Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 AL445228.2-201ENST00000605589 952 ntBASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 AC124864.1-201ENST00000623408 392 ntBASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 AC097374.2-201ENST00000618617 1306 ntBASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 IER3-202ENST00000376377 1350 ntBASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGC3Q9UN70 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 LINC00896-202ENST00000609602 2128 ntBASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 IGHV3-41-201ENST00000613121 348 ntBASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 AP000550.4-202ENST00000639755 178 ntBASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 PCDHB18P-201ENST00000524813 2368 ntBASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGC3Q9UN70 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PCDHGC3Q9UN70 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
PCDHGC3Q9UN70 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHGC3Q9UN70 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHGC3Q9UN70 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHGC3Q9UN70 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 MIR1224-201ENST00000408193 85 ntBASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 LETM1P2-201ENST00000597330 2178 ntBASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGC3Q9UN70 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 AC246785.2-201ENST00000432512 513 ntBASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC3Q9UN70 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms