RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 NISCHQ9Y2I1 1504 aa41.38■■■■■ 4.21
TRAPPC1-201ENST00000303731 CCDC180Q9P1Z9 1646 aa37.11■■■■□ 3.53
TRAPPC1-201ENST00000303731 ABCC9O60706 1549 aa36.69■■■■□ 3.46
TRAPPC1-201ENST00000303731 RB1CC1Q8TDY2 1594 aa35.17■■■■□ 3.22
TRAPPC1-201ENST00000303731 NACADO15069 1562 aa35.01■■■■□ 3.2
TRAPPC1-201ENST00000303731 DCAF8L2P0C7V8 631 aa34.7■■■■□ 3.15
TRAPPC1-201ENST00000303731 MYO15BQ96JP2 1530 aa34.66■■■■□ 3.14
TRAPPC1-201ENST00000303731 ZCCHC6Q5VYS8 1495 aaKnown RBP34.36■■■■□ 3.09
TRAPPC1-201ENST00000303731 UNC13AQ9UPW8 1703 aa34.32■■■■□ 3.08
TRAPPC1-201ENST00000303731 DCAF1Q9Y4B6 1507 aa34.29■■■■□ 3.08
TRAPPC1-201ENST00000303731 PABPN1Q86U42 306 aaKnown RBP eCLIP34.14■■■■□ 3.06
TRAPPC1-201ENST00000303731 DNAJC5BQ9UF47 199 aa34.09■■■■□ 3.05
TRAPPC1-201ENST00000303731 BICRAQ9NZM4 1560 aa34.05■■■■□ 3.04
TRAPPC1-201ENST00000303731 SHROOM4Q9ULL8 1493 aa33.81■■■■□ 3
TRAPPC1-201ENST00000303731 SCRIBQ14160 1630 aa33.7■■■□□ 2.99
TRAPPC1-201ENST00000303731 EIF4G1Q04637 1599 aaKnown RBP33.23■■■□□ 2.91
TRAPPC1-201ENST00000303731 CC2D2AQ9P2K1 1620 aa33.21■■■□□ 2.91
TRAPPC1-201ENST00000303731 CECR2Q9BXF3 1484 aa33.08■■■□□ 2.89
TRAPPC1-201ENST00000303731 NCAPD3P42695 1498 aa32.28■■■□□ 2.76
TRAPPC1-201ENST00000303731 SMARCA4P51532 1647 aa32.23■■■□□ 2.75
TRAPPC1-201ENST00000303731 ATAD2BQ9ULI0 1458 aa32.18■■■□□ 2.74
TRAPPC1-201ENST00000303731 SMARCA2P51531 1590 aa32.18■■■□□ 2.74
TRAPPC1-201ENST00000303731 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
TRAPPC1-201ENST00000303731 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
TRAPPC1-201ENST00000303731 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
TRAPPC1-201ENST00000303731 BAZ1BQ9UIG0 1483 aaKnown RBP31.91■■■□□ 2.7
TRAPPC1-201ENST00000303731 MROH2BQ7Z745 1585 aa31.83■■■□□ 2.69
TRAPPC1-201ENST00000303731 ERCC6Q03468 1493 aa31.74■■■□□ 2.67
TRAPPC1-201ENST00000303731 CUX2O14529 1486 aa31.65■■■□□ 2.66
TRAPPC1-201ENST00000303731 NESP48681 1621 aa31.57■■■□□ 2.64
TRAPPC1-201ENST00000303731 LAMC3Q9Y6N6 1575 aa31.55■■■□□ 2.64
TRAPPC1-201ENST00000303731 WIZO95785 1651 aa31.47■■■□□ 2.63
TRAPPC1-201ENST00000303731 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
TRAPPC1-201ENST00000303731 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
TRAPPC1-201ENST00000303731 CADPSQ9ULU8 1353 aa31.29■■■□□ 2.6
TRAPPC1-201ENST00000303731 RSF1Q96T23 1441 aaPredicted RBP31.28■■■□□ 2.6
TRAPPC1-201ENST00000303731 DNAJC5Q9H3Z4 198 aa31.25■■■□□ 2.59
TRAPPC1-201ENST00000303731 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
TRAPPC1-201ENST00000303731 TOP2AP11388 1531 aaKnown RBP31.16■■■□□ 2.58
TRAPPC1-201ENST00000303731 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
TRAPPC1-201ENST00000303731 CFTRP13569 1480 aa31■■■□□ 2.55
TRAPPC1-201ENST00000303731 CEP164Q9UPV0 1460 aa30.96■■■□□ 2.55
TRAPPC1-201ENST00000303731 WDR62O43379 1518 aa30.95■■■□□ 2.55
TRAPPC1-201ENST00000303731 FANCD2Q9BXW9 1451 aa30.92■■■□□ 2.54
TRAPPC1-201ENST00000303731 PRDM2Q13029 1718 aa30.78■■■□□ 2.52
TRAPPC1-201ENST00000303731 CCDC88BA6NC98 1476 aa30.74■■■□□ 2.51
TRAPPC1-201ENST00000303731 URB2Q14146 1524 aaKnown RBP30.62■■■□□ 2.49
TRAPPC1-201ENST00000303731 ABCC8Q09428 1581 aa30.42■■■□□ 2.46
TRAPPC1-201ENST00000303731 TOPBP1Q92547 1522 aa30.37■■■□□ 2.45
TRAPPC1-201ENST00000303731 IFT140Q96RY7 1462 aa30.34■■■□□ 2.45
TRAPPC1-201ENST00000303731 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.44
TRAPPC1-201ENST00000303731 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
TRAPPC1-201ENST00000303731 ZNF608Q9ULD9 1512 aaPredicted RBP30.17■■■□□ 2.42
TRAPPC1-201ENST00000303731 EIF4G3O43432 1585 aaKnown RBP30.09■■■□□ 2.41
TRAPPC1-201ENST00000303731 TARBP1Q13395 1621 aaKnown RBP30.08■■■□□ 2.41
TRAPPC1-201ENST00000303731 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
TRAPPC1-201ENST00000303731 SUPT5HO00267 1087 aaKnown RBP30.01■■■□□ 2.39
TRAPPC1-201ENST00000303731 AQRO60306 1485 aaKnown RBP eCLIP29.93■■■□□ 2.382e-6■■■□□ 15.2
TRAPPC1-201ENST00000303731 SOGA1O94964 1423 aa29.93■■■□□ 2.38
TRAPPC1-201ENST00000303731 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
TRAPPC1-201ENST00000303731 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
TRAPPC1-201ENST00000303731 FGD5Q6ZNL6 1462 aa29.91■■■□□ 2.38
TRAPPC1-201ENST00000303731 CUX1P39880 1505 aa29.91■■■□□ 2.38
TRAPPC1-201ENST00000303731 RAD54L2Q9Y4B4 1467 aa29.88■■■□□ 2.37
TRAPPC1-201ENST00000303731 CHD1O14646 1710 aa29.8■■■□□ 2.36
TRAPPC1-201ENST00000303731 TDRD9Q8NDG6 1382 aaKnown RBP29.78■■■□□ 2.36
TRAPPC1-201ENST00000303731 RIMBP3CA6NJZ7 1639 aa29.75■■■□□ 2.35
TRAPPC1-201ENST00000303731 RIMBP3BA6NNM3 1639 aa29.75■■■□□ 2.35
TRAPPC1-201ENST00000303731 RIMBP3Q9UFD9 1639 aa29.75■■■□□ 2.35
TRAPPC1-201ENST00000303731 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
TRAPPC1-201ENST00000303731 GRIN2BQ13224 1484 aa29.68■■■□□ 2.34
TRAPPC1-201ENST00000303731 MAGI1Q96QZ7 1491 aaPredicted RBP29.68■■■□□ 2.34
TRAPPC1-201ENST00000303731 FBLN2P98095 1184 aa29.68■■■□□ 2.34
TRAPPC1-201ENST00000303731 SNAPC4Q5SXM2 1469 aa29.68■■■□□ 2.34
TRAPPC1-201ENST00000303731 ABCA10Q8WWZ4 1543 aa29.62■■■□□ 2.33
TRAPPC1-201ENST00000303731 GAPVD1Q14C86 1478 aa29.59■■■□□ 2.33
TRAPPC1-201ENST00000303731 PBRM1Q86U86 1689 aa29.58■■■□□ 2.33
TRAPPC1-201ENST00000303731 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
TRAPPC1-201ENST00000303731 SYNJ2O15056 1496 aa29.56■■■□□ 2.32
TRAPPC1-201ENST00000303731 WRNQ14191 1432 aaPredicted RBP eCLIP29.56■■■□□ 2.32
TRAPPC1-201ENST00000303731 CHMP7Q8WUX9 453 aaPredicted RBP29.56■■■□□ 2.32
TRAPPC1-201ENST00000303731 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
TRAPPC1-201ENST00000303731 ABCA5Q8WWZ7 1642 aa29.55■■■□□ 2.32
TRAPPC1-201ENST00000303731 SYNJ1O43426 1573 aa29.54■■■□□ 2.32
TRAPPC1-201ENST00000303731 CLASP1Q7Z460 1538 aa29.48■■■□□ 2.31
TRAPPC1-201ENST00000303731 CYB5RLQ6IPT4 315 aa29.4■■■□□ 2.3
TRAPPC1-201ENST00000303731 ARAP1Q96P48 1450 aa29.39■■■□□ 2.3
TRAPPC1-201ENST00000303731 ADAMTS12P58397 1594 aa29.3■■■□□ 2.28
TRAPPC1-201ENST00000303731 ERICH3Q5RHP9 1530 aa29.3■■■□□ 2.28
TRAPPC1-201ENST00000303731 GRIN2AQ12879 1464 aa29.29■■■□□ 2.28
TRAPPC1-201ENST00000303731 FHAD1B1AJZ9 1412 aa29.25■■■□□ 2.27
TRAPPC1-201ENST00000303731 NUP160Q12769 1436 aa29.18■■■□□ 2.26
TRAPPC1-201ENST00000303731 CEP170Q5SW79 1584 aa29.13■■■□□ 2.25
TRAPPC1-201ENST00000303731 SHROOM2Q13796 1616 aa29.04■■■□□ 2.24
TRAPPC1-201ENST00000303731 TRHP20396 242 aaPredicted RBP29■■■□□ 2.23
TRAPPC1-201ENST00000303731 KIF27Q86VH2 1401 aa28.99■■■□□ 2.23
TRAPPC1-201ENST00000303731 ERCC6L2Q5T890 1561 aa28.94■■■□□ 2.22
TRAPPC1-201ENST00000303731 CUL7Q14999 1698 aa28.93■■■□□ 2.22
TRAPPC1-201ENST00000303731 RUSC2Q8N2Y8 1516 aa28.89■■■□□ 2.22
TRAPPC1-201ENST00000303731 IGF1RP08069 1367 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms