RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 NISCHQ9Y2I1 1504 aa45.16■■■■■ 4.82
VPS72-207ENST00000640458 ABCC9O60706 1549 aa41.56■■■■■ 4.24
VPS72-207ENST00000640458 CCDC180Q9P1Z9 1646 aa40.75■■■■■ 4.11
VPS72-207ENST00000640458 DNAJC5BQ9UF47 199 aa39.61■■■■□ 3.93
VPS72-207ENST00000640458 RB1CC1Q8TDY2 1594 aa39.18■■■■□ 3.86
VPS72-207ENST00000640458 NACADO15069 1562 aa38.73■■■■□ 3.79
VPS72-207ENST00000640458 PABPN1Q86U42 306 aaKnown RBP eCLIP38.65■■■■□ 3.78
VPS72-207ENST00000640458 DCAF8L2P0C7V8 631 aa38.62■■■■□ 3.77
VPS72-207ENST00000640458 UNC13AQ9UPW8 1703 aa38.25■■■■□ 3.71
VPS72-207ENST00000640458 BICRAQ9NZM4 1560 aa38.06■■■■□ 3.68
VPS72-207ENST00000640458 MYO15BQ96JP2 1530 aa37.92■■■■□ 3.66
VPS72-207ENST00000640458 CECR2Q9BXF3 1484 aa37.48■■■■□ 3.59
VPS72-207ENST00000640458 CC2D2AQ9P2K1 1620 aa37.45■■■■□ 3.59
VPS72-207ENST00000640458 SHROOM4Q9ULL8 1493 aa37.4■■■■□ 3.58
VPS72-207ENST00000640458 ZCCHC6Q5VYS8 1495 aaKnown RBP37.26■■■■□ 3.56
VPS72-207ENST00000640458 DCAF1Q9Y4B6 1507 aa37.2■■■■□ 3.55
VPS72-207ENST00000640458 SCRIBQ14160 1630 aa37.19■■■■□ 3.54
VPS72-207ENST00000640458 EIF4G1Q04637 1599 aaKnown RBP37.18■■■■□ 3.54
VPS72-207ENST00000640458 DNAJC5Q9H3Z4 198 aa36.85■■■■□ 3.49
VPS72-207ENST00000640458 CUX2O14529 1486 aa36.02■■■■□ 3.36
VPS72-207ENST00000640458 ERCC6Q03468 1493 aa35.93■■■■□ 3.34
VPS72-207ENST00000640458 NCAPD3P42695 1498 aa35.79■■■■□ 3.32
VPS72-207ENST00000640458 ATAD2BQ9ULI0 1458 aa35.6■■■■□ 3.29
VPS72-207ENST00000640458 NESP48681 1621 aa35.5■■■■□ 3.27
VPS72-207ENST00000640458 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
VPS72-207ENST00000640458 HMGXB3Q12766 1538 aa35.42■■■■□ 3.26
VPS72-207ENST00000640458 SMARCA4P51532 1647 aa35.36■■■■□ 3.25
VPS72-207ENST00000640458 BAZ1BQ9UIG0 1483 aaKnown RBP35.23■■■■□ 3.23
VPS72-207ENST00000640458 THOC2Q8NI27 1593 aaKnown RBP35.19■■■■□ 3.22
VPS72-207ENST00000640458 BAZ1AQ9NRL2 1556 aaPredicted RBP35.09■■■■□ 3.21
VPS72-207ENST00000640458 LAMC3Q9Y6N6 1575 aa35.06■■■■□ 3.2
VPS72-207ENST00000640458 TRIM41Q8WV44 630 aa35.05■■■■□ 3.2
VPS72-207ENST00000640458 PEG3Q9GZU2 1588 aa34.98■■■■□ 3.19
VPS72-207ENST00000640458 KIF21AQ7Z4S6 1674 aa34.95■■■■□ 3.19
VPS72-207ENST00000640458 PDS5BQ9NTI5 1447 aa34.94■■■■□ 3.18
VPS72-207ENST00000640458 MROH2BQ7Z745 1585 aa34.82■■■■□ 3.16
VPS72-207ENST00000640458 CADPSQ9ULU8 1353 aa34.7■■■■□ 3.15
VPS72-207ENST00000640458 MRC2Q9UBG0 1479 aa34.66■■■■□ 3.14
VPS72-207ENST00000640458 WDR62O43379 1518 aa34.56■■■■□ 3.12
VPS72-207ENST00000640458 CEP164Q9UPV0 1460 aa34.4■■■■□ 3.1
VPS72-207ENST00000640458 WIZO95785 1651 aa34.37■■■■□ 3.09
VPS72-207ENST00000640458 OSCARQ8IYS5 282 aa34.36■■■■□ 3.09
VPS72-207ENST00000640458 FANCD2Q9BXW9 1451 aa34.31■■■■□ 3.08
VPS72-207ENST00000640458 CFTRP13569 1480 aa34.14■■■■□ 3.06
VPS72-207ENST00000640458 URB2Q14146 1524 aaKnown RBP34.06■■■■□ 3.04
VPS72-207ENST00000640458 RIMBP3CA6NJZ7 1639 aa33.91■■■■□ 3.02
VPS72-207ENST00000640458 RIMBP3BA6NNM3 1639 aa33.91■■■■□ 3.02
VPS72-207ENST00000640458 RIMBP3Q9UFD9 1639 aa33.91■■■■□ 3.02
VPS72-207ENST00000640458 TOP2AP11388 1531 aaKnown RBP33.86■■■■□ 3.01
VPS72-207ENST00000640458 RSF1Q96T23 1441 aaPredicted RBP33.86■■■■□ 3.01
VPS72-207ENST00000640458 ZNF608Q9ULD9 1512 aaPredicted RBP33.78■■■■□ 3
VPS72-207ENST00000640458 ARHGEF11O15085 1522 aa33.74■■■□□ 2.99
VPS72-207ENST00000640458 IFT140Q96RY7 1462 aa33.73■■■□□ 2.99
VPS72-207ENST00000640458 PRDM2Q13029 1718 aa33.66■■■□□ 2.98
VPS72-207ENST00000640458 CYB5RLQ6IPT4 315 aa33.65■■■□□ 2.98
VPS72-207ENST00000640458 TOPBP1Q92547 1522 aa33.58■■■□□ 2.97
VPS72-207ENST00000640458 CCDC88BA6NC98 1476 aa33.53■■■□□ 2.96
VPS72-207ENST00000640458 TRHP20396 242 aaPredicted RBP33.52■■■□□ 2.96
VPS72-207ENST00000640458 EIF4G3O43432 1585 aaKnown RBP33.5■■■□□ 2.95
VPS72-207ENST00000640458 ABCC8Q09428 1581 aa33.43■■■□□ 2.94
VPS72-207ENST00000640458 FBLN2P98095 1184 aa33.41■■■□□ 2.94
VPS72-207ENST00000640458 AQRO60306 1485 aaKnown RBP eCLIP33.41■■■□□ 2.944e-7■■■□□ 16.5
VPS72-207ENST00000640458 CHD1O14646 1710 aa33.39■■■□□ 2.94
VPS72-207ENST00000640458 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
VPS72-207ENST00000640458 DNMBPQ6XZF7 1577 aa33.36■■■□□ 2.93
VPS72-207ENST00000640458 TARBP1Q13395 1621 aaKnown RBP33.29■■■□□ 2.92
VPS72-207ENST00000640458 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
VPS72-207ENST00000640458 RAD54L2Q9Y4B4 1467 aa33.12■■■□□ 2.89
VPS72-207ENST00000640458 TDRD9Q8NDG6 1382 aaKnown RBP33.11■■■□□ 2.89
VPS72-207ENST00000640458 SOGA1O94964 1423 aa33.07■■■□□ 2.88
VPS72-207ENST00000640458 AEBP2Q6ZN18 517 aaPredicted RBP33.04■■■□□ 2.88
VPS72-207ENST00000640458 SNAPC4Q5SXM2 1469 aa33.01■■■□□ 2.88
VPS72-207ENST00000640458 CHMP7Q8WUX9 453 aaPredicted RBP33.01■■■□□ 2.87
VPS72-207ENST00000640458 CLASP1Q7Z460 1538 aa32.97■■■□□ 2.87
VPS72-207ENST00000640458 SYNJ1O43426 1573 aa32.92■■■□□ 2.86
VPS72-207ENST00000640458 FGD5Q6ZNL6 1462 aa32.89■■■□□ 2.86
VPS72-207ENST00000640458 MAGI1Q96QZ7 1491 aaPredicted RBP32.86■■■□□ 2.85
VPS72-207ENST00000640458 WDR97A6NE52 1622 aa32.84■■■□□ 2.85
VPS72-207ENST00000640458 GRIN2BQ13224 1484 aa32.82■■■□□ 2.84
VPS72-207ENST00000640458 SYNJ2O15056 1496 aa32.78■■■□□ 2.84
VPS72-207ENST00000640458 CUX1P39880 1505 aa32.74■■■□□ 2.83
VPS72-207ENST00000640458 GAPVD1Q14C86 1478 aa32.73■■■□□ 2.83
VPS72-207ENST00000640458 SUPT5HO00267 1087 aaKnown RBP32.71■■■□□ 2.83
VPS72-207ENST00000640458 PBRM1Q86U86 1689 aa32.6■■■□□ 2.81
VPS72-207ENST00000640458 ERCC6L2Q5T890 1561 aa32.46■■■□□ 2.79
VPS72-207ENST00000640458 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
VPS72-207ENST00000640458 ABCA5Q8WWZ7 1642 aa32.44■■■□□ 2.78
VPS72-207ENST00000640458 GRIN2AQ12879 1464 aa32.39■■■□□ 2.78
VPS72-207ENST00000640458 CEP170Q5SW79 1584 aa32.33■■■□□ 2.77
VPS72-207ENST00000640458 NUP160Q12769 1436 aa32.29■■■□□ 2.76
VPS72-207ENST00000640458 ADAMTS12P58397 1594 aa32.25■■■□□ 2.75
VPS72-207ENST00000640458 WRNQ14191 1432 aaPredicted RBP eCLIP32.23■■■□□ 2.75
VPS72-207ENST00000640458 SHROOM2Q13796 1616 aa32.18■■■□□ 2.74
VPS72-207ENST00000640458 FHAD1B1AJZ9 1412 aa32.17■■■□□ 2.74
VPS72-207ENST00000640458 KIF13AQ9H1H9 1805 aa32.14■■■□□ 2.74
VPS72-207ENST00000640458 PRG4Q92954 1404 aaPredicted RBP32.09■■■□□ 2.73
VPS72-207ENST00000640458 FAM69CQ0P6D2 419 aa32.04■■■□□ 2.72
VPS72-207ENST00000640458 JPH4Q96JJ6 628 aa32.04■■■□□ 2.72
VPS72-207ENST00000640458 ERICH3Q5RHP9 1530 aa32.02■■■□□ 2.72
VPS72-207ENST00000640458 TOP2BQ02880 1626 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms