RNA–Protein interactions for RNA: ENST00000295992.7

PCOLCE2-201, Transcript of procollagen C-endopeptidase enhancer 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE2, Length 2,021 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE2-201ENST00000295992 NISCHQ9Y2I1 1504 aa50.99■■■■■ 5.75
PCOLCE2-201ENST00000295992 CCDC180Q9P1Z9 1646 aa44.89■■■■■ 4.78
PCOLCE2-201ENST00000295992 ABCC9O60706 1549 aa43.2■■■■■ 4.51
PCOLCE2-201ENST00000295992 ZCCHC6Q5VYS8 1495 aaKnown RBP42.64■■■■■ 4.42
PCOLCE2-201ENST00000295992 DCAF8L2P0C7V8 631 aa42.32■■■■■ 4.37
PCOLCE2-201ENST00000295992 DCAF1Q9Y4B6 1507 aa42.2■■■■■ 4.35
PCOLCE2-201ENST00000295992 MYO15BQ96JP2 1530 aa42.06■■■■■ 4.32
PCOLCE2-201ENST00000295992 NACADO15069 1562 aa42.04■■■■■ 4.32
PCOLCE2-201ENST00000295992 RB1CC1Q8TDY2 1594 aa41.87■■■■■ 4.29
PCOLCE2-201ENST00000295992 SCRIBQ14160 1630 aa41.09■■■■■ 4.17
PCOLCE2-201ENST00000295992 SHROOM4Q9ULL8 1493 aa41.03■■■■■ 4.16
PCOLCE2-201ENST00000295992 UNC13AQ9UPW8 1703 aa40.96■■■■■ 4.15
PCOLCE2-201ENST00000295992 BICRAQ9NZM4 1560 aa40.62■■■■■ 4.09
PCOLCE2-201ENST00000295992 PABPN1Q86U42 306 aaKnown RBP eCLIP40.56■■■■■ 4.08
PCOLCE2-201ENST00000295992 SUPT5HO00267 1087 aaKnown RBP40.17■■■■■ 4.02
PCOLCE2-201ENST00000295992 CECR2Q9BXF3 1484 aa39.67■■■■□ 3.94
PCOLCE2-201ENST00000295992 EIF4G1Q04637 1599 aaKnown RBP39.47■■■■□ 3.91
PCOLCE2-201ENST00000295992 BAZ1AQ9NRL2 1556 aaPredicted RBP39.44■■■■□ 3.9
PCOLCE2-201ENST00000295992 SMARCA4P51532 1647 aa39.37■■■■□ 3.89
PCOLCE2-201ENST00000295992 MROH2BQ7Z745 1585 aa39.33■■■■□ 3.89
PCOLCE2-201ENST00000295992 CHIC1Q5VXU3 224 aa39.28■■■■□ 3.88
PCOLCE2-201ENST00000295992 RSF1Q96T23 1441 aaPredicted RBP39.2■■■■□ 3.87
PCOLCE2-201ENST00000295992 CC2D2AQ9P2K1 1620 aa39.1■■■■□ 3.85
PCOLCE2-201ENST00000295992 PEG3Q9GZU2 1588 aa38.97■■■■□ 3.83
PCOLCE2-201ENST00000295992 ATAD2BQ9ULI0 1458 aa38.96■■■■□ 3.83
PCOLCE2-201ENST00000295992 DNAJC5BQ9UF47 199 aa38.96■■■■□ 3.83
PCOLCE2-201ENST00000295992 WIZO95785 1651 aa38.95■■■■□ 3.83
PCOLCE2-201ENST00000295992 SMARCA2P51531 1590 aa38.92■■■■□ 3.82
PCOLCE2-201ENST00000295992 NCAPD3P42695 1498 aa38.81■■■■□ 3.8
PCOLCE2-201ENST00000295992 BAZ1BQ9UIG0 1483 aaKnown RBP38.67■■■■□ 3.78
PCOLCE2-201ENST00000295992 HMGXB3Q12766 1538 aa38.66■■■■□ 3.78
PCOLCE2-201ENST00000295992 TOP2AP11388 1531 aaKnown RBP38.55■■■■□ 3.76
PCOLCE2-201ENST00000295992 CCDC88BA6NC98 1476 aa38.14■■■■□ 3.7
PCOLCE2-201ENST00000295992 HRCP23327 699 aa37.99■■■■□ 3.67
PCOLCE2-201ENST00000295992 LOC105371045A0A1W2PR82 267 aa37.94■■■■□ 3.66
PCOLCE2-201ENST00000295992 PCGF6Q9BYE7 350 aa37.8■■■■□ 3.64
PCOLCE2-201ENST00000295992 CADPSQ9ULU8 1353 aa37.73■■■■□ 3.63
PCOLCE2-201ENST00000295992 CFTRP13569 1480 aa37.68■■■■□ 3.62
PCOLCE2-201ENST00000295992 NESP48681 1621 aa37.65■■■■□ 3.62
PCOLCE2-201ENST00000295992 LAMC3Q9Y6N6 1575 aa37.62■■■■□ 3.61
PCOLCE2-201ENST00000295992 TRIM41Q8WV44 630 aa37.53■■■■□ 3.6
PCOLCE2-201ENST00000295992 PRDM2Q13029 1718 aa37.4■■■■□ 3.58
PCOLCE2-201ENST00000295992 PDS5BQ9NTI5 1447 aa37.36■■■■□ 3.57
PCOLCE2-201ENST00000295992 FANCD2Q9BXW9 1451 aa37.29■■■■□ 3.56
PCOLCE2-201ENST00000295992 TRIM26Q12899 539 aaPredicted RBP37.29■■■■□ 3.56
PCOLCE2-201ENST00000295992 KIF21AQ7Z4S6 1674 aa37.19■■■■□ 3.54
PCOLCE2-201ENST00000295992 CEP164Q9UPV0 1460 aa37.15■■■■□ 3.54
PCOLCE2-201ENST00000295992 ERCC6Q03468 1493 aa37.15■■■■□ 3.54
PCOLCE2-201ENST00000295992 FAM9AQ8IZU1 332 aaPredicted RBP37.05■■■■□ 3.52
PCOLCE2-201ENST00000295992 PPARGC1BQ86YN6 1023 aaKnown RBP37.01■■■■□ 3.52
PCOLCE2-201ENST00000295992 ABCC8Q09428 1581 aa37■■■■□ 3.51
PCOLCE2-201ENST00000295992 MRC2Q9UBG0 1479 aa36.92■■■■□ 3.5
PCOLCE2-201ENST00000295992 WRNQ14191 1432 aaPredicted RBP eCLIP36.92■■■■□ 3.5
PCOLCE2-201ENST00000295992 URB2Q14146 1524 aaKnown RBP36.88■■■■□ 3.49
PCOLCE2-201ENST00000295992 THOC2Q8NI27 1593 aaKnown RBP36.85■■■■□ 3.49
PCOLCE2-201ENST00000295992 CUX1P39880 1505 aa36.84■■■■□ 3.49
PCOLCE2-201ENST00000295992 DNMBPQ6XZF7 1577 aa36.8■■■■□ 3.48
PCOLCE2-201ENST00000295992 TOPBP1Q92547 1522 aa36.79■■■■□ 3.48
PCOLCE2-201ENST00000295992 SYNJ1O43426 1573 aa36.78■■■■□ 3.48
PCOLCE2-201ENST00000295992 WDR62O43379 1518 aa36.77■■■■□ 3.48
PCOLCE2-201ENST00000295992 TOP2BQ02880 1626 aa36.73■■■■□ 3.47
PCOLCE2-201ENST00000295992 BIVM-ERCC5R4GMW8 1640 aa36.7■■■■□ 3.47
PCOLCE2-201ENST00000295992 FGD5Q6ZNL6 1462 aa36.57■■■■□ 3.45
PCOLCE2-201ENST00000295992 EHMT2Q96KQ7 1210 aa36.57■■■■□ 3.44
PCOLCE2-201ENST00000295992 POLA1P09884 1462 aaPredicted RBP36.55■■■■□ 3.44
PCOLCE2-201ENST00000295992 ZEB1P37275 1124 aaPredicted RBP36.5■■■■□ 3.43
PCOLCE2-201ENST00000295992 CUX2O14529 1486 aa36.45■■■■□ 3.43
PCOLCE2-201ENST00000295992 SOGA1O94964 1423 aa36.42■■■■□ 3.42
PCOLCE2-201ENST00000295992 RAD54L2Q9Y4B4 1467 aa36.4■■■■□ 3.42
PCOLCE2-201ENST00000295992 IFT140Q96RY7 1462 aa36.33■■■■□ 3.41
PCOLCE2-201ENST00000295992 TARBP1Q13395 1621 aaKnown RBP36.33■■■■□ 3.41
PCOLCE2-201ENST00000295992 EEA1Q15075 1411 aa36.28■■■■□ 3.4
PCOLCE2-201ENST00000295992 ABCA10Q8WWZ4 1543 aa36.25■■■■□ 3.39
PCOLCE2-201ENST00000295992 WDR97A6NE52 1622 aa36.2■■■■□ 3.39
PCOLCE2-201ENST00000295992 ZNF608Q9ULD9 1512 aaPredicted RBP36.14■■■■□ 3.38
PCOLCE2-201ENST00000295992 TNIKQ9UKE5 1360 aa36.14■■■■□ 3.38
PCOLCE2-201ENST00000295992 TDRD9Q8NDG6 1382 aaKnown RBP36.13■■■■□ 3.37
PCOLCE2-201ENST00000295992 CEP162Q5TB80 1403 aa36.13■■■■□ 3.37
PCOLCE2-201ENST00000295992 RUSC2Q8N2Y8 1516 aa36.11■■■■□ 3.37
PCOLCE2-201ENST00000295992 KIF27Q86VH2 1401 aa36.07■■■■□ 3.36
PCOLCE2-201ENST00000295992 AQRO60306 1485 aaKnown RBP eCLIP36.06■■■■□ 3.36
PCOLCE2-201ENST00000295992 ABCA5Q8WWZ7 1642 aa36.02■■■■□ 3.36
PCOLCE2-201ENST00000295992 CSRNP3Q8WYN3 585 aa36.01■■■■□ 3.36
PCOLCE2-201ENST00000295992 GAPVD1Q14C86 1478 aa36■■■■□ 3.35
PCOLCE2-201ENST00000295992 EIF4G3O43432 1585 aaKnown RBP36■■■■□ 3.35
PCOLCE2-201ENST00000295992 GOLGA3Q08378 1498 aa35.95■■■■□ 3.35
PCOLCE2-201ENST00000295992 KIF21BO75037 1637 aa35.87■■■■□ 3.33
PCOLCE2-201ENST00000295992 GRIN2BQ13224 1484 aa35.86■■■■□ 3.33
PCOLCE2-201ENST00000295992 IGF1RP08069 1367 aa35.85■■■■□ 3.33
PCOLCE2-201ENST00000295992 PBRM1Q86U86 1689 aa35.84■■■■□ 3.33
PCOLCE2-201ENST00000295992 ERICH3Q5RHP9 1530 aa35.82■■■■□ 3.33
PCOLCE2-201ENST00000295992 SNAPC4Q5SXM2 1469 aa35.71■■■■□ 3.31
PCOLCE2-201ENST00000295992 UBTFP17480 764 aaKnown RBP35.69■■■■□ 3.3
PCOLCE2-201ENST00000295992 MAGI1Q96QZ7 1491 aaPredicted RBP35.67■■■■□ 3.3
PCOLCE2-201ENST00000295992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.65■■■■□ 3.3
PCOLCE2-201ENST00000295992 CARMIL1Q5VZK9 1371 aa35.64■■■■□ 3.3
PCOLCE2-201ENST00000295992 CUL7Q14999 1698 aa35.64■■■■□ 3.3
PCOLCE2-201ENST00000295992 ADAMTS12P58397 1594 aa35.61■■■■□ 3.29
PCOLCE2-201ENST00000295992 PRXQ9BXM0 1461 aa35.61■■■■□ 3.29
PCOLCE2-201ENST00000295992 FHAD1B1AJZ9 1412 aa35.6■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms