RNA–Protein interactions for RNA: ENST00000613626.4

CDK13-207, Transcript of cyclin dependent kinase 13, humanhuman

TSL 5 BASIC

Gene CDK13, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-207ENST00000613626 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
CDK13-207ENST00000613626 HRCP23327 699 aa33.06■■■□□ 2.88
CDK13-207ENST00000613626 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
CDK13-207ENST00000613626 PPARGC1BQ86YN6 1023 aaKnown RBP32.75■■■□□ 2.83
CDK13-207ENST00000613626 PCGF6Q9BYE7 350 aa32.42■■■□□ 2.78
CDK13-207ENST00000613626 PELP1Q8IZL8 1130 aaKnown RBP32.34■■■□□ 2.77
CDK13-207ENST00000613626 SUPT5HO00267 1087 aaKnown RBP32.27■■■□□ 2.76
CDK13-207ENST00000613626 DCAF8L2P0C7V8 631 aa32.23■■■□□ 2.75
CDK13-207ENST00000613626 ZCCHC6Q5VYS8 1495 aaKnown RBP31.95■■■□□ 2.71
CDK13-207ENST00000613626 CCDC180Q9P1Z9 1646 aa31.84■■■□□ 2.69
CDK13-207ENST00000613626 MYO15BQ96JP2 1530 aa31.79■■■□□ 2.68
CDK13-207ENST00000613626 SCAF1Q9H7N4 1312 aaKnown RBP31.7■■■□□ 2.67
CDK13-207ENST00000613626 CHIC1Q5VXU3 224 aa31.43■■■□□ 2.62
CDK13-207ENST00000613626 MYT1Q01538 1121 aa31.09■■■□□ 2.57
CDK13-207ENST00000613626 LOC105371045A0A1W2PR82 267 aa31.04■■■□□ 2.56
CDK13-207ENST00000613626 TRIM26Q12899 539 aaPredicted RBP30.94■■■□□ 2.54
CDK13-207ENST00000613626 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
CDK13-207ENST00000613626 ZEB1P37275 1124 aaPredicted RBP30.69■■■□□ 2.5
CDK13-207ENST00000613626 NEUROD1Q13562 356 aa30.69■■■□□ 2.5
CDK13-207ENST00000613626 ACIN1Q9UKV3 1341 aaKnown RBP30.65■■■□□ 2.5
CDK13-207ENST00000613626 GTF3C3Q9Y5Q9 886 aa30.59■■■□□ 2.49
CDK13-207ENST00000613626 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
CDK13-207ENST00000613626 ABCC9O60706 1549 aa30.26■■■□□ 2.44
CDK13-207ENST00000613626 EHMT2Q96KQ7 1210 aa30.16■■■□□ 2.42
CDK13-207ENST00000613626 CENPBP07199 599 aaPredicted RBP30.15■■■□□ 2.42
CDK13-207ENST00000613626 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
CDK13-207ENST00000613626 FAM9AQ8IZU1 332 aaPredicted RBP29.96■■■□□ 2.39
CDK13-207ENST00000613626 DIEXFQ68CQ4 756 aaKnown RBP29.94■■■□□ 2.38
CDK13-207ENST00000613626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.9■■■□□ 2.38
CDK13-207ENST00000613626 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
CDK13-207ENST00000613626 YTHDC1Q96MU7 727 aaKnown RBP29.83■■■□□ 2.37
CDK13-207ENST00000613626 CECR2Q9BXF3 1484 aa29.82■■■□□ 2.36
CDK13-207ENST00000613626 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
CDK13-207ENST00000613626 CCER1Q8TC90 406 aaPredicted RBP29.76■■■□□ 2.36
CDK13-207ENST00000613626 NACADO15069 1562 aa29.61■■■□□ 2.33
CDK13-207ENST00000613626 MROH2BQ7Z745 1585 aa29.59■■■□□ 2.33
CDK13-207ENST00000613626 BCL11AQ9H165 835 aa29.53■■■□□ 2.32
CDK13-207ENST00000613626 WIZO95785 1651 aa29.41■■■□□ 2.3
CDK13-207ENST00000613626 TTBK1Q5TCY1 1321 aaPredicted RBP29.29■■■□□ 2.28
CDK13-207ENST00000613626 MIER1Q8N108 512 aa29.2■■■□□ 2.27
CDK13-207ENST00000613626 PABPN1Q86U42 306 aaKnown RBP eCLIP29.19■■■□□ 2.26
CDK13-207ENST00000613626 ZNF316A6NFI3 1004 aaPredicted RBP29.15■■■□□ 2.26
CDK13-207ENST00000613626 ANP32EQ9BTT0 268 aa29.14■■■□□ 2.25
CDK13-207ENST00000613626 CSRNP3Q8WYN3 585 aa29.01■■■□□ 2.23
CDK13-207ENST00000613626 BAZ1AQ9NRL2 1556 aaPredicted RBP29■■■□□ 2.23
CDK13-207ENST00000613626 TSHZ2Q9NRE2 1034 aa28.91■■■□□ 2.22
CDK13-207ENST00000613626 SUPT16HQ9Y5B9 1047 aaKnown RBP28.89■■■□□ 2.21
CDK13-207ENST00000613626 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
CDK13-207ENST00000613626 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
CDK13-207ENST00000613626 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
CDK13-207ENST00000613626 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
CDK13-207ENST00000613626 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
CDK13-207ENST00000613626 EIF4G1Q04637 1599 aaKnown RBP28.71■■■□□ 2.19
CDK13-207ENST00000613626 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
CDK13-207ENST00000613626 SOGA1O94964 1423 aa28.65■■■□□ 2.18
CDK13-207ENST00000613626 PRKCSHP14314 528 aaPredicted RBP28.63■■■□□ 2.17
CDK13-207ENST00000613626 RUSC2Q8N2Y8 1516 aa28.55■■■□□ 2.16
CDK13-207ENST00000613626 BCANQ96GW7 911 aa28.55■■■□□ 2.16
CDK13-207ENST00000613626 BICRAQ9NZM4 1560 aa28.53■■■□□ 2.16
CDK13-207ENST00000613626 UBTFP17480 764 aaKnown RBP28.53■■■□□ 2.16
CDK13-207ENST00000613626 HNRNPUL2Q1KMD3 747 aaKnown RBP28.4■■■□□ 2.14
CDK13-207ENST00000613626 CEP162Q5TB80 1403 aa28.36■■■□□ 2.13
CDK13-207ENST00000613626 RANGAP1P46060 587 aaPredicted RBP28.34■■■□□ 2.13
CDK13-207ENST00000613626 CLSPNQ9HAW4 1339 aa28.34■■■□□ 2.13
CDK13-207ENST00000613626 WRNQ14191 1432 aaPredicted RBP eCLIP28.27■■■□□ 2.12
CDK13-207ENST00000613626 TNIKQ9UKE5 1360 aa28.2■■■□□ 2.11
CDK13-207ENST00000613626 ATAD2BQ9ULI0 1458 aa28.2■■■□□ 2.1
CDK13-207ENST00000613626 RBM19Q9Y4C8 960 aaKnown RBP28.19■■■□□ 2.1
CDK13-207ENST00000613626 FKBP8Q14318 412 aa28.15■■■□□ 2.1
CDK13-207ENST00000613626 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
CDK13-207ENST00000613626 KCNH8Q96L42 1107 aa28.11■■■□□ 2.09
CDK13-207ENST00000613626 SYNJ1O43426 1573 aa28.09■■■□□ 2.09
CDK13-207ENST00000613626 ITGAEP38570 1179 aa28.07■■■□□ 2.08
CDK13-207ENST00000613626 PEG3Q9GZU2 1588 aa28.05■■■□□ 2.08
CDK13-207ENST00000613626 MSH5O43196 834 aa28.04■■■□□ 2.08
CDK13-207ENST00000613626 EEA1Q15075 1411 aa28.04■■■□□ 2.08
CDK13-207ENST00000613626 GOLGA3Q08378 1498 aa28.03■■■□□ 2.08
CDK13-207ENST00000613626 RAPGEF2Q9Y4G8 1499 aa27.87■■■□□ 2.05
CDK13-207ENST00000613626 CLIP1P30622 1438 aa27.85■■■□□ 2.05
CDK13-207ENST00000613626 CEP164Q9UPV0 1460 aa27.85■■■□□ 2.05
CDK13-207ENST00000613626 ERICH6Q7L0X2 663 aa27.84■■■□□ 2.05
CDK13-207ENST00000613626 ANO8Q9HCE9 1232 aaPredicted RBP27.79■■■□□ 2.04
CDK13-207ENST00000613626 NEFLP07196 543 aa27.76■■■□□ 2.03
CDK13-207ENST00000613626 APLP2Q06481 763 aa27.74■■■□□ 2.03
CDK13-207ENST00000613626 DEKP35659 375 aaKnown RBP27.67■■■□□ 2.02
CDK13-207ENST00000613626 KIF21BO75037 1637 aa27.65■■■□□ 2.02
CDK13-207ENST00000613626 TRIM52Q96A61 297 aa27.62■■■□□ 2.01
CDK13-207ENST00000613626 VPS8Q8N3P4 1428 aa27.62■■■□□ 2.01
CDK13-207ENST00000613626 TOP2BQ02880 1626 aa27.58■■■□□ 2.01
CDK13-207ENST00000613626 NCAPD3P42695 1498 aa27.55■■■□□ 2
CDK13-207ENST00000613626 KANK4Q5T7N3 995 aaPredicted RBP27.51■■□□□ 1.99
CDK13-207ENST00000613626 DHX57Q6P158 1386 aaKnown RBP27.5■■□□□ 1.99
CDK13-207ENST00000613626 CUX1P39880 1505 aa27.5■■□□□ 1.99
CDK13-207ENST00000613626 IRX6P78412 446 aaPredicted RBP27.49■■□□□ 1.99
CDK13-207ENST00000613626 DDX10Q13206 875 aaKnown RBP27.48■■□□□ 1.99
CDK13-207ENST00000613626 SALL2Q9Y467 1007 aaPredicted RBP27.47■■□□□ 1.99
CDK13-207ENST00000613626 FANCIQ9NVI1 1328 aa27.46■■□□□ 1.99
CDK13-207ENST00000613626 CCDC136Q96JN2 1154 aa27.45■■□□□ 1.98
CDK13-207ENST00000613626 NBR1Q14596 966 aa27.43■■□□□ 1.98
CDK13-207ENST00000613626 PRXQ9BXM0 1461 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms