RNA–Protein interactions for RNA: ENST00000344079.9

LRRC27-201, Transcript of leucine rich repeat containing 27, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRRC27, Length 1,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC27-201ENST00000344079 NISCHQ9Y2I1 1504 aa41.65■■■■■ 4.26
LRRC27-201ENST00000344079 CCDC180Q9P1Z9 1646 aa36.3■■■■□ 3.4
LRRC27-201ENST00000344079 ZCCHC6Q5VYS8 1495 aaKnown RBP35■■■■□ 3.19
LRRC27-201ENST00000344079 ABCC9O60706 1549 aa34.85■■■■□ 3.17
LRRC27-201ENST00000344079 DCAF1Q9Y4B6 1507 aa34.43■■■■□ 3.1
LRRC27-201ENST00000344079 DCAF8L2P0C7V8 631 aa34.39■■■■□ 3.1
LRRC27-201ENST00000344079 MYO15BQ96JP2 1530 aa34.02■■■■□ 3.04
LRRC27-201ENST00000344079 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.03
LRRC27-201ENST00000344079 NACADO15069 1562 aa33.83■■■■□ 3.01
LRRC27-201ENST00000344079 RB1CC1Q8TDY2 1594 aa33.75■■■□□ 2.99
LRRC27-201ENST00000344079 SCRIBQ14160 1630 aa33.4■■■□□ 2.94
LRRC27-201ENST00000344079 UNC13AQ9UPW8 1703 aa33.06■■■□□ 2.88
LRRC27-201ENST00000344079 SUPT5HO00267 1087 aaKnown RBP32.73■■■□□ 2.83
LRRC27-201ENST00000344079 BICRAQ9NZM4 1560 aa32.69■■■□□ 2.82
LRRC27-201ENST00000344079 PABPN1Q86U42 306 aaKnown RBP eCLIP32.65■■■□□ 2.82
LRRC27-201ENST00000344079 CECR2Q9BXF3 1484 aa32.36■■■□□ 2.77
LRRC27-201ENST00000344079 RSF1Q96T23 1441 aaPredicted RBP32.33■■■□□ 2.77
LRRC27-201ENST00000344079 MROH2BQ7Z745 1585 aa32.19■■■□□ 2.74
LRRC27-201ENST00000344079 BAZ1AQ9NRL2 1556 aaPredicted RBP32.16■■■□□ 2.74
LRRC27-201ENST00000344079 SMARCA4P51532 1647 aa32.01■■■□□ 2.72
LRRC27-201ENST00000344079 WIZO95785 1651 aa31.92■■■□□ 2.7
LRRC27-201ENST00000344079 EIF4G1Q04637 1599 aaKnown RBP31.8■■■□□ 2.68
LRRC27-201ENST00000344079 PEG3Q9GZU2 1588 aa31.62■■■□□ 2.65
LRRC27-201ENST00000344079 TOP2AP11388 1531 aaKnown RBP31.6■■■□□ 2.65
LRRC27-201ENST00000344079 CC2D2AQ9P2K1 1620 aa31.52■■■□□ 2.64
LRRC27-201ENST00000344079 ATAD2BQ9ULI0 1458 aa31.48■■■□□ 2.63
LRRC27-201ENST00000344079 SMARCA2P51531 1590 aa31.46■■■□□ 2.63
LRRC27-201ENST00000344079 CHIC1Q5VXU3 224 aa31.35■■■□□ 2.61
LRRC27-201ENST00000344079 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
LRRC27-201ENST00000344079 DNAJC5BQ9UF47 199 aa31.28■■■□□ 2.6
LRRC27-201ENST00000344079 CCDC88BA6NC98 1476 aa31.27■■■□□ 2.6
LRRC27-201ENST00000344079 NCAPD3P42695 1498 aa31.2■■■□□ 2.58
LRRC27-201ENST00000344079 HMGXB3Q12766 1538 aa31.17■■■□□ 2.58
LRRC27-201ENST00000344079 TRIM41Q8WV44 630 aa30.77■■■□□ 2.52
LRRC27-201ENST00000344079 ABCC8Q09428 1581 aa30.63■■■□□ 2.49
LRRC27-201ENST00000344079 CFTRP13569 1480 aa30.52■■■□□ 2.48
LRRC27-201ENST00000344079 WRNQ14191 1432 aaPredicted RBP eCLIP30.43■■■□□ 2.46
LRRC27-201ENST00000344079 CADPSQ9ULU8 1353 aa30.4■■■□□ 2.46
LRRC27-201ENST00000344079 PRDM2Q13029 1718 aa30.35■■■□□ 2.45
LRRC27-201ENST00000344079 NESP48681 1621 aa30.34■■■□□ 2.45
LRRC27-201ENST00000344079 LAMC3Q9Y6N6 1575 aa30.31■■■□□ 2.44
LRRC27-201ENST00000344079 SYNJ1O43426 1573 aa30.3■■■□□ 2.44
LRRC27-201ENST00000344079 FAM9AQ8IZU1 332 aaPredicted RBP30.21■■■□□ 2.43
LRRC27-201ENST00000344079 TOP2BQ02880 1626 aa30.18■■■□□ 2.42
LRRC27-201ENST00000344079 LOC105371045A0A1W2PR82 267 aa30.15■■■□□ 2.42
LRRC27-201ENST00000344079 BIVM-ERCC5R4GMW8 1640 aa30.14■■■□□ 2.42
LRRC27-201ENST00000344079 CUX1P39880 1505 aa30.09■■■□□ 2.41
LRRC27-201ENST00000344079 FANCD2Q9BXW9 1451 aa30.07■■■□□ 2.4
LRRC27-201ENST00000344079 SOGA1O94964 1423 aa30.07■■■□□ 2.4
LRRC27-201ENST00000344079 PDS5BQ9NTI5 1447 aa30.06■■■□□ 2.4
LRRC27-201ENST00000344079 KIF21AQ7Z4S6 1674 aa30.04■■■□□ 2.4
LRRC27-201ENST00000344079 EEA1Q15075 1411 aa30.01■■■□□ 2.39
LRRC27-201ENST00000344079 ERCC6Q03468 1493 aa30■■■□□ 2.39
LRRC27-201ENST00000344079 CEP164Q9UPV0 1460 aa29.95■■■□□ 2.39
LRRC27-201ENST00000344079 RUSC2Q8N2Y8 1516 aa29.94■■■□□ 2.38
LRRC27-201ENST00000344079 CSRNP3Q8WYN3 585 aa29.83■■■□□ 2.37
LRRC27-201ENST00000344079 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
LRRC27-201ENST00000344079 EHMT2Q96KQ7 1210 aa29.79■■■□□ 2.36
LRRC27-201ENST00000344079 FGD5Q6ZNL6 1462 aa29.76■■■□□ 2.35
LRRC27-201ENST00000344079 MRC2Q9UBG0 1479 aa29.75■■■□□ 2.35
LRRC27-201ENST00000344079 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
LRRC27-201ENST00000344079 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
LRRC27-201ENST00000344079 URB2Q14146 1524 aaKnown RBP29.7■■■□□ 2.35
LRRC27-201ENST00000344079 KIF27Q86VH2 1401 aa29.66■■■□□ 2.34
LRRC27-201ENST00000344079 KIF21BO75037 1637 aa29.62■■■□□ 2.33
LRRC27-201ENST00000344079 WDR62O43379 1518 aa29.62■■■□□ 2.33
LRRC27-201ENST00000344079 POLA1P09884 1462 aaPredicted RBP29.62■■■□□ 2.33
LRRC27-201ENST00000344079 GOLGA3Q08378 1498 aa29.6■■■□□ 2.33
LRRC27-201ENST00000344079 CUX2O14529 1486 aa29.57■■■□□ 2.32
LRRC27-201ENST00000344079 RAD54L2Q9Y4B4 1467 aa29.51■■■□□ 2.32
LRRC27-201ENST00000344079 TNIKQ9UKE5 1360 aa29.51■■■□□ 2.31
LRRC27-201ENST00000344079 ABCA10Q8WWZ4 1543 aa29.5■■■□□ 2.31
LRRC27-201ENST00000344079 PRXQ9BXM0 1461 aa29.46■■■□□ 2.31
LRRC27-201ENST00000344079 UBTFP17480 764 aaKnown RBP29.46■■■□□ 2.31
LRRC27-201ENST00000344079 RAPGEF2Q9Y4G8 1499 aa29.45■■■□□ 2.31
LRRC27-201ENST00000344079 ERICH3Q5RHP9 1530 aa29.42■■■□□ 2.3
LRRC27-201ENST00000344079 WDR97A6NE52 1622 aa29.39■■■□□ 2.3
LRRC27-201ENST00000344079 IGF1RP08069 1367 aa29.39■■■□□ 2.29
LRRC27-201ENST00000344079 CEP162Q5TB80 1403 aa29.36■■■□□ 2.29
LRRC27-201ENST00000344079 TARBP1Q13395 1621 aaKnown RBP29.3■■■□□ 2.28
LRRC27-201ENST00000344079 ABCA5Q8WWZ7 1642 aa29.26■■■□□ 2.27
LRRC27-201ENST00000344079 IFT140Q96RY7 1462 aa29.25■■■□□ 2.27
LRRC27-201ENST00000344079 CARMIL1Q5VZK9 1371 aa29.24■■■□□ 2.27
LRRC27-201ENST00000344079 TDRD9Q8NDG6 1382 aaKnown RBP29.22■■■□□ 2.27
LRRC27-201ENST00000344079 GAPVD1Q14C86 1478 aa29.19■■■□□ 2.26
LRRC27-201ENST00000344079 CUL7Q14999 1698 aa29.16■■■□□ 2.26
LRRC27-201ENST00000344079 CLIP1P30622 1438 aa29.14■■■□□ 2.25
LRRC27-201ENST00000344079 ZNF608Q9ULD9 1512 aaPredicted RBP29.11■■■□□ 2.25
LRRC27-201ENST00000344079 EIF4G3O43432 1585 aaKnown RBP29.06■■■□□ 2.24
LRRC27-201ENST00000344079 AQRO60306 1485 aaKnown RBP eCLIP29.04■■■□□ 2.24
LRRC27-201ENST00000344079 PBRM1Q86U86 1689 aa29.02■■■□□ 2.24
LRRC27-201ENST00000344079 RANGAP1P46060 587 aaPredicted RBP28.98■■■□□ 2.23
LRRC27-201ENST00000344079 GRIN2BQ13224 1484 aa28.96■■■□□ 2.23
LRRC27-201ENST00000344079 FHAD1B1AJZ9 1412 aa28.88■■■□□ 2.21
LRRC27-201ENST00000344079 VPS8Q8N3P4 1428 aa28.88■■■□□ 2.21
LRRC27-201ENST00000344079 ADAMTS12P58397 1594 aa28.87■■■□□ 2.21
LRRC27-201ENST00000344079 ARAP1Q96P48 1450 aa28.84■■■□□ 2.21
LRRC27-201ENST00000344079 CTTNBP2Q8WZ74 1663 aa28.83■■■□□ 2.21
LRRC27-201ENST00000344079 ARHGAP35Q9NRY4 1499 aa28.83■■■□□ 2.21
LRRC27-201ENST00000344079 SNAPC4Q5SXM2 1469 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms