Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 CHCHD2P8-201ENST00000429873 447 ntBASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 AC004263.2-201ENST00000617183 678 ntBASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RFWD3Q6PCD5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 MIR3180-1-201ENST00000580374 94 ntBASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 MIR3180-3-201ENST00000584616 94 ntBASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 AP002414.4-201ENST00000589764 1148 ntBASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 KRT89P-201ENST00000620027 1478 ntBASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 AL353692.3-201ENST00000407031 1396 ntBASIC18.81■□□□□ 0.6
RFWD3Q6PCD5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 KRT18P1-202ENST00000452408 1331 ntBASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFWD3Q6PCD5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD3Q6PCD5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms