RNA–Protein interactions for RNA: ENST00000348035.8

RAC1-201, Transcript of Rac family small GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAC1, Length 2,323 nt, Biotype protein coding, Subcellular localisation Cytosol, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAC1-201ENST00000348035 NISCHQ9Y2I1 1504 aa41.69■■■■■ 4.26
RAC1-201ENST00000348035 CCDC180Q9P1Z9 1646 aa35.54■■■■□ 3.28
RAC1-201ENST00000348035 SHROOM4Q9ULL8 1493 aa35.34■■■■□ 3.25
RAC1-201ENST00000348035 ZCCHC6Q5VYS8 1495 aaKnown RBP35.2■■■■□ 3.22
RAC1-201ENST00000348035 DCAF8L2P0C7V8 631 aa34.7■■■■□ 3.15
RAC1-201ENST00000348035 SUPT5HO00267 1087 aaKnown RBP34.56■■■■□ 3.12
RAC1-201ENST00000348035 DCAF1Q9Y4B6 1507 aa34.22■■■■□ 3.07
RAC1-201ENST00000348035 CHIC1Q5VXU3 224 aa33.47■■■□□ 2.95
RAC1-201ENST00000348035 MYO15BQ96JP2 1530 aa33.35■■■□□ 2.93
RAC1-201ENST00000348035 SCRIBQ14160 1630 aa33.26■■■□□ 2.92
RAC1-201ENST00000348035 ABCC9O60706 1549 aa33.18■■■□□ 2.9
RAC1-201ENST00000348035 NACADO15069 1562 aa32.97■■■□□ 2.87
RAC1-201ENST00000348035 RSF1Q96T23 1441 aaPredicted RBP32.9■■■□□ 2.86
RAC1-201ENST00000348035 CECR2Q9BXF3 1484 aa32.52■■■□□ 2.8
RAC1-201ENST00000348035 RB1CC1Q8TDY2 1594 aa32.47■■■□□ 2.79
RAC1-201ENST00000348035 LOC105371045A0A1W2PR82 267 aa32.46■■■□□ 2.79
RAC1-201ENST00000348035 MROH2BQ7Z745 1585 aa32.38■■■□□ 2.77
RAC1-201ENST00000348035 TRIM41Q8WV44 630 aa32.25■■■□□ 2.75
RAC1-201ENST00000348035 WIZO95785 1651 aa32.16■■■□□ 2.74
RAC1-201ENST00000348035 PCGF6Q9BYE7 350 aa32.16■■■□□ 2.74
RAC1-201ENST00000348035 BAZ1AQ9NRL2 1556 aaPredicted RBP32.04■■■□□ 2.72
RAC1-201ENST00000348035 HRCP23327 699 aa31.97■■■□□ 2.71
RAC1-201ENST00000348035 FAM9AQ8IZU1 332 aaPredicted RBP31.94■■■□□ 2.7
RAC1-201ENST00000348035 UNC13AQ9UPW8 1703 aa31.87■■■□□ 2.69
RAC1-201ENST00000348035 SMARCA4P51532 1647 aa31.78■■■□□ 2.68
RAC1-201ENST00000348035 PABPN1Q86U42 306 aaKnown RBP eCLIP31.71■■■□□ 2.67
RAC1-201ENST00000348035 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.67
RAC1-201ENST00000348035 EHMT2Q96KQ7 1210 aa31.66■■■□□ 2.66
RAC1-201ENST00000348035 TRIM26Q12899 539 aaPredicted RBP31.65■■■□□ 2.66
RAC1-201ENST00000348035 EIF4G1Q04637 1599 aaKnown RBP31.59■■■□□ 2.65
RAC1-201ENST00000348035 CCDC88BA6NC98 1476 aa31.58■■■□□ 2.65
RAC1-201ENST00000348035 BICRAQ9NZM4 1560 aa31.56■■■□□ 2.64
RAC1-201ENST00000348035 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
RAC1-201ENST00000348035 ABCC8Q09428 1581 aa31.35■■■□□ 2.61
RAC1-201ENST00000348035 PPARGC1BQ86YN6 1023 aaKnown RBP31.31■■■□□ 2.6
RAC1-201ENST00000348035 PEG3Q9GZU2 1588 aa31.19■■■□□ 2.58
RAC1-201ENST00000348035 ATAD2BQ9ULI0 1458 aa31.07■■■□□ 2.56
RAC1-201ENST00000348035 SOGA1O94964 1423 aa31.05■■■□□ 2.56
RAC1-201ENST00000348035 BAZ1BQ9UIG0 1483 aaKnown RBP30.97■■■□□ 2.55
RAC1-201ENST00000348035 WRNQ14191 1432 aaPredicted RBP eCLIP30.92■■■□□ 2.54
RAC1-201ENST00000348035 CSRNP3Q8WYN3 585 aa30.91■■■□□ 2.54
RAC1-201ENST00000348035 EEA1Q15075 1411 aa30.89■■■□□ 2.54
RAC1-201ENST00000348035 RUSC2Q8N2Y8 1516 aa30.89■■■□□ 2.54
RAC1-201ENST00000348035 ZEB1P37275 1124 aaPredicted RBP30.85■■■□□ 2.53
RAC1-201ENST00000348035 CEP162Q5TB80 1403 aa30.79■■■□□ 2.52
RAC1-201ENST00000348035 TNIKQ9UKE5 1360 aa30.78■■■□□ 2.52
RAC1-201ENST00000348035 UBTFP17480 764 aaKnown RBP30.77■■■□□ 2.52
RAC1-201ENST00000348035 SYNJ1O43426 1573 aa30.72■■■□□ 2.51
RAC1-201ENST00000348035 GOLGA3Q08378 1498 aa30.65■■■□□ 2.5
RAC1-201ENST00000348035 TTBK1Q5TCY1 1321 aaPredicted RBP30.56■■■□□ 2.48
RAC1-201ENST00000348035 NCAPD3P42695 1498 aa30.53■■■□□ 2.48
RAC1-201ENST00000348035 CEP164Q9UPV0 1460 aa30.5■■■□□ 2.47
RAC1-201ENST00000348035 HMGXB3Q12766 1538 aa30.47■■■□□ 2.47
RAC1-201ENST00000348035 KIF21BO75037 1637 aa30.42■■■□□ 2.46
RAC1-201ENST00000348035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.41■■■□□ 2.46
RAC1-201ENST00000348035 TOP2BQ02880 1626 aa30.39■■■□□ 2.45
RAC1-201ENST00000348035 CCER1Q8TC90 406 aaPredicted RBP30.35■■■□□ 2.45
RAC1-201ENST00000348035 RAPGEF2Q9Y4G8 1499 aa30.3■■■□□ 2.44
RAC1-201ENST00000348035 CLIP1P30622 1438 aa30.29■■■□□ 2.44
RAC1-201ENST00000348035 BIVM-ERCC5R4GMW8 1640 aa30.26■■■□□ 2.43
RAC1-201ENST00000348035 RANGAP1P46060 587 aaPredicted RBP30.2■■■□□ 2.43
RAC1-201ENST00000348035 CFTRP13569 1480 aa30.2■■■□□ 2.42
RAC1-201ENST00000348035 CUX1P39880 1505 aa30.16■■■□□ 2.42
RAC1-201ENST00000348035 VPS8Q8N3P4 1428 aa30.11■■■□□ 2.41
RAC1-201ENST00000348035 APLP2Q06481 763 aa30.05■■■□□ 2.4
RAC1-201ENST00000348035 PRXQ9BXM0 1461 aa30.05■■■□□ 2.4
RAC1-201ENST00000348035 KIF27Q86VH2 1401 aa30.02■■■□□ 2.4
RAC1-201ENST00000348035 ERICH3Q5RHP9 1530 aa30■■■□□ 2.39
RAC1-201ENST00000348035 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
RAC1-201ENST00000348035 HNRNPUL2Q1KMD3 747 aaKnown RBP29.9■■■□□ 2.38
RAC1-201ENST00000348035 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
RAC1-201ENST00000348035 PRDM2Q13029 1718 aa29.82■■■□□ 2.36
RAC1-201ENST00000348035 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
RAC1-201ENST00000348035 CUX2O14529 1486 aa29.76■■■□□ 2.36
RAC1-201ENST00000348035 IGF1RP08069 1367 aa29.71■■■□□ 2.35
RAC1-201ENST00000348035 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
RAC1-201ENST00000348035 KANK4Q5T7N3 995 aaPredicted RBP29.64■■■□□ 2.34
RAC1-201ENST00000348035 FANCD2Q9BXW9 1451 aa29.63■■■□□ 2.33
RAC1-201ENST00000348035 ARHGAP35Q9NRY4 1499 aa29.6■■■□□ 2.33
RAC1-201ENST00000348035 CARMIL1Q5VZK9 1371 aa29.59■■■□□ 2.33
RAC1-201ENST00000348035 DIEXFQ68CQ4 756 aaKnown RBP29.57■■■□□ 2.32
RAC1-201ENST00000348035 NESP48681 1621 aa29.47■■■□□ 2.31
RAC1-201ENST00000348035 ZNF316A6NFI3 1004 aaPredicted RBP29.45■■■□□ 2.3
RAC1-201ENST00000348035 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
RAC1-201ENST00000348035 DNMBPQ6XZF7 1577 aa29.42■■■□□ 2.3
RAC1-201ENST00000348035 TOPBP1Q92547 1522 aa29.39■■■□□ 2.3
RAC1-201ENST00000348035 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
RAC1-201ENST00000348035 RRBP1Q9P2E9 1410 aaKnown RBP29.36■■■□□ 2.29
RAC1-201ENST00000348035 ABCA10Q8WWZ4 1543 aa29.33■■■□□ 2.29
RAC1-201ENST00000348035 CCNB3Q8WWL7 1395 aa29.29■■■□□ 2.28
RAC1-201ENST00000348035 P3H3Q8IVL6 736 aa29.28■■■□□ 2.28
RAC1-201ENST00000348035 DHX57Q6P158 1386 aaKnown RBP29.24■■■□□ 2.27
RAC1-201ENST00000348035 SCAF1Q9H7N4 1312 aaKnown RBP29.23■■■□□ 2.27
RAC1-201ENST00000348035 LAMC3Q9Y6N6 1575 aa29.23■■■□□ 2.27
RAC1-201ENST00000348035 ITGAEP38570 1179 aa29.22■■■□□ 2.27
RAC1-201ENST00000348035 TIAM1Q13009 1591 aa29.21■■■□□ 2.27
RAC1-201ENST00000348035 CLSPNQ9HAW4 1339 aa29.2■■■□□ 2.27
RAC1-201ENST00000348035 MAP3K1Q13233 1512 aa29.2■■■□□ 2.27
RAC1-201ENST00000348035 URB2Q14146 1524 aaKnown RBP29.19■■■□□ 2.26
RAC1-201ENST00000348035 DNAJC5BQ9UF47 199 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms