RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 NISCHQ9Y2I1 1504 aa41.94■■■■■ 4.3
SCUBE1-201ENST00000290460 CCDC180Q9P1Z9 1646 aa35.76■■■■□ 3.32
SCUBE1-201ENST00000290460 SHROOM4Q9ULL8 1493 aa35.67■■■■□ 3.3
SCUBE1-201ENST00000290460 ZCCHC6Q5VYS8 1495 aaKnown RBP35.45■■■■□ 3.27
SCUBE1-201ENST00000290460 SUPT5HO00267 1087 aaKnown RBP34.88■■■■□ 3.17
SCUBE1-201ENST00000290460 DCAF8L2P0C7V8 631 aa34.81■■■■□ 3.16
SCUBE1-201ENST00000290460 DCAF1Q9Y4B6 1507 aa34.38■■■■□ 3.09
SCUBE1-201ENST00000290460 CHIC1Q5VXU3 224 aa33.82■■■■□ 3
SCUBE1-201ENST00000290460 MYO15BQ96JP2 1530 aa33.72■■■□□ 2.99
SCUBE1-201ENST00000290460 SCRIBQ14160 1630 aa33.52■■■□□ 2.96
SCUBE1-201ENST00000290460 ABCC9O60706 1549 aa33.45■■■□□ 2.95
SCUBE1-201ENST00000290460 RSF1Q96T23 1441 aaPredicted RBP33.13■■■□□ 2.89
SCUBE1-201ENST00000290460 NACADO15069 1562 aa33.06■■■□□ 2.88
SCUBE1-201ENST00000290460 LOC105371045A0A1W2PR82 267 aa32.84■■■□□ 2.85
SCUBE1-201ENST00000290460 RB1CC1Q8TDY2 1594 aa32.82■■■□□ 2.84
SCUBE1-201ENST00000290460 CECR2Q9BXF3 1484 aa32.75■■■□□ 2.83
SCUBE1-201ENST00000290460 MROH2BQ7Z745 1585 aa32.62■■■□□ 2.81
SCUBE1-201ENST00000290460 PCGF6Q9BYE7 350 aa32.62■■■□□ 2.81
SCUBE1-201ENST00000290460 HRCP23327 699 aa32.48■■■□□ 2.79
SCUBE1-201ENST00000290460 WIZO95785 1651 aa32.48■■■□□ 2.79
SCUBE1-201ENST00000290460 TRIM41Q8WV44 630 aa32.47■■■□□ 2.79
SCUBE1-201ENST00000290460 FAM9AQ8IZU1 332 aaPredicted RBP32.24■■■□□ 2.75
SCUBE1-201ENST00000290460 BAZ1AQ9NRL2 1556 aaPredicted RBP32.23■■■□□ 2.75
SCUBE1-201ENST00000290460 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
SCUBE1-201ENST00000290460 SMARCA4P51532 1647 aa32.01■■■□□ 2.71
SCUBE1-201ENST00000290460 TRIM26Q12899 539 aaPredicted RBP32■■■□□ 2.71
SCUBE1-201ENST00000290460 EHMT2Q96KQ7 1210 aa32■■■□□ 2.71
SCUBE1-201ENST00000290460 EIF4G1Q04637 1599 aaKnown RBP31.96■■■□□ 2.71
SCUBE1-201ENST00000290460 TOP2AP11388 1531 aaKnown RBP31.91■■■□□ 2.7
SCUBE1-201ENST00000290460 PPARGC1BQ86YN6 1023 aaKnown RBP31.89■■■□□ 2.7
SCUBE1-201ENST00000290460 CCDC88BA6NC98 1476 aa31.77■■■□□ 2.68
SCUBE1-201ENST00000290460 PABPN1Q86U42 306 aaKnown RBP eCLIP31.76■■■□□ 2.67
SCUBE1-201ENST00000290460 SMARCA2P51531 1590 aa31.76■■■□□ 2.67
SCUBE1-201ENST00000290460 BICRAQ9NZM4 1560 aa31.73■■■□□ 2.67
SCUBE1-201ENST00000290460 ABCC8Q09428 1581 aa31.69■■■□□ 2.66
SCUBE1-201ENST00000290460 PEG3Q9GZU2 1588 aa31.37■■■□□ 2.61
SCUBE1-201ENST00000290460 SOGA1O94964 1423 aa31.33■■■□□ 2.61
SCUBE1-201ENST00000290460 RUSC2Q8N2Y8 1516 aa31.2■■■□□ 2.58
SCUBE1-201ENST00000290460 ATAD2BQ9ULI0 1458 aa31.19■■■□□ 2.58
SCUBE1-201ENST00000290460 ZEB1P37275 1124 aaPredicted RBP31.17■■■□□ 2.58
SCUBE1-201ENST00000290460 WRNQ14191 1432 aaPredicted RBP eCLIP31.12■■■□□ 2.57
SCUBE1-201ENST00000290460 BAZ1BQ9UIG0 1483 aaKnown RBP31.11■■■□□ 2.57
SCUBE1-201ENST00000290460 CEP162Q5TB80 1403 aa31.09■■■□□ 2.57
SCUBE1-201ENST00000290460 CSRNP3Q8WYN3 585 aa31.08■■■□□ 2.57
SCUBE1-201ENST00000290460 EEA1Q15075 1411 aa31.07■■■□□ 2.56
SCUBE1-201ENST00000290460 SYNJ1O43426 1573 aa31.03■■■□□ 2.56
SCUBE1-201ENST00000290460 TNIKQ9UKE5 1360 aa31.02■■■□□ 2.56
SCUBE1-201ENST00000290460 UBTFP17480 764 aaKnown RBP30.96■■■□□ 2.55
SCUBE1-201ENST00000290460 TTBK1Q5TCY1 1321 aaPredicted RBP30.93■■■□□ 2.54
SCUBE1-201ENST00000290460 GOLGA3Q08378 1498 aa30.89■■■□□ 2.54
SCUBE1-201ENST00000290460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.81■■■□□ 2.52
SCUBE1-201ENST00000290460 CEP164Q9UPV0 1460 aa30.73■■■□□ 2.51
SCUBE1-201ENST00000290460 KIF21BO75037 1637 aa30.72■■■□□ 2.51
SCUBE1-201ENST00000290460 CCER1Q8TC90 406 aaPredicted RBP30.68■■■□□ 2.5
SCUBE1-201ENST00000290460 TOP2BQ02880 1626 aa30.64■■■□□ 2.49
SCUBE1-201ENST00000290460 HMGXB3Q12766 1538 aa30.59■■■□□ 2.49
SCUBE1-201ENST00000290460 NCAPD3P42695 1498 aa30.58■■■□□ 2.49
SCUBE1-201ENST00000290460 RAPGEF2Q9Y4G8 1499 aa30.57■■■□□ 2.48
SCUBE1-201ENST00000290460 CLIP1P30622 1438 aa30.54■■■□□ 2.48
SCUBE1-201ENST00000290460 BIVM-ERCC5R4GMW8 1640 aa30.54■■■□□ 2.48
SCUBE1-201ENST00000290460 RANGAP1P46060 587 aaPredicted RBP30.44■■■□□ 2.46
SCUBE1-201ENST00000290460 VPS8Q8N3P4 1428 aa30.38■■■□□ 2.45
SCUBE1-201ENST00000290460 CUX1P39880 1505 aa30.38■■■□□ 2.45
SCUBE1-201ENST00000290460 CFTRP13569 1480 aa30.32■■■□□ 2.44
SCUBE1-201ENST00000290460 PRXQ9BXM0 1461 aa30.26■■■□□ 2.44
SCUBE1-201ENST00000290460 ERICH3Q5RHP9 1530 aa30.25■■■□□ 2.43
SCUBE1-201ENST00000290460 APLP2Q06481 763 aa30.2■■■□□ 2.43
SCUBE1-201ENST00000290460 HNRNPUL2Q1KMD3 747 aaKnown RBP30.2■■■□□ 2.42
SCUBE1-201ENST00000290460 PRDM2Q13029 1718 aa30.16■■■□□ 2.42
SCUBE1-201ENST00000290460 KIF27Q86VH2 1401 aa30.15■■■□□ 2.42
SCUBE1-201ENST00000290460 ARAP1Q96P48 1450 aa30.09■■■□□ 2.41
SCUBE1-201ENST00000290460 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
SCUBE1-201ENST00000290460 DIEXFQ68CQ4 756 aaKnown RBP29.98■■■□□ 2.39
SCUBE1-201ENST00000290460 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
SCUBE1-201ENST00000290460 CUX2O14529 1486 aa29.93■■■□□ 2.38
SCUBE1-201ENST00000290460 KANK4Q5T7N3 995 aaPredicted RBP29.91■■■□□ 2.38
SCUBE1-201ENST00000290460 FGD5Q6ZNL6 1462 aa29.86■■■□□ 2.37
SCUBE1-201ENST00000290460 ARHGAP35Q9NRY4 1499 aa29.86■■■□□ 2.37
SCUBE1-201ENST00000290460 IGF1RP08069 1367 aa29.85■■■□□ 2.37
SCUBE1-201ENST00000290460 SCAF1Q9H7N4 1312 aaKnown RBP29.84■■■□□ 2.37
SCUBE1-201ENST00000290460 ZNF316A6NFI3 1004 aaPredicted RBP29.79■■■□□ 2.36
SCUBE1-201ENST00000290460 FANCD2Q9BXW9 1451 aa29.73■■■□□ 2.35
SCUBE1-201ENST00000290460 CARMIL1Q5VZK9 1371 aa29.72■■■□□ 2.35
SCUBE1-201ENST00000290460 RRBP1Q9P2E9 1410 aaKnown RBP29.65■■■□□ 2.34
SCUBE1-201ENST00000290460 NESP48681 1621 aa29.62■■■□□ 2.33
SCUBE1-201ENST00000290460 NEUROD1Q13562 356 aa29.61■■■□□ 2.33
SCUBE1-201ENST00000290460 ACIN1Q9UKV3 1341 aaKnown RBP29.6■■■□□ 2.33
SCUBE1-201ENST00000290460 RAD54L2Q9Y4B4 1467 aa29.59■■■□□ 2.33
SCUBE1-201ENST00000290460 DHX57Q6P158 1386 aaKnown RBP29.58■■■□□ 2.33
SCUBE1-201ENST00000290460 DNMBPQ6XZF7 1577 aa29.58■■■□□ 2.33
SCUBE1-201ENST00000290460 CCNB3Q8WWL7 1395 aa29.54■■■□□ 2.32
SCUBE1-201ENST00000290460 TOPBP1Q92547 1522 aa29.53■■■□□ 2.32
SCUBE1-201ENST00000290460 POLA1P09884 1462 aaPredicted RBP29.52■■■□□ 2.32
SCUBE1-201ENST00000290460 TIAM1Q13009 1591 aa29.52■■■□□ 2.32
SCUBE1-201ENST00000290460 ITGAEP38570 1179 aa29.48■■■□□ 2.31
SCUBE1-201ENST00000290460 ABCA10Q8WWZ4 1543 aa29.48■■■□□ 2.31
SCUBE1-201ENST00000290460 P3H3Q8IVL6 736 aa29.45■■■□□ 2.31
SCUBE1-201ENST00000290460 CLSPNQ9HAW4 1339 aa29.45■■■□□ 2.31
SCUBE1-201ENST00000290460 CENPBP07199 599 aaPredicted RBP29.43■■■□□ 2.3
SCUBE1-201ENST00000290460 MAP3K1Q13233 1512 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms