Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPDEFO95238 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.58■□□□□ 0.88
SPDEFO95238 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SPDEFO95238 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPDEFO95238 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPDEFO95238 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SPDEFO95238 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.57■□□□□ 0.88
SPDEFO95238 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPDEFO95238 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPDEFO95238 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPDEFO95238 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPDEFO95238 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.56■□□□□ 0.88
SPDEFO95238 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SPDEFO95238 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.55■□□□□ 0.88
SPDEFO95238 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPDEFO95238 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.55■□□□□ 0.88
SPDEFO95238 LINC00273-201ENST00000539813 1452 ntBASIC20.55■□□□□ 0.88
SPDEFO95238 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPDEFO95238 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SPDEFO95238 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPDEFO95238 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPDEFO95238 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPDEFO95238 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPDEFO95238 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPDEFO95238 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SPDEFO95238 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.54■□□□□ 0.88
SPDEFO95238 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPDEFO95238 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPDEFO95238 DUSP8P4-201ENST00000399538 1761 ntBASIC20.54■□□□□ 0.88
SPDEFO95238 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.54■□□□□ 0.88
SPDEFO95238 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.53■□□□□ 0.88
SPDEFO95238 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPDEFO95238 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPDEFO95238 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPDEFO95238 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPDEFO95238 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SPDEFO95238 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPDEFO95238 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.53■□□□□ 0.88
SPDEFO95238 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.53■□□□□ 0.88
SPDEFO95238 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPDEFO95238 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPDEFO95238 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SPDEFO95238 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPDEFO95238 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPDEFO95238 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.52■□□□□ 0.88
SPDEFO95238 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPDEFO95238 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SPDEFO95238 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPDEFO95238 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
SPDEFO95238 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDEFO95238 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDEFO95238 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.51■□□□□ 0.87
SPDEFO95238 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.51■□□□□ 0.87
SPDEFO95238 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SPDEFO95238 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDEFO95238 AC135983.2-203ENST00000454486 1613 ntBASIC20.51■□□□□ 0.87
SPDEFO95238 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDEFO95238 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.51■□□□□ 0.87
SPDEFO95238 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPDEFO95238 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDEFO95238 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDEFO95238 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.5■□□□□ 0.87
SPDEFO95238 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDEFO95238 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDEFO95238 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.5■□□□□ 0.87
SPDEFO95238 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDEFO95238 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDEFO95238 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDEFO95238 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.49■□□□□ 0.87
SPDEFO95238 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.49■□□□□ 0.87
SPDEFO95238 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.49■□□□□ 0.87
SPDEFO95238 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPDEFO95238 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
SPDEFO95238 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPDEFO95238 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPDEFO95238 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.48■□□□□ 0.87
SPDEFO95238 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPDEFO95238 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SPDEFO95238 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SPDEFO95238 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SPDEFO95238 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPDEFO95238 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.48■□□□□ 0.87
SPDEFO95238 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SPDEFO95238 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SPDEFO95238 ERN1-208ENST00000606895 2068 ntBASIC20.47■□□□□ 0.87
SPDEFO95238 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.47■□□□□ 0.87
SPDEFO95238 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDEFO95238 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.47■□□□□ 0.87
SPDEFO95238 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.47■□□□□ 0.87
SPDEFO95238 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPDEFO95238 AC092803.2-201ENST00000564287 1899 ntBASIC20.47■□□□□ 0.87
SPDEFO95238 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.47■□□□□ 0.87
SPDEFO95238 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.46■□□□□ 0.87
SPDEFO95238 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPDEFO95238 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPDEFO95238 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.46■□□□□ 0.87
SPDEFO95238 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPDEFO95238 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPDEFO95238 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPDEFO95238 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms