RNA–Protein interactions for RNA: ENST00000373277.8

SH2D3C-203, Transcript of SH2 domain containing 3C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SH2D3C, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-203ENST00000373277 NISCHQ9Y2I1 1504 aa35.41■■■■□ 3.26
SH2D3C-203ENST00000373277 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.54
SH2D3C-203ENST00000373277 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
SH2D3C-203ENST00000373277 ZCCHC6Q5VYS8 1495 aaKnown RBP30.01■■■□□ 2.39
SH2D3C-203ENST00000373277 CHIC1Q5VXU3 224 aa29.76■■■□□ 2.36
SH2D3C-203ENST00000373277 MYO15BQ96JP2 1530 aa29.75■■■□□ 2.35
SH2D3C-203ENST00000373277 CCDC180Q9P1Z9 1646 aa29.72■■■□□ 2.35
SH2D3C-203ENST00000373277 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
SH2D3C-203ENST00000373277 HRCP23327 699 aa29.66■■■□□ 2.34
SH2D3C-203ENST00000373277 PCGF6Q9BYE7 350 aa29.46■■■□□ 2.31
SH2D3C-203ENST00000373277 PPARGC1BQ86YN6 1023 aaKnown RBP29.12■■■□□ 2.25
SH2D3C-203ENST00000373277 LOC105371045A0A1W2PR82 267 aa29.04■■■□□ 2.24
SH2D3C-203ENST00000373277 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
SH2D3C-203ENST00000373277 TRIM26Q12899 539 aaPredicted RBP28.66■■■□□ 2.18
SH2D3C-203ENST00000373277 ABCC9O60706 1549 aa28.4■■■□□ 2.14
SH2D3C-203ENST00000373277 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
SH2D3C-203ENST00000373277 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
SH2D3C-203ENST00000373277 FAM9AQ8IZU1 332 aaPredicted RBP28.25■■■□□ 2.11
SH2D3C-203ENST00000373277 SCRIBQ14160 1630 aa28.2■■■□□ 2.11
SH2D3C-203ENST00000373277 ZEB1P37275 1124 aaPredicted RBP28.19■■■□□ 2.1
SH2D3C-203ENST00000373277 EHMT2Q96KQ7 1210 aa28.12■■■□□ 2.09
SH2D3C-203ENST00000373277 RB1CC1Q8TDY2 1594 aa28.06■■■□□ 2.08
SH2D3C-203ENST00000373277 CECR2Q9BXF3 1484 aa27.72■■■□□ 2.03
SH2D3C-203ENST00000373277 SCAF1Q9H7N4 1312 aaKnown RBP27.68■■■□□ 2.02
SH2D3C-203ENST00000373277 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
SH2D3C-203ENST00000373277 PELP1Q8IZL8 1130 aaKnown RBP27.55■■■□□ 2
SH2D3C-203ENST00000373277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.54■■■□□ 2
SH2D3C-203ENST00000373277 WIZO95785 1651 aa27.51■■□□□ 1.99
SH2D3C-203ENST00000373277 CCER1Q8TC90 406 aaPredicted RBP27.48■■□□□ 1.99
SH2D3C-203ENST00000373277 NACADO15069 1562 aa27.45■■□□□ 1.98
SH2D3C-203ENST00000373277 TTBK1Q5TCY1 1321 aaPredicted RBP27.31■■□□□ 1.96
SH2D3C-203ENST00000373277 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.95
SH2D3C-203ENST00000373277 ACIN1Q9UKV3 1341 aaKnown RBP27.23■■□□□ 1.95
SH2D3C-203ENST00000373277 NEUROD1Q13562 356 aa27.2■■□□□ 1.94
SH2D3C-203ENST00000373277 EIF4G1Q04637 1599 aaKnown RBP27.18■■□□□ 1.94
SH2D3C-203ENST00000373277 DIEXFQ68CQ4 756 aaKnown RBP27.17■■□□□ 1.94
SH2D3C-203ENST00000373277 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
SH2D3C-203ENST00000373277 CCDC88BA6NC98 1476 aa27.11■■□□□ 1.93
SH2D3C-203ENST00000373277 CEP162Q5TB80 1403 aa27.05■■□□□ 1.92
SH2D3C-203ENST00000373277 WRNQ14191 1432 aaPredicted RBP eCLIP27.04■■□□□ 1.92
SH2D3C-203ENST00000373277 CENPBP07199 599 aaPredicted RBP27.01■■□□□ 1.91
SH2D3C-203ENST00000373277 GTF3C3Q9Y5Q9 886 aa27■■□□□ 1.91
SH2D3C-203ENST00000373277 SOGA1O94964 1423 aa26.99■■□□□ 1.91
SH2D3C-203ENST00000373277 TOP2AP11388 1531 aaKnown RBP26.98■■□□□ 1.91
SH2D3C-203ENST00000373277 UBTFP17480 764 aaKnown RBP26.95■■□□□ 1.91
SH2D3C-203ENST00000373277 TNIKQ9UKE5 1360 aa26.93■■□□□ 1.9
SH2D3C-203ENST00000373277 CSRNP3Q8WYN3 585 aa26.9■■□□□ 1.9
SH2D3C-203ENST00000373277 SMARCA2P51531 1590 aa26.88■■□□□ 1.89
SH2D3C-203ENST00000373277 SMARCA4P51532 1647 aa26.86■■□□□ 1.89
SH2D3C-203ENST00000373277 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
SH2D3C-203ENST00000373277 ZNF316A6NFI3 1004 aaPredicted RBP26.8■■□□□ 1.88
SH2D3C-203ENST00000373277 EEA1Q15075 1411 aa26.76■■□□□ 1.87
SH2D3C-203ENST00000373277 YTHDC1Q96MU7 727 aaKnown RBP26.69■■□□□ 1.86
SH2D3C-203ENST00000373277 GOLGA3Q08378 1498 aa26.69■■□□□ 1.86
SH2D3C-203ENST00000373277 HNRNPUL2Q1KMD3 747 aaKnown RBP26.68■■□□□ 1.86
SH2D3C-203ENST00000373277 UNC13AQ9UPW8 1703 aa26.54■■□□□ 1.84
SH2D3C-203ENST00000373277 MIER1Q8N108 512 aa26.54■■□□□ 1.84
SH2D3C-203ENST00000373277 PABPN1Q86U42 306 aaKnown RBP eCLIP26.51■■□□□ 1.83
SH2D3C-203ENST00000373277 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
SH2D3C-203ENST00000373277 CLIP1P30622 1438 aa26.47■■□□□ 1.83
SH2D3C-203ENST00000373277 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.82
SH2D3C-203ENST00000373277 APLP2Q06481 763 aa26.44■■□□□ 1.82
SH2D3C-203ENST00000373277 SYNJ1O43426 1573 aa26.39■■□□□ 1.81
SH2D3C-203ENST00000373277 KIF21BO75037 1637 aa26.36■■□□□ 1.81
SH2D3C-203ENST00000373277 VPS8Q8N3P4 1428 aa26.36■■□□□ 1.81
SH2D3C-203ENST00000373277 RAPGEF2Q9Y4G8 1499 aa26.28■■□□□ 1.8
SH2D3C-203ENST00000373277 MYT1Q01538 1121 aa26.25■■□□□ 1.79
SH2D3C-203ENST00000373277 BICRAQ9NZM4 1560 aa26.21■■□□□ 1.79
SH2D3C-203ENST00000373277 BAZ1BQ9UIG0 1483 aaKnown RBP26.21■■□□□ 1.79
SH2D3C-203ENST00000373277 PEG3Q9GZU2 1588 aa26.2■■□□□ 1.79
SH2D3C-203ENST00000373277 ATAD2BQ9ULI0 1458 aa26.1■■□□□ 1.77
SH2D3C-203ENST00000373277 DHX57Q6P158 1386 aaKnown RBP26.04■■□□□ 1.76
SH2D3C-203ENST00000373277 CLSPNQ9HAW4 1339 aa26.01■■□□□ 1.75
SH2D3C-203ENST00000373277 KANK4Q5T7N3 995 aaPredicted RBP26■■□□□ 1.75
SH2D3C-203ENST00000373277 TOP2BQ02880 1626 aa25.95■■□□□ 1.75
SH2D3C-203ENST00000373277 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
SH2D3C-203ENST00000373277 PRXQ9BXM0 1461 aa25.87■■□□□ 1.73
SH2D3C-203ENST00000373277 ERICH3Q5RHP9 1530 aa25.84■■□□□ 1.73
SH2D3C-203ENST00000373277 ITGAEP38570 1179 aa25.84■■□□□ 1.73
SH2D3C-203ENST00000373277 SUPT16HQ9Y5B9 1047 aaKnown RBP25.84■■□□□ 1.73
SH2D3C-203ENST00000373277 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
SH2D3C-203ENST00000373277 RRBP1Q9P2E9 1410 aaKnown RBP25.78■■□□□ 1.72
SH2D3C-203ENST00000373277 CCNB3Q8WWL7 1395 aa25.73■■□□□ 1.71
SH2D3C-203ENST00000373277 KIF27Q86VH2 1401 aa25.7■■□□□ 1.7
SH2D3C-203ENST00000373277 CUX1P39880 1505 aa25.66■■□□□ 1.7
SH2D3C-203ENST00000373277 CUX2O14529 1486 aa25.64■■□□□ 1.69
SH2D3C-203ENST00000373277 ARHGAP35Q9NRY4 1499 aa25.63■■□□□ 1.69
SH2D3C-203ENST00000373277 KCNH8Q96L42 1107 aa25.63■■□□□ 1.69
SH2D3C-203ENST00000373277 RAB3GAP2Q9H2M9 1393 aa25.59■■□□□ 1.69
SH2D3C-203ENST00000373277 TSHZ2Q9NRE2 1034 aa25.54■■□□□ 1.68
SH2D3C-203ENST00000373277 MAPKBP1O60336 1514 aa25.48■■□□□ 1.67
SH2D3C-203ENST00000373277 DDX10Q13206 875 aaKnown RBP25.47■■□□□ 1.67
SH2D3C-203ENST00000373277 SIN3AQ96ST3 1273 aa25.46■■□□□ 1.67
SH2D3C-203ENST00000373277 BCANQ96GW7 911 aa25.45■■□□□ 1.67
SH2D3C-203ENST00000373277 NCAPD3P42695 1498 aa25.45■■□□□ 1.67
SH2D3C-203ENST00000373277 FAM50AQ14320 339 aaKnown RBP25.45■■□□□ 1.66
SH2D3C-203ENST00000373277 SETD5Q9C0A6 1442 aa25.44■■□□□ 1.66
SH2D3C-203ENST00000373277 HMGXB3Q12766 1538 aa25.42■■□□□ 1.66
SH2D3C-203ENST00000373277 CFTRP13569 1480 aa25.41■■□□□ 1.66
SH2D3C-203ENST00000373277 IGF1RP08069 1367 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms