RNA–Protein interactions for RNA: ENST00000263245.9

ARFGAP3-201, Transcript of ADP ribosylation factor GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGAP3, Length 2,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3-201ENST00000263245 NISCHQ9Y2I1 1504 aa41.4■■■■■ 4.22
ARFGAP3-201ENST00000263245 SHROOM4Q9ULL8 1493 aa36.15■■■■□ 3.38
ARFGAP3-201ENST00000263245 SUPT5HO00267 1087 aaKnown RBP35.67■■■■□ 3.3
ARFGAP3-201ENST00000263245 ZCCHC6Q5VYS8 1495 aaKnown RBP35.07■■■■□ 3.2
ARFGAP3-201ENST00000263245 DCAF8L2P0C7V8 631 aa34.78■■■■□ 3.16
ARFGAP3-201ENST00000263245 MYO15BQ96JP2 1530 aa34.73■■■■□ 3.15
ARFGAP3-201ENST00000263245 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
ARFGAP3-201ENST00000263245 CHIC1Q5VXU3 224 aa34.71■■■■□ 3.15
ARFGAP3-201ENST00000263245 HRCP23327 699 aa34.45■■■■□ 3.1
ARFGAP3-201ENST00000263245 PCGF6Q9BYE7 350 aa34.3■■■■□ 3.08
ARFGAP3-201ENST00000263245 PPARGC1BQ86YN6 1023 aaKnown RBP33.93■■■■□ 3.02
ARFGAP3-201ENST00000263245 LOC105371045A0A1W2PR82 267 aa33.92■■■■□ 3.02
ARFGAP3-201ENST00000263245 DCAF1Q9Y4B6 1507 aa33.71■■■□□ 2.99
ARFGAP3-201ENST00000263245 TRIM26Q12899 539 aaPredicted RBP33.31■■■□□ 2.92
ARFGAP3-201ENST00000263245 ABCC9O60706 1549 aa33.17■■■□□ 2.9
ARFGAP3-201ENST00000263245 RSF1Q96T23 1441 aaPredicted RBP33.05■■■□□ 2.88
ARFGAP3-201ENST00000263245 TRIM41Q8WV44 630 aa33.03■■■□□ 2.88
ARFGAP3-201ENST00000263245 FAM9AQ8IZU1 332 aaPredicted RBP33.03■■■□□ 2.88
ARFGAP3-201ENST00000263245 SCRIBQ14160 1630 aa33.02■■■□□ 2.88
ARFGAP3-201ENST00000263245 EHMT2Q96KQ7 1210 aa32.93■■■□□ 2.86
ARFGAP3-201ENST00000263245 RB1CC1Q8TDY2 1594 aa32.81■■■□□ 2.84
ARFGAP3-201ENST00000263245 ZEB1P37275 1124 aaPredicted RBP32.66■■■□□ 2.82
ARFGAP3-201ENST00000263245 CECR2Q9BXF3 1484 aa32.47■■■□□ 2.79
ARFGAP3-201ENST00000263245 MROH2BQ7Z745 1585 aa32.33■■■□□ 2.77
ARFGAP3-201ENST00000263245 WIZO95785 1651 aa32.19■■■□□ 2.74
ARFGAP3-201ENST00000263245 SCAF1Q9H7N4 1312 aaKnown RBP32.15■■■□□ 2.74
ARFGAP3-201ENST00000263245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.12■■■□□ 2.73
ARFGAP3-201ENST00000263245 NACADO15069 1562 aa32.09■■■□□ 2.73
ARFGAP3-201ENST00000263245 CCER1Q8TC90 406 aaPredicted RBP31.99■■■□□ 2.71
ARFGAP3-201ENST00000263245 TTBK1Q5TCY1 1321 aaPredicted RBP31.95■■■□□ 2.71
ARFGAP3-201ENST00000263245 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
ARFGAP3-201ENST00000263245 EIF4G1Q04637 1599 aaKnown RBP31.76■■■□□ 2.68
ARFGAP3-201ENST00000263245 ABCC8Q09428 1581 aa31.74■■■□□ 2.67
ARFGAP3-201ENST00000263245 PELP1Q8IZL8 1130 aaKnown RBP31.73■■■□□ 2.67
ARFGAP3-201ENST00000263245 CCDC88BA6NC98 1476 aa31.7■■■□□ 2.66
ARFGAP3-201ENST00000263245 NEUROD1Q13562 356 aa31.62■■■□□ 2.65
ARFGAP3-201ENST00000263245 ACIN1Q9UKV3 1341 aaKnown RBP31.59■■■□□ 2.65
ARFGAP3-201ENST00000263245 DIEXFQ68CQ4 756 aaKnown RBP31.58■■■□□ 2.65
ARFGAP3-201ENST00000263245 CEP162Q5TB80 1403 aa31.57■■■□□ 2.64
ARFGAP3-201ENST00000263245 SOGA1O94964 1423 aa31.56■■■□□ 2.64
ARFGAP3-201ENST00000263245 TOP2AP11388 1531 aaKnown RBP31.52■■■□□ 2.64
ARFGAP3-201ENST00000263245 WRNQ14191 1432 aaPredicted RBP eCLIP31.48■■■□□ 2.63
ARFGAP3-201ENST00000263245 UBTFP17480 764 aaKnown RBP31.46■■■□□ 2.63
ARFGAP3-201ENST00000263245 SMARCA2P51531 1590 aa31.43■■■□□ 2.62
ARFGAP3-201ENST00000263245 SMARCA4P51532 1647 aa31.41■■■□□ 2.62
ARFGAP3-201ENST00000263245 RUSC2Q8N2Y8 1516 aa31.41■■■□□ 2.62
ARFGAP3-201ENST00000263245 CSRNP3Q8WYN3 585 aa31.39■■■□□ 2.61
ARFGAP3-201ENST00000263245 TNIKQ9UKE5 1360 aa31.38■■■□□ 2.61
ARFGAP3-201ENST00000263245 GTF3C3Q9Y5Q9 886 aa31.35■■■□□ 2.61
ARFGAP3-201ENST00000263245 CENPBP07199 599 aaPredicted RBP31.29■■■□□ 2.6
ARFGAP3-201ENST00000263245 EEA1Q15075 1411 aa31.16■■■□□ 2.58
ARFGAP3-201ENST00000263245 ZNF316A6NFI3 1004 aaPredicted RBP31.15■■■□□ 2.58
ARFGAP3-201ENST00000263245 PABPN1Q86U42 306 aaKnown RBP eCLIP31.14■■■□□ 2.58
ARFGAP3-201ENST00000263245 HNRNPUL2Q1KMD3 747 aaKnown RBP31.13■■■□□ 2.57
ARFGAP3-201ENST00000263245 UNC13AQ9UPW8 1703 aa31.12■■■□□ 2.57
ARFGAP3-201ENST00000263245 GOLGA3Q08378 1498 aa31.11■■■□□ 2.57
ARFGAP3-201ENST00000263245 YTHDC1Q96MU7 727 aaKnown RBP31.07■■■□□ 2.57
ARFGAP3-201ENST00000263245 RANGAP1P46060 587 aaPredicted RBP30.98■■■□□ 2.55
ARFGAP3-201ENST00000263245 MIER1Q8N108 512 aa30.89■■■□□ 2.54
ARFGAP3-201ENST00000263245 CLIP1P30622 1438 aa30.87■■■□□ 2.53
ARFGAP3-201ENST00000263245 CEP164Q9UPV0 1460 aa30.86■■■□□ 2.53
ARFGAP3-201ENST00000263245 SYNJ1O43426 1573 aa30.86■■■□□ 2.53
ARFGAP3-201ENST00000263245 APLP2Q06481 763 aa30.79■■■□□ 2.52
ARFGAP3-201ENST00000263245 BICRAQ9NZM4 1560 aa30.74■■■□□ 2.51
ARFGAP3-201ENST00000263245 VPS8Q8N3P4 1428 aa30.73■■■□□ 2.51
ARFGAP3-201ENST00000263245 KIF21BO75037 1637 aa30.72■■■□□ 2.51
ARFGAP3-201ENST00000263245 RAPGEF2Q9Y4G8 1499 aa30.72■■■□□ 2.51
ARFGAP3-201ENST00000263245 PEG3Q9GZU2 1588 aa30.63■■■□□ 2.49
ARFGAP3-201ENST00000263245 ATAD2BQ9ULI0 1458 aa30.56■■■□□ 2.48
ARFGAP3-201ENST00000263245 BAZ1BQ9UIG0 1483 aaKnown RBP30.54■■■□□ 2.48
ARFGAP3-201ENST00000263245 KANK4Q5T7N3 995 aaPredicted RBP30.39■■■□□ 2.46
ARFGAP3-201ENST00000263245 DHX57Q6P158 1386 aaKnown RBP30.35■■■□□ 2.45
ARFGAP3-201ENST00000263245 TOP2BQ02880 1626 aa30.31■■■□□ 2.44
ARFGAP3-201ENST00000263245 ARAP1Q96P48 1450 aa30.27■■■□□ 2.44
ARFGAP3-201ENST00000263245 PRXQ9BXM0 1461 aa30.21■■■□□ 2.43
ARFGAP3-201ENST00000263245 CLSPNQ9HAW4 1339 aa30.2■■■□□ 2.43
ARFGAP3-201ENST00000263245 ITGAEP38570 1179 aa30.2■■■□□ 2.43
ARFGAP3-201ENST00000263245 ERICH3Q5RHP9 1530 aa30.14■■■□□ 2.41
ARFGAP3-201ENST00000263245 MYT1Q01538 1121 aa30.13■■■□□ 2.41
ARFGAP3-201ENST00000263245 BIVM-ERCC5R4GMW8 1640 aa30.12■■■□□ 2.41
ARFGAP3-201ENST00000263245 RRBP1Q9P2E9 1410 aaKnown RBP30.04■■■□□ 2.4
ARFGAP3-201ENST00000263245 CUX1P39880 1505 aa30.03■■■□□ 2.4
ARFGAP3-201ENST00000263245 SUPT16HQ9Y5B9 1047 aaKnown RBP30.02■■■□□ 2.4
ARFGAP3-201ENST00000263245 KIF27Q86VH2 1401 aa30■■■□□ 2.39
ARFGAP3-201ENST00000263245 CCNB3Q8WWL7 1395 aa30■■■□□ 2.39
ARFGAP3-201ENST00000263245 ARHGAP35Q9NRY4 1499 aa29.94■■■□□ 2.38
ARFGAP3-201ENST00000263245 KCNH8Q96L42 1107 aa29.91■■■□□ 2.38
ARFGAP3-201ENST00000263245 CUX2O14529 1486 aa29.85■■■□□ 2.37
ARFGAP3-201ENST00000263245 RAB3GAP2Q9H2M9 1393 aa29.85■■■□□ 2.37
ARFGAP3-201ENST00000263245 NCAPD3P42695 1498 aa29.79■■■□□ 2.36
ARFGAP3-201ENST00000263245 CFTRP13569 1480 aa29.73■■■□□ 2.35
ARFGAP3-201ENST00000263245 HMGXB3Q12766 1538 aa29.73■■■□□ 2.35
ARFGAP3-201ENST00000263245 SIN3AQ96ST3 1273 aa29.72■■■□□ 2.35
ARFGAP3-201ENST00000263245 MAPKBP1O60336 1514 aa29.72■■■□□ 2.35
ARFGAP3-201ENST00000263245 FAM50AQ14320 339 aaKnown RBP29.71■■■□□ 2.35
ARFGAP3-201ENST00000263245 IGF1RP08069 1367 aa29.7■■■□□ 2.34
ARFGAP3-201ENST00000263245 DDX10Q13206 875 aaKnown RBP29.68■■■□□ 2.34
ARFGAP3-201ENST00000263245 ATP1B4Q9UN42 357 aaPredicted RBP29.68■■■□□ 2.34
ARFGAP3-201ENST00000263245 P3H3Q8IVL6 736 aa29.67■■■□□ 2.34
ARFGAP3-201ENST00000263245 TSHZ2Q9NRE2 1034 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms