RNA–Protein interactions for RNA: ENST00000333039.2

NPTXR-201, Transcript of neuronal pentraxin receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPTXR, Length 5,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTXR-201ENST00000333039 DCAF8L2P0C7V8 631 aa37.93■■■■□ 3.66
NPTXR-201ENST00000333039 SUPT5HO00267 1087 aaKnown RBP36.15■■■■□ 3.38
NPTXR-201ENST00000333039 NISCHQ9Y2I1 1504 aa36.11■■■■□ 3.37
NPTXR-201ENST00000333039 SHROOM4Q9ULL8 1493 aa35.52■■■■□ 3.28
NPTXR-201ENST00000333039 EHMT2Q96KQ7 1210 aa35.08■■■■□ 3.21
NPTXR-201ENST00000333039 PELP1Q8IZL8 1130 aaKnown RBP34.49■■■■□ 3.11
NPTXR-201ENST00000333039 APLP2Q06481 763 aa34.44■■■■□ 3.1
NPTXR-201ENST00000333039 FAM9AQ8IZU1 332 aaPredicted RBP34.13■■■■□ 3.05
NPTXR-201ENST00000333039 TTBK1Q5TCY1 1321 aaPredicted RBP33.93■■■■□ 3.02
NPTXR-201ENST00000333039 PCGF6Q9BYE7 350 aa33.88■■■■□ 3.01
NPTXR-201ENST00000333039 RANGAP1P46060 587 aaPredicted RBP33.52■■■□□ 2.96
NPTXR-201ENST00000333039 TRIM41Q8WV44 630 aa33.49■■■□□ 2.95
NPTXR-201ENST00000333039 ZEB1P37275 1124 aaPredicted RBP33.4■■■□□ 2.94
NPTXR-201ENST00000333039 CCER1Q8TC90 406 aaPredicted RBP33.33■■■□□ 2.93
NPTXR-201ENST00000333039 CENPBP07199 599 aaPredicted RBP33.33■■■□□ 2.93
NPTXR-201ENST00000333039 ATP1B4Q9UN42 357 aaPredicted RBP33.22■■■□□ 2.91
NPTXR-201ENST00000333039 UBTFP17480 764 aaKnown RBP33.11■■■□□ 2.89
NPTXR-201ENST00000333039 ERICH6Q7L0X2 663 aa33.1■■■□□ 2.89
NPTXR-201ENST00000333039 YTHDC1Q96MU7 727 aaKnown RBP32.68■■■□□ 2.82
NPTXR-201ENST00000333039 NEFLP07196 543 aa32.64■■■□□ 2.82
NPTXR-201ENST00000333039 PPARGC1BQ86YN6 1023 aaKnown RBP32.62■■■□□ 2.81
NPTXR-201ENST00000333039 TRIM26Q12899 539 aaPredicted RBP32.45■■■□□ 2.78
NPTXR-201ENST00000333039 ITGAEP38570 1179 aa32.12■■■□□ 2.73
NPTXR-201ENST00000333039 HRCP23327 699 aa32.07■■■□□ 2.72
NPTXR-201ENST00000333039 LOC105371045A0A1W2PR82 267 aa32.04■■■□□ 2.72
NPTXR-201ENST00000333039 MYT1Q01538 1121 aa31.99■■■□□ 2.71
NPTXR-201ENST00000333039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.99■■■□□ 2.71
NPTXR-201ENST00000333039 HNRNPUL2Q1KMD3 747 aaKnown RBP31.99■■■□□ 2.71
NPTXR-201ENST00000333039 CHIC1Q5VXU3 224 aa31.95■■■□□ 2.71
NPTXR-201ENST00000333039 POLR3GLQ9BT43 218 aa31.92■■■□□ 2.7
NPTXR-201ENST00000333039 MYT1LQ9UL68 1186 aa31.9■■■□□ 2.7
NPTXR-201ENST00000333039 DAXXQ9UER7 740 aaPredicted RBP31.7■■■□□ 2.67
NPTXR-201ENST00000333039 CNGB1Q14028 1251 aaPredicted RBP31.58■■■□□ 2.65
NPTXR-201ENST00000333039 DIEXFQ68CQ4 756 aaKnown RBP31.36■■■□□ 2.61
NPTXR-201ENST00000333039 FAM50AQ14320 339 aaKnown RBP31.32■■■□□ 2.6
NPTXR-201ENST00000333039 SLC4A1APQ9BWU0 796 aaKnown RBP31.3■■■□□ 2.6
NPTXR-201ENST00000333039 TRIM52Q96A61 297 aa31.15■■■□□ 2.58
NPTXR-201ENST00000333039 PABPN1Q86U42 306 aaKnown RBP eCLIP31.14■■■□□ 2.57
NPTXR-201ENST00000333039 ABCC9O60706 1549 aa31.12■■■□□ 2.57
NPTXR-201ENST00000333039 NEUROD1Q13562 356 aa31.07■■■□□ 2.56
NPTXR-201ENST00000333039 CLSPNQ9HAW4 1339 aa31.02■■■□□ 2.56
NPTXR-201ENST00000333039 ZNF316A6NFI3 1004 aaPredicted RBP31.01■■■□□ 2.55
NPTXR-201ENST00000333039 RTL5Q5HYW3 569 aaPredicted RBP30.95■■■□□ 2.55
NPTXR-201ENST00000333039 ANP32CO43423 234 aa30.8■■■□□ 2.52
NPTXR-201ENST00000333039 ZNF326Q5BKZ1 582 aaKnown RBP30.79■■■□□ 2.52
NPTXR-201ENST00000333039 BCANQ96GW7 911 aa30.77■■■□□ 2.52
NPTXR-201ENST00000333039 GTF3C3Q9Y5Q9 886 aa30.7■■■□□ 2.51
NPTXR-201ENST00000333039 FBLN2P98095 1184 aa30.62■■■□□ 2.49
NPTXR-201ENST00000333039 CDK11AQ9UQ88 783 aaPredicted RBP30.54■■■□□ 2.48
NPTXR-201ENST00000333039 P3H3Q8IVL6 736 aa30.49■■■□□ 2.47
NPTXR-201ENST00000333039 CSRNP3Q8WYN3 585 aa30.45■■■□□ 2.47
NPTXR-201ENST00000333039 ZBTB47Q9UFB7 747 aaPredicted RBP30.43■■■□□ 2.46
NPTXR-201ENST00000333039 ARID3CA6NKF2 412 aa30.4■■■□□ 2.46
NPTXR-201ENST00000333039 CANXP27824 592 aaKnown RBP30.36■■■□□ 2.45
NPTXR-201ENST00000333039 ZNF777Q9ULD5 760 aaPredicted RBP30.25■■■□□ 2.43
NPTXR-201ENST00000333039 ACIN1Q9UKV3 1341 aaKnown RBP30.24■■■□□ 2.43
NPTXR-201ENST00000333039 SLC24A1O60721 1099 aa30.2■■■□□ 2.43
NPTXR-201ENST00000333039 NEFMP07197 916 aa30.19■■■□□ 2.42
NPTXR-201ENST00000333039 BCL11AQ9H165 835 aa30.17■■■□□ 2.42
NPTXR-201ENST00000333039 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
NPTXR-201ENST00000333039 ANP32AP39687 249 aaKnown RBP30.04■■■□□ 2.4
NPTXR-201ENST00000333039 TONSLQ96HA7 1378 aa30.01■■■□□ 2.4
NPTXR-201ENST00000333039 DCAF1Q9Y4B6 1507 aa29.93■■■□□ 2.38
NPTXR-201ENST00000333039 NPM2Q86SE8 214 aaKnown RBP29.92■■■□□ 2.38
NPTXR-201ENST00000333039 ZCCHC6Q5VYS8 1495 aaKnown RBP29.88■■■□□ 2.37
NPTXR-201ENST00000333039 FKBP8Q14318 412 aa29.88■■■□□ 2.37
NPTXR-201ENST00000333039 HNRNPUQ00839 825 aaKnown RBP eCLIP29.8■■■□□ 2.36
NPTXR-201ENST00000333039 CHGAP10645 457 aaKnown RBP29.79■■■□□ 2.36
NPTXR-201ENST00000333039 DDX10Q13206 875 aaKnown RBP29.79■■■□□ 2.36
NPTXR-201ENST00000333039 FAM9BQ8IZU0 186 aa29.76■■■□□ 2.36
NPTXR-201ENST00000333039 ESF1Q9H501 851 aaKnown RBP29.76■■■□□ 2.35
NPTXR-201ENST00000333039 STAG3Q9UJ98 1225 aa29.71■■■□□ 2.35
NPTXR-201ENST00000333039 CHIC2Q9UKJ5 165 aa29.7■■■□□ 2.35
NPTXR-201ENST00000333039 SALL2Q9Y467 1007 aaPredicted RBP29.6■■■□□ 2.33
NPTXR-201ENST00000333039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.59■■■□□ 2.33
NPTXR-201ENST00000333039 HSP90AA1P07900 732 aaKnown RBP29.56■■■□□ 2.32
NPTXR-201ENST00000333039 UPF2Q9HAU5 1272 aaKnown RBP29.56■■■□□ 2.32
NPTXR-201ENST00000333039 NPM1P06748 294 aaKnown RBP eCLIP29.55■■■□□ 2.32
NPTXR-201ENST00000333039 TMC1Q8TDI8 760 aa29.55■■■□□ 2.32
NPTXR-201ENST00000333039 ANP32BQ92688 251 aaKnown RBP29.5■■■□□ 2.31
NPTXR-201ENST00000333039 MTUS2Q5JR59 1369 aa29.49■■■□□ 2.31
NPTXR-201ENST00000333039 PLPPR3Q6T4P5 718 aa29.48■■■□□ 2.31
NPTXR-201ENST00000333039 CCDC136Q96JN2 1154 aa29.46■■■□□ 2.31
NPTXR-201ENST00000333039 WDR43Q15061 677 aaKnown RBP eCLIP29.45■■■□□ 2.31
NPTXR-201ENST00000333039 KDM2AQ9Y2K7 1162 aa29.45■■■□□ 2.3
NPTXR-201ENST00000333039 CLIP1P30622 1438 aa29.44■■■□□ 2.3
NPTXR-201ENST00000333039 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.44■■■□□ 2.3
NPTXR-201ENST00000333039 TSPY4P0CV99 314 aa29.44■■■□□ 2.3
NPTXR-201ENST00000333039 TSPY10P0CW01 314 aa29.44■■■□□ 2.3
NPTXR-201ENST00000333039 MRS2Q9HD23 443 aa29.43■■■□□ 2.3
NPTXR-201ENST00000333039 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
NPTXR-201ENST00000333039 MIER1Q8N108 512 aa29.34■■■□□ 2.29
NPTXR-201ENST00000333039 HIRIP3Q9BW71 556 aaPredicted RBP29.31■■■□□ 2.28
NPTXR-201ENST00000333039 CHMP7Q8WUX9 453 aaPredicted RBP29.29■■■□□ 2.28
NPTXR-201ENST00000333039 RRP7BPQ9NSQ0 103 aa29.25■■■□□ 2.27
NPTXR-201ENST00000333039 EIF4G2P78344 907 aaKnown RBP eCLIP29.25■■■□□ 2.276e-6■■■■■ 27.4
NPTXR-201ENST00000333039 GOLGA3Q08378 1498 aa29.24■■■□□ 2.27
NPTXR-201ENST00000333039 IRX6P78412 446 aaPredicted RBP29.24■■■□□ 2.27
NPTXR-201ENST00000333039 NBR1Q14596 966 aa29.23■■■□□ 2.27
NPTXR-201ENST00000333039 EIF5BO60841 1220 aaKnown RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms