RNA–Protein interactions for RNA: ENST00000546344.5

ARMC6-220, Transcript of armadillo repeat containing 6, humanhuman

TSL 2 BASIC

Gene ARMC6, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARMC6-220ENST00000546344 NISCHQ9Y2I1 1504 aa42.06■■■■■ 4.32
ARMC6-220ENST00000546344 CCDC180Q9P1Z9 1646 aa36.27■■■■□ 3.4
ARMC6-220ENST00000546344 ZCCHC6Q5VYS8 1495 aaKnown RBP35.5■■■■□ 3.27
ARMC6-220ENST00000546344 SHROOM4Q9ULL8 1493 aa34.87■■■■□ 3.17
ARMC6-220ENST00000546344 DCAF1Q9Y4B6 1507 aa34.74■■■■□ 3.15
ARMC6-220ENST00000546344 DCAF8L2P0C7V8 631 aa34.46■■■■□ 3.11
ARMC6-220ENST00000546344 MYO15BQ96JP2 1530 aa34.05■■■■□ 3.04
ARMC6-220ENST00000546344 SUPT5HO00267 1087 aaKnown RBP33.86■■■■□ 3.01
ARMC6-220ENST00000546344 ABCC9O60706 1549 aa33.74■■■□□ 2.99
ARMC6-220ENST00000546344 NACADO15069 1562 aa33.62■■■□□ 2.97
ARMC6-220ENST00000546344 SCRIBQ14160 1630 aa33.53■■■□□ 2.96
ARMC6-220ENST00000546344 RB1CC1Q8TDY2 1594 aa33.15■■■□□ 2.9
ARMC6-220ENST00000546344 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
ARMC6-220ENST00000546344 CHIC1Q5VXU3 224 aa32.82■■■□□ 2.84
ARMC6-220ENST00000546344 CECR2Q9BXF3 1484 aa32.69■■■□□ 2.82
ARMC6-220ENST00000546344 MROH2BQ7Z745 1585 aa32.56■■■□□ 2.8
ARMC6-220ENST00000546344 UNC13AQ9UPW8 1703 aa32.56■■■□□ 2.8
ARMC6-220ENST00000546344 BAZ1AQ9NRL2 1556 aaPredicted RBP32.38■■■□□ 2.77
ARMC6-220ENST00000546344 WIZO95785 1651 aa32.32■■■□□ 2.76
ARMC6-220ENST00000546344 BICRAQ9NZM4 1560 aa32.25■■■□□ 2.75
ARMC6-220ENST00000546344 SMARCA4P51532 1647 aa32.17■■■□□ 2.74
ARMC6-220ENST00000546344 PABPN1Q86U42 306 aaKnown RBP eCLIP31.99■■■□□ 2.71
ARMC6-220ENST00000546344 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
ARMC6-220ENST00000546344 EIF4G1Q04637 1599 aaKnown RBP31.81■■■□□ 2.68
ARMC6-220ENST00000546344 PEG3Q9GZU2 1588 aa31.75■■■□□ 2.67
ARMC6-220ENST00000546344 TRIM41Q8WV44 630 aa31.75■■■□□ 2.67
ARMC6-220ENST00000546344 SMARCA2P51531 1590 aa31.72■■■□□ 2.67
ARMC6-220ENST00000546344 CCDC88BA6NC98 1476 aa31.69■■■□□ 2.66
ARMC6-220ENST00000546344 LOC105371045A0A1W2PR82 267 aa31.61■■■□□ 2.65
ARMC6-220ENST00000546344 ATAD2BQ9ULI0 1458 aa31.48■■■□□ 2.63
ARMC6-220ENST00000546344 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
ARMC6-220ENST00000546344 ABCC8Q09428 1581 aa31.28■■■□□ 2.6
ARMC6-220ENST00000546344 FAM9AQ8IZU1 332 aaPredicted RBP31.24■■■□□ 2.59
ARMC6-220ENST00000546344 HMGXB3Q12766 1538 aa31.07■■■□□ 2.57
ARMC6-220ENST00000546344 NCAPD3P42695 1498 aa31.07■■■□□ 2.56
ARMC6-220ENST00000546344 WRNQ14191 1432 aaPredicted RBP eCLIP30.94■■■□□ 2.54
ARMC6-220ENST00000546344 PCGF6Q9BYE7 350 aa30.89■■■□□ 2.53
ARMC6-220ENST00000546344 SOGA1O94964 1423 aa30.85■■■□□ 2.53
ARMC6-220ENST00000546344 SYNJ1O43426 1573 aa30.83■■■□□ 2.53
ARMC6-220ENST00000546344 EEA1Q15075 1411 aa30.83■■■□□ 2.53
ARMC6-220ENST00000546344 EHMT2Q96KQ7 1210 aa30.79■■■□□ 2.52
ARMC6-220ENST00000546344 RUSC2Q8N2Y8 1516 aa30.71■■■□□ 2.51
ARMC6-220ENST00000546344 TRIM26Q12899 539 aaPredicted RBP30.67■■■□□ 2.5
ARMC6-220ENST00000546344 CSRNP3Q8WYN3 585 aa30.63■■■□□ 2.49
ARMC6-220ENST00000546344 HRCP23327 699 aa30.61■■■□□ 2.49
ARMC6-220ENST00000546344 TOP2BQ02880 1626 aa30.6■■■□□ 2.49
ARMC6-220ENST00000546344 CFTRP13569 1480 aa30.59■■■□□ 2.49
ARMC6-220ENST00000546344 BIVM-ERCC5R4GMW8 1640 aa30.55■■■□□ 2.48
ARMC6-220ENST00000546344 CC2D2AQ9P2K1 1620 aa30.53■■■□□ 2.48
ARMC6-220ENST00000546344 TNIKQ9UKE5 1360 aa30.53■■■□□ 2.48
ARMC6-220ENST00000546344 GOLGA3Q08378 1498 aa30.47■■■□□ 2.47
ARMC6-220ENST00000546344 CEP162Q5TB80 1403 aa30.44■■■□□ 2.46
ARMC6-220ENST00000546344 KIF21BO75037 1637 aa30.43■■■□□ 2.46
ARMC6-220ENST00000546344 CUX1P39880 1505 aa30.4■■■□□ 2.46
ARMC6-220ENST00000546344 CEP164Q9UPV0 1460 aa30.39■■■□□ 2.46
ARMC6-220ENST00000546344 PRDM2Q13029 1718 aa30.39■■■□□ 2.46
ARMC6-220ENST00000546344 CADPSQ9ULU8 1353 aa30.32■■■□□ 2.44
ARMC6-220ENST00000546344 UBTFP17480 764 aaKnown RBP30.27■■■□□ 2.44
ARMC6-220ENST00000546344 RAPGEF2Q9Y4G8 1499 aa30.18■■■□□ 2.42
ARMC6-220ENST00000546344 PRXQ9BXM0 1461 aa30.1■■■□□ 2.41
ARMC6-220ENST00000546344 ERICH3Q5RHP9 1530 aa30.09■■■□□ 2.41
ARMC6-220ENST00000546344 PPARGC1BQ86YN6 1023 aaKnown RBP30.07■■■□□ 2.4
ARMC6-220ENST00000546344 KIF27Q86VH2 1401 aa30.07■■■□□ 2.4
ARMC6-220ENST00000546344 CLIP1P30622 1438 aa30.02■■■□□ 2.4
ARMC6-220ENST00000546344 FANCD2Q9BXW9 1451 aa30■■■□□ 2.39
ARMC6-220ENST00000546344 FGD5Q6ZNL6 1462 aa29.93■■■□□ 2.38
ARMC6-220ENST00000546344 NESP48681 1621 aa29.89■■■□□ 2.37
ARMC6-220ENST00000546344 VPS8Q8N3P4 1428 aa29.87■■■□□ 2.37
ARMC6-220ENST00000546344 CUX2O14529 1486 aa29.86■■■□□ 2.37
ARMC6-220ENST00000546344 LAMC3Q9Y6N6 1575 aa29.85■■■□□ 2.37
ARMC6-220ENST00000546344 DNMBPQ6XZF7 1577 aa29.84■■■□□ 2.37
ARMC6-220ENST00000546344 IGF1RP08069 1367 aa29.78■■■□□ 2.36
ARMC6-220ENST00000546344 TOPBP1Q92547 1522 aa29.77■■■□□ 2.36
ARMC6-220ENST00000546344 ZEB1P37275 1124 aaPredicted RBP29.75■■■□□ 2.35
ARMC6-220ENST00000546344 POLA1P09884 1462 aaPredicted RBP29.69■■■□□ 2.34
ARMC6-220ENST00000546344 ARAP1Q96P48 1450 aa29.69■■■□□ 2.34
ARMC6-220ENST00000546344 ABCA10Q8WWZ4 1543 aa29.67■■■□□ 2.34
ARMC6-220ENST00000546344 DNAJC5BQ9UF47 199 aa29.67■■■□□ 2.34
ARMC6-220ENST00000546344 TTBK1Q5TCY1 1321 aaPredicted RBP29.67■■■□□ 2.34
ARMC6-220ENST00000546344 RAD54L2Q9Y4B4 1467 aa29.62■■■□□ 2.33
ARMC6-220ENST00000546344 URB2Q14146 1524 aaKnown RBP29.62■■■□□ 2.33
ARMC6-220ENST00000546344 CARMIL1Q5VZK9 1371 aa29.61■■■□□ 2.33
ARMC6-220ENST00000546344 RANGAP1P46060 587 aaPredicted RBP29.61■■■□□ 2.33
ARMC6-220ENST00000546344 PDS5BQ9NTI5 1447 aa29.59■■■□□ 2.33
ARMC6-220ENST00000546344 ARHGAP35Q9NRY4 1499 aa29.54■■■□□ 2.32
ARMC6-220ENST00000546344 WDR97A6NE52 1622 aa29.51■■■□□ 2.31
ARMC6-220ENST00000546344 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
ARMC6-220ENST00000546344 APLP2Q06481 763 aa29.47■■■□□ 2.31
ARMC6-220ENST00000546344 CUL7Q14999 1698 aa29.41■■■□□ 2.3
ARMC6-220ENST00000546344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.41■■■□□ 2.3
ARMC6-220ENST00000546344 ABCA5Q8WWZ7 1642 aa29.38■■■□□ 2.29
ARMC6-220ENST00000546344 CCER1Q8TC90 406 aaPredicted RBP29.32■■■□□ 2.28
ARMC6-220ENST00000546344 TARBP1Q13395 1621 aaKnown RBP29.27■■■□□ 2.28
ARMC6-220ENST00000546344 GAPVD1Q14C86 1478 aa29.25■■■□□ 2.27
ARMC6-220ENST00000546344 TDRD9Q8NDG6 1382 aaKnown RBP29.25■■■□□ 2.27
ARMC6-220ENST00000546344 KANK4Q5T7N3 995 aaPredicted RBP29.24■■■□□ 2.27
ARMC6-220ENST00000546344 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
ARMC6-220ENST00000546344 MAP3K1Q13233 1512 aa29.2■■■□□ 2.26
ARMC6-220ENST00000546344 CTTNBP2Q8WZ74 1663 aa29.2■■■□□ 2.26
ARMC6-220ENST00000546344 EFCAB5A4FU69 1503 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms