Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC005082.1-201ENST00000413042 2259 ntBASIC22.05■■□□□ 1.12
PDE6BP35913 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.05■■□□□ 1.12
PDE6BP35913 NCF1C-201ENST00000438382 1427 ntBASIC22.05■■□□□ 1.12
PDE6BP35913 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
PDE6BP35913 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE6BP35913 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE6BP35913 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.04■■□□□ 1.12
PDE6BP35913 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.04■■□□□ 1.12
PDE6BP35913 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC22.04■■□□□ 1.12
PDE6BP35913 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.04■■□□□ 1.12
PDE6BP35913 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PDE6BP35913 CEND1P1-201ENST00000451006 455 ntBASIC22.04■■□□□ 1.12
PDE6BP35913 RPS15P9-201ENST00000494093 319 ntBASIC22.04■■□□□ 1.12
PDE6BP35913 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.04■■□□□ 1.12
PDE6BP35913 AL078644.1-201ENST00000609881 752 ntBASIC22.04■■□□□ 1.12
PDE6BP35913 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
PDE6BP35913 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PDE6BP35913 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PDE6BP35913 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.04■■□□□ 1.12
PDE6BP35913 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDE6BP35913 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDE6BP35913 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
PDE6BP35913 GPR89P-201ENST00000407924 1495 ntBASIC22.03■■□□□ 1.12
PDE6BP35913 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PDE6BP35913 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.03■■□□□ 1.12
PDE6BP35913 AC073130.3-201ENST00000624389 2278 ntBASIC22.03■■□□□ 1.12
PDE6BP35913 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PDE6BP35913 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDE6BP35913 FAM8A3P-201ENST00000427218 844 ntBASIC22.03■■□□□ 1.12
PDE6BP35913 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.03■■□□□ 1.12
PDE6BP35913 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.03■■□□□ 1.12
PDE6BP35913 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDE6BP35913 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.03■■□□□ 1.12
PDE6BP35913 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDE6BP35913 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDE6BP35913 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC22.03■■□□□ 1.12
PDE6BP35913 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
PDE6BP35913 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDE6BP35913 AL353593.2-201ENST00000602529 1483 ntBASIC22.03■■□□□ 1.12
PDE6BP35913 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.02■■□□□ 1.12
PDE6BP35913 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PDE6BP35913 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDE6BP35913 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.02■■□□□ 1.12
PDE6BP35913 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDE6BP35913 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDE6BP35913 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDE6BP35913 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDE6BP35913 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDE6BP35913 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDE6BP35913 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.02■■□□□ 1.12
PDE6BP35913 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.02■■□□□ 1.12
PDE6BP35913 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
PDE6BP35913 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.02■■□□□ 1.12
PDE6BP35913 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.02■■□□□ 1.12
PDE6BP35913 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.02■■□□□ 1.12
PDE6BP35913 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.02■■□□□ 1.12
PDE6BP35913 AC004790.2-201ENST00000623588 572 ntBASIC22.02■■□□□ 1.12
PDE6BP35913 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC22.02■■□□□ 1.12
PDE6BP35913 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDE6BP35913 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDE6BP35913 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
PDE6BP35913 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PDE6BP35913 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
PDE6BP35913 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
PDE6BP35913 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PDE6BP35913 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.01■■□□□ 1.11
PDE6BP35913 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDE6BP35913 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PDE6BP35913 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDE6BP35913 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
PDE6BP35913 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
PDE6BP35913 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDE6BP35913 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDE6BP35913 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDE6BP35913 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.01■■□□□ 1.11
PDE6BP35913 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDE6BP35913 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.01■■□□□ 1.11
PDE6BP35913 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PDE6BP35913 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PDE6BP35913 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.01■■□□□ 1.11
PDE6BP35913 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.01■■□□□ 1.11
PDE6BP35913 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDE6BP35913 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDE6BP35913 MIR770-201ENST00000390219 98 ntBASIC22■■□□□ 1.11
PDE6BP35913 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22■■□□□ 1.11
PDE6BP35913 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
PDE6BP35913 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22■■□□□ 1.11
PDE6BP35913 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms