87
SRPK3-205ENST00000393786 CCDC88BA6NC98 1476 aa39.18■■■■□ 3.86
SRPK3-205ENST00000393786 TRIM41Q8WV44 630 aa39.16■■■■□ 3.86
SRPK3-205ENST00000393786 EIF4G1Q04637 1599 aaKnown RBP39.16■■■■□ 3.86
SRPK3-205ENST00000393786 ATAD2BQ9ULI0 1458 aa39.03■■■■□ 3.84
SRPK3-205ENST00000393786 LOC105371045A0A1W2PR82 267 aa38.89■■■■□ 3.82
SRPK3-205ENST00000393786 BAZ1BQ9UIG0 1483 aaKnown RBP38.83■■■■□ 3.81
SRPK3-205ENST00000393786 ABCC8Q09428 1581 aa38.62■■■■□ 3.77
SRPK3-205ENST00000393786 NCAPD3P42695 1498 aa38.55■■■■□ 3.76
SRPK3-205ENST00000393786 FAM9AQ8IZU1 332 aaPredicted RBP38.55■■■■□ 3.76
SRPK3-205ENST00000393786 HMGXB3Q12766 1538 aa38.52■■■■□ 3.76
SRPK3-205ENST00000393786 WRNQ14191 1432 aaPredicted RBP eCLIP38.23■■■■□ 3.71
SRPK3-205ENST00000393786 SYNJ1O43426 1573 aa38.07■■■■□ 3.68
SRPK3-205ENST00000393786 SOGA1O94964 1423 aa38.05■■■■□ 3.68
SRPK3-205ENST00000393786 EHMT2Q96KQ7 1210 aa38.02■■■■□ 3.68
SRPK3-205ENST00000393786 CC2D2AQ9P2K1 1620 aa38.01■■■■□ 3.68
SRPK3-205ENST00000393786 EEA1Q15075 1411 aa37.99■■■■□ 3.67
SRPK3-205ENST00000393786 CFTRP13569 1480 aa37.9■■■■□ 3.66
SRPK3-205ENST00000393786 RUSC2Q8N2Y8 1516 aa37.89■■■■□ 3.66
SRPK3-205ENST00000393786 TOP2BQ02880 1626 aa37.83■■■■□ 3.65
SRPK3-205ENST00000393786 CSRNP3Q8WYN3 585 aa37.81■■■■□ 3.64
SRPK3-205ENST00000393786 PCGF6Q9BYE7 350 aa37.81■■■■□ 3.64
SRPK3-205ENST00000393786 BIVM-ERCC5R4GMW8 1640 aa37.76■■■■□ 3.64
SRPK3-205ENST00000393786 PRDM2Q13029 1718 aa37.7■■■■□ 3.63
SRPK3-205ENST00000393786 CADPSQ9ULU8 1353 aa37.64■■■■□ 3.62
SRPK3-205ENST00000393786 CUX1P39880 1505 aa37.59■■■■□ 3.61
SRPK3-205ENST00000393786 TRIM26Q12899 539 aaPredicted RBP37.58■■■■□ 3.61
SRPK3-205ENST00000393786 TNIKQ9UKE5 1360 aa37.58■■■■□ 3.61
SRPK3-205ENST00000393786 GOLGA3Q08378 1498 aa37.54■■■■□ 3.6
SRPK3-205ENST00000393786 KIF21BO75037 1637 aa37.49■■■■□ 3.59
SRPK3-205ENST00000393786 CEP164Q9UPV0 1460 aa37.47■■■■□ 3.59
SRPK3-205ENST00000393786 CEP162Q5TB80 1403 aa37.44■■■■□ 3.58
SRPK3-205ENST00000393786 UBTFP17480 764 aaKnown RBP37.41■■■■□ 3.58
SRPK3-205ENST00000393786 HRCP23327 699 aa37.26■■■■□ 3.56
SRPK3-205ENST00000393786 FANCD2Q9BXW9 1451 aa37.23■■■■□ 3.55
SRPK3-205ENST00000393786 RAPGEF2Q9Y4G8 1499 aa37.22■■■■□ 3.55
SRPK3-205ENST00000393786 KIF27Q86VH2 1401 aa37.18■■■■□ 3.54
SRPK3-205ENST00000393786 NESP48681 1621 aa37.15■■■■□ 3.54
SRPK3-205ENST00000393786 PRXQ9BXM0 1461 aa37.13■■■■□ 3.53
SRPK3-205ENST00000393786 ERICH3Q5RHP9 1530 aa37.1■■■■□ 3.53
SRPK3-205ENST00000393786 LAMC3Q9Y6N6 1575 aa37.1■■■■□ 3.53
SRPK3-205ENST00000393786 FGD5Q6ZNL6 1462 aa37.06■■■■□ 3.52
SRPK3-205ENST00000393786 PPARGC1BQ86YN6 1023 aaKnown RBP37.02■■■■□ 3.52
SRPK3-205ENST00000393786 DNAJC5BQ9UF47 199 aa37■■■■□ 3.51
SRPK3-205ENST00000393786 DNMBPQ6XZF7 1577 aa36.99■■■■□ 3.51
SRPK3-205ENST00000393786 CLIP1P30622 1438 aa36.99■■■■□ 3.51
SRPK3-205ENST00000393786 CUX2O14529 1486 aa36.96■■■■□ 3.51
SRPK3-205ENST00000393786 TOPBP1Q92547 1522 aa36.9■■■■□ 3.5
SRPK3-205ENST00000393786 IGF1RP08069 1367 aa36.84■■■■□ 3.49
SRPK3-205ENST00000393786 PDS5BQ9NTI5 1447 aa36.8■■■■□ 3.48
SRPK3-205ENST00000393786 POLA1P09884 1462 aaPredicted RBP36.79■■■■□ 3.48
SRPK3-205ENST00000393786 VPS8Q8N3P4 1428 aa36.75■■■■□ 3.47
SRPK3-205ENST00000393786 URB2Q14146 1524 aaKnown RBP36.74■■■■□ 3.47
SRPK3-205ENST00000393786 ABCA10Q8WWZ4 1543 aa36.73■■■■□ 3.47
SRPK3-205ENST00000393786 RAD54L2Q9Y4B4 1467 aa36.72■■■■□ 3.47
SRPK3-205ENST00000393786 RANGAP1P46060 587 aaPredicted RBP36.65■■■■□ 3.46
SRPK3-205ENST00000393786 KIF21AQ7Z4S6 1674 aa36.65■■■■□ 3.46
SRPK3-205ENST00000393786 CARMIL1Q5VZK9 1371 aa36.65■■■■□ 3.46
SRPK3-205ENST00000393786 TTBK1Q5TCY1 1321 aaPredicted RBP36.56■■■■□ 3.44
SRPK3-205ENST00000393786 ARAP1Q96P48 1450 aa36.56■■■■□ 3.44
SRPK3-205ENST00000393786 WDR97A6NE52 1622 aa36.53■■■■□ 3.44
SRPK3-205ENST00000393786 ARHGAP35Q9NRY4 1499 aa36.42■■■■□ 3.42
SRPK3-205ENST00000393786 APLP2Q06481 763 aa36.4■■■■□ 3.42
SRPK3-205ENST00000393786 CUL7Q14999 1698 aa36.4■■■■□ 3.42
SRPK3-205ENST00000393786 ZEB1P37275 1124 aaPredicted RBP36.38■■■■□ 3.41
SRPK3-205ENST00000393786 ABCA5Q8WWZ7 1642 aa36.37■■■■□ 3.41
SRPK3-205ENST00000393786 TDRD9Q8NDG6 1382 aaKnown RBP36.3■■■■□ 3.4
SRPK3-205ENST00000393786 TARBP1Q13395 1621 aaKnown RBP36.29■■■■□ 3.4
SRPK3-205ENST00000393786 MRC2Q9UBG0 1479 aa36.29■■■■□ 3.4
SRPK3-205ENST00000393786 GAPVD1Q14C86 1478 aa36.28■■■■□ 3.4
SRPK3-205ENST00000393786 CTTNBP2Q8WZ74 1663 aa36.12■■■■□ 3.37
SRPK3-205ENST00000393786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.08■■■■□ 3.37
SRPK3-205ENST00000393786 WDR62O43379 1518 aa36.08■■■■□ 3.37
SRPK3-205ENST00000393786 KANK4Q5T7N3 995 aaPredicted RBP36.05■■■■□ 3.36
SRPK3-205ENST00000393786 EFCAB5A4FU69 1503 aa36.01■■■■□ 3.36
SRPK3-205ENST00000393786 PBRM1Q86U86 1689 aa36■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms