RNA–Protein interactions for RNA: ENST00000429602.6

SIMC1-203, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-203ENST00000429602 NISCHQ9Y2I1 1504 aa41.77■■■■■ 4.28
SIMC1-203ENST00000429602 SHROOM4Q9ULL8 1493 aa35.76■■■■□ 3.31
SIMC1-203ENST00000429602 CCDC180Q9P1Z9 1646 aa35.41■■■■□ 3.26
SIMC1-203ENST00000429602 ZCCHC6Q5VYS8 1495 aaKnown RBP35.33■■■■□ 3.25
SIMC1-203ENST00000429602 SUPT5HO00267 1087 aaKnown RBP35.05■■■■□ 3.2
SIMC1-203ENST00000429602 DCAF8L2P0C7V8 631 aa34.83■■■■□ 3.17
SIMC1-203ENST00000429602 DCAF1Q9Y4B6 1507 aa34.2■■■■□ 3.06
SIMC1-203ENST00000429602 CHIC1Q5VXU3 224 aa34.01■■■■□ 3.03
SIMC1-203ENST00000429602 MYO15BQ96JP2 1530 aa33.86■■■■□ 3.01
SIMC1-203ENST00000429602 SCRIBQ14160 1630 aa33.33■■■□□ 2.93
SIMC1-203ENST00000429602 ABCC9O60706 1549 aa33.31■■■□□ 2.92
SIMC1-203ENST00000429602 RSF1Q96T23 1441 aaPredicted RBP33.1■■■□□ 2.89
SIMC1-203ENST00000429602 LOC105371045A0A1W2PR82 267 aa33.05■■■□□ 2.88
SIMC1-203ENST00000429602 PCGF6Q9BYE7 350 aa32.96■■■□□ 2.87
SIMC1-203ENST00000429602 HRCP23327 699 aa32.88■■■□□ 2.85
SIMC1-203ENST00000429602 NACADO15069 1562 aa32.8■■■□□ 2.84
SIMC1-203ENST00000429602 RB1CC1Q8TDY2 1594 aa32.73■■■□□ 2.83
SIMC1-203ENST00000429602 CECR2Q9BXF3 1484 aa32.66■■■□□ 2.82
SIMC1-203ENST00000429602 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
SIMC1-203ENST00000429602 MROH2BQ7Z745 1585 aa32.52■■■□□ 2.8
SIMC1-203ENST00000429602 FAM9AQ8IZU1 332 aaPredicted RBP32.42■■■□□ 2.78
SIMC1-203ENST00000429602 WIZO95785 1651 aa32.31■■■□□ 2.76
SIMC1-203ENST00000429602 PPARGC1BQ86YN6 1023 aaKnown RBP32.3■■■□□ 2.76
SIMC1-203ENST00000429602 TRIM26Q12899 539 aaPredicted RBP32.27■■■□□ 2.76
SIMC1-203ENST00000429602 EHMT2Q96KQ7 1210 aa32.2■■■□□ 2.74
SIMC1-203ENST00000429602 BAZ1AQ9NRL2 1556 aaPredicted RBP32.07■■■□□ 2.72
SIMC1-203ENST00000429602 EIF4G1Q04637 1599 aaKnown RBP31.82■■■□□ 2.68
SIMC1-203ENST00000429602 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
SIMC1-203ENST00000429602 TOP2AP11388 1531 aaKnown RBP31.77■■■□□ 2.68
SIMC1-203ENST00000429602 UNC13AQ9UPW8 1703 aa31.76■■■□□ 2.67
SIMC1-203ENST00000429602 CCDC88BA6NC98 1476 aa31.7■■■□□ 2.67
SIMC1-203ENST00000429602 PABPN1Q86U42 306 aaKnown RBP eCLIP31.65■■■□□ 2.66
SIMC1-203ENST00000429602 ABCC8Q09428 1581 aa31.63■■■□□ 2.65
SIMC1-203ENST00000429602 SMARCA2P51531 1590 aa31.62■■■□□ 2.65
SIMC1-203ENST00000429602 ZEB1P37275 1124 aaPredicted RBP31.49■■■□□ 2.63
SIMC1-203ENST00000429602 BICRAQ9NZM4 1560 aa31.45■■■□□ 2.62
SIMC1-203ENST00000429602 SOGA1O94964 1423 aa31.36■■■□□ 2.61
SIMC1-203ENST00000429602 RUSC2Q8N2Y8 1516 aa31.2■■■□□ 2.59
SIMC1-203ENST00000429602 CEP162Q5TB80 1403 aa31.17■■■□□ 2.58
SIMC1-203ENST00000429602 CSRNP3Q8WYN3 585 aa31.17■■■□□ 2.58
SIMC1-203ENST00000429602 PEG3Q9GZU2 1588 aa31.15■■■□□ 2.58
SIMC1-203ENST00000429602 TTBK1Q5TCY1 1321 aaPredicted RBP31.14■■■□□ 2.58
SIMC1-203ENST00000429602 WRNQ14191 1432 aaPredicted RBP eCLIP31.09■■■□□ 2.57
SIMC1-203ENST00000429602 TNIKQ9UKE5 1360 aa31.09■■■□□ 2.57
SIMC1-203ENST00000429602 UBTFP17480 764 aaKnown RBP31.09■■■□□ 2.57
SIMC1-203ENST00000429602 EEA1Q15075 1411 aa31.08■■■□□ 2.57
SIMC1-203ENST00000429602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.08■■■□□ 2.57
SIMC1-203ENST00000429602 ATAD2BQ9ULI0 1458 aa31.04■■■□□ 2.56
SIMC1-203ENST00000429602 CCER1Q8TC90 406 aaPredicted RBP30.96■■■□□ 2.55
SIMC1-203ENST00000429602 BAZ1BQ9UIG0 1483 aaKnown RBP30.96■■■□□ 2.55
SIMC1-203ENST00000429602 GOLGA3Q08378 1498 aa30.92■■■□□ 2.54
SIMC1-203ENST00000429602 SYNJ1O43426 1573 aa30.91■■■□□ 2.54
SIMC1-203ENST00000429602 CEP164Q9UPV0 1460 aa30.74■■■□□ 2.51
SIMC1-203ENST00000429602 KIF21BO75037 1637 aa30.64■■■□□ 2.5
SIMC1-203ENST00000429602 CLIP1P30622 1438 aa30.61■■■□□ 2.49
SIMC1-203ENST00000429602 RAPGEF2Q9Y4G8 1499 aa30.58■■■□□ 2.49
SIMC1-203ENST00000429602 RANGAP1P46060 587 aaPredicted RBP30.56■■■□□ 2.48
SIMC1-203ENST00000429602 TOP2BQ02880 1626 aa30.49■■■□□ 2.47
SIMC1-203ENST00000429602 VPS8Q8N3P4 1428 aa30.44■■■□□ 2.46
SIMC1-203ENST00000429602 NCAPD3P42695 1498 aa30.41■■■□□ 2.46
SIMC1-203ENST00000429602 HNRNPUL2Q1KMD3 747 aaKnown RBP30.4■■■□□ 2.46
SIMC1-203ENST00000429602 HMGXB3Q12766 1538 aa30.36■■■□□ 2.45
SIMC1-203ENST00000429602 APLP2Q06481 763 aa30.35■■■□□ 2.45
SIMC1-203ENST00000429602 BIVM-ERCC5R4GMW8 1640 aa30.34■■■□□ 2.45
SIMC1-203ENST00000429602 DIEXFQ68CQ4 756 aaKnown RBP30.3■■■□□ 2.44
SIMC1-203ENST00000429602 SCAF1Q9H7N4 1312 aaKnown RBP30.29■■■□□ 2.44
SIMC1-203ENST00000429602 CUX1P39880 1505 aa30.26■■■□□ 2.43
SIMC1-203ENST00000429602 PRXQ9BXM0 1461 aa30.24■■■□□ 2.43
SIMC1-203ENST00000429602 CFTRP13569 1480 aa30.18■■■□□ 2.42
SIMC1-203ENST00000429602 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
SIMC1-203ENST00000429602 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
SIMC1-203ENST00000429602 ARAP1Q96P48 1450 aa30.09■■■□□ 2.41
SIMC1-203ENST00000429602 ZNF316A6NFI3 1004 aaPredicted RBP30.08■■■□□ 2.41
SIMC1-203ENST00000429602 NEUROD1Q13562 356 aa30.01■■■□□ 2.4
SIMC1-203ENST00000429602 KANK4Q5T7N3 995 aaPredicted RBP30.01■■■□□ 2.39
SIMC1-203ENST00000429602 ACIN1Q9UKV3 1341 aaKnown RBP30■■■□□ 2.39
SIMC1-203ENST00000429602 CADPSQ9ULU8 1353 aa29.87■■■□□ 2.37
SIMC1-203ENST00000429602 CUX2O14529 1486 aa29.87■■■□□ 2.37
SIMC1-203ENST00000429602 ARHGAP35Q9NRY4 1499 aa29.85■■■□□ 2.37
SIMC1-203ENST00000429602 IGF1RP08069 1367 aa29.82■■■□□ 2.36
SIMC1-203ENST00000429602 CENPBP07199 599 aaPredicted RBP29.82■■■□□ 2.36
SIMC1-203ENST00000429602 PRDM2Q13029 1718 aa29.75■■■□□ 2.35
SIMC1-203ENST00000429602 FGD5Q6ZNL6 1462 aa29.74■■■□□ 2.35
SIMC1-203ENST00000429602 DHX57Q6P158 1386 aaKnown RBP29.73■■■□□ 2.35
SIMC1-203ENST00000429602 RRBP1Q9P2E9 1410 aaKnown RBP29.71■■■□□ 2.35
SIMC1-203ENST00000429602 CARMIL1Q5VZK9 1371 aa29.7■■■□□ 2.34
SIMC1-203ENST00000429602 GTF3C3Q9Y5Q9 886 aa29.69■■■□□ 2.34
SIMC1-203ENST00000429602 MIER1Q8N108 512 aa29.68■■■□□ 2.34
SIMC1-203ENST00000429602 YTHDC1Q96MU7 727 aaKnown RBP29.66■■■□□ 2.34
SIMC1-203ENST00000429602 CC2D2AQ9P2K1 1620 aa29.66■■■□□ 2.34
SIMC1-203ENST00000429602 ITGAEP38570 1179 aa29.64■■■□□ 2.33
SIMC1-203ENST00000429602 CCNB3Q8WWL7 1395 aa29.63■■■□□ 2.33
SIMC1-203ENST00000429602 CLSPNQ9HAW4 1339 aa29.62■■■□□ 2.33
SIMC1-203ENST00000429602 FANCD2Q9BXW9 1451 aa29.59■■■□□ 2.33
SIMC1-203ENST00000429602 P3H3Q8IVL6 736 aa29.51■■■□□ 2.32
SIMC1-203ENST00000429602 RAD54L2Q9Y4B4 1467 aa29.48■■■□□ 2.31
SIMC1-203ENST00000429602 TIAM1Q13009 1591 aa29.47■■■□□ 2.31
SIMC1-203ENST00000429602 NESP48681 1621 aa29.44■■■□□ 2.3
SIMC1-203ENST00000429602 PELP1Q8IZL8 1130 aaKnown RBP29.43■■■□□ 2.3
SIMC1-203ENST00000429602 ATP1B4Q9UN42 357 aaPredicted RBP29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms