Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.815e-12■□□□□ 11.1
LARP4Q71RC2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.131e-8■□□□□ 11.1
LARP4Q71RC2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.011e-8■□□□□ 11.1
LARP4Q71RC2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.11e-8■□□□□ 11.1
LARP4Q71RC2 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.291e-8■□□□□ 11.1
LARP4Q71RC2 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.41e-8■□□□□ 11.1
LARP4Q71RC2 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.441e-8■□□□□ 11.1
LARP4Q71RC2 AGPAT1-208ENST00000490711 2448 ntTSL 29.78□□□□□ -0.841e-8■□□□□ 11.1
LARP4Q71RC2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.122e-6■□□□□ 11.1
LARP4Q71RC2 TRA2B-214ENST00000487615 4485 ntTSL 1 (best)11.53□□□□□ -0.562e-6■□□□□ 11.1
LARP4Q71RC2 TRA2B-206ENST00000456380 1697 ntTSL 511.19□□□□□ -0.622e-6■□□□□ 11.1
LARP4Q71RC2 LSM3-201ENST00000306024 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.722e-7■□□□□ 11.1
LARP4Q71RC2 TRA2B-204ENST00000414862 710 ntTSL 38.57□□□□□ -1.042e-6■□□□□ 11.1
LARP4Q71RC2 TRA2B-201ENST00000259043 943 ntTSL 37.08□□□□□ -1.282e-6■□□□□ 11.1
LARP4Q71RC2 TRA2B-209ENST00000466832 2414 ntTSL 25.7□□□□□ -1.52e-6■□□□□ 11.1
LARP4Q71RC2 TRA2B-207ENST00000463328 2780 ntTSL 24.92□□□□□ -1.622e-6■□□□□ 11.1
LARP4Q71RC2 TRA2B-215ENST00000492417 4141 ntTSL 1 (best)4.2□□□□□ -1.742e-6■□□□□ 11.1
LARP4Q71RC2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.01■□□□□ 0.791e-10■□□□□ 11.1
LARP4Q71RC2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.1■□□□□ 0.177e-17■□□□□ 11.1
LARP4Q71RC2 EEF1E1-204ENST00000502429 591 ntTSL 37.93□□□□□ -1.147e-17■□□□□ 11.1
LARP4Q71RC2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.567e-17■□□□□ 11.1
LARP4Q71RC2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.597e-17■□□□□ 11.1
LARP4Q71RC2 LRP1-211ENST00000556356 5114 ntTSL 214.56□□□□□ -0.087e-9■□□□□ 11
LARP4Q71RC2 YIF1B-210ENST00000589151 431 ntTSL 215.42■□□□□ 0.068e-8■□□□□ 11
LARP4Q71RC2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.03■□□□□ -08e-8■□□□□ 11
LARP4Q71RC2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.32□□□□□ -0.128e-8■□□□□ 11
LARP4Q71RC2 GPX4-202ENST00000585362 859 ntTSL 223.98■■□□□ 1.432e-9■□□□□ 11
LARP4Q71RC2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.87■□□□□ 0.939e-7■□□□□ 11
LARP4Q71RC2 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.28□□□□□ -0.286e-9■□□□□ 11
LARP4Q71RC2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.524e-9■□□□□ 11
LARP4Q71RC2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.82■■■□□ 2.24e-9■□□□□ 11
LARP4Q71RC2 PPP2CB-207ENST00000520500 603 ntTSL 45.52□□□□□ -1.534e-9■□□□□ 11
LARP4Q71RC2 PPP2CB-202ENST00000518243 577 ntTSL 34.52□□□□□ -1.694e-9■□□□□ 11
LARP4Q71RC2 CNPY2-208ENST00000551286 484 ntTSL 516.14■□□□□ 0.176e-7■□□□□ 11
LARP4Q71RC2 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.331e-7■□□□□ 11
LARP4Q71RC2 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.331e-7■□□□□ 11
LARP4Q71RC2 ATF6B-216ENST00000494022 320 ntTSL 211.47□□□□□ -0.571e-7■□□□□ 11
LARP4Q71RC2 CNPY2-209ENST00000551475 674 ntTSL 510.71□□□□□ -0.696e-7■□□□□ 11
LARP4Q71RC2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.59■■□□□ 1.213e-9■□□□□ 11
LARP4Q71RC2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.863e-9■□□□□ 11
LARP4Q71RC2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.693e-9■□□□□ 11
LARP4Q71RC2 NUTF2-204ENST00000568390 593 ntTSL 314.45□□□□□ -0.14e-7■□□□□ 11
LARP4Q71RC2 NUTF2-202ENST00000567105 582 ntTSL 313.14□□□□□ -0.314e-7■□□□□ 11
LARP4Q71RC2 ATP5J-208ENST00000486002 876 ntTSL 213.1□□□□□ -0.313e-9■□□□□ 11
LARP4Q71RC2 NUTF2-207ENST00000570026 400 ntTSL 212.23□□□□□ -0.454e-7■□□□□ 11
LARP4Q71RC2 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.463e-9■□□□□ 11
LARP4Q71RC2 NUTF2-203ENST00000568233 589 ntTSL 211.82□□□□□ -0.524e-7■□□□□ 11
LARP4Q71RC2 CHD4-203ENST00000535717 660 ntTSL 211.27□□□□□ -0.611e-6■□□□□ 11
LARP4Q71RC2 PFDN5-210ENST00000550513 939 ntTSL 39.83□□□□□ -0.841e-6■□□□□ 11
LARP4Q71RC2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.299e-7■□□□□ 11
LARP4Q71RC2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.059e-7■□□□□ 11
LARP4Q71RC2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.39e-7■□□□□ 11
LARP4Q71RC2 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.449e-7■□□□□ 11
LARP4Q71RC2 TCEAL4-212ENST00000494801 1008 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.949e-7■□□□□ 11
LARP4Q71RC2 TCEAL4-202ENST00000415568 959 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.949e-7■□□□□ 11
LARP4Q71RC2 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.089e-7■□□□□ 11
LARP4Q71RC2 NDUFS8-205ENST00000525419 561 ntTSL 319.38■□□□□ 0.692e-6■□□□□ 11
LARP4Q71RC2 PLD3-213ENST00000488311 750 ntTSL 211.17□□□□□ -0.627e-14■□□□□ 11
LARP4Q71RC2 SRP14-207ENST00000559475 463 ntTSL 28.97□□□□□ -0.975e-10■□□□□ 11
LARP4Q71RC2 NENF-204ENST00000479589 845 ntTSL 221.66■■□□□ 1.063e-6■□□□□ 11
LARP4Q71RC2 NENF-203ENST00000473900 875 ntTSL 219.36■□□□□ 0.693e-6■□□□□ 11
LARP4Q71RC2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.563e-6■□□□□ 11
LARP4Q71RC2 PFN1-202ENST00000572383 539 ntTSL 316.81■□□□□ 0.282e-18■□□□□ 11
LARP4Q71RC2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.371e-6■□□□□ 11
LARP4Q71RC2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.281e-6■□□□□ 11
LARP4Q71RC2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.241e-6■□□□□ 11
LARP4Q71RC2 DCTN2-215ENST00000550201 1527 ntTSL 512.27□□□□□ -0.446e-7■□□□□ 11
LARP4Q71RC2 DCTN2-201ENST00000434715 1677 ntTSL 5 BASIC11.82□□□□□ -0.526e-7■□□□□ 11
LARP4Q71RC2 DCTN2-209ENST00000548249 2061 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.816e-7■□□□□ 11
LARP4Q71RC2 ETFA-201ENST00000267950 1289 ntTSL 519.97■□□□□ 0.791e-6■□□□□ 11
LARP4Q71RC2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.42■□□□□ 0.541e-6■□□□□ 11
LARP4Q71RC2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.42■□□□□ 0.381e-6■□□□□ 11
LARP4Q71RC2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.291e-6■□□□□ 11
LARP4Q71RC2 ETFA-212ENST00000560179 650 ntTSL 29.77□□□□□ -0.851e-6■□□□□ 11
LARP4Q71RC2 ETFA-204ENST00000557975 1086 ntTSL 36.42□□□□□ -1.381e-6■□□□□ 11
LARP4Q71RC2 ETFA-220ENST00000565910 609 ntTSL 35.88□□□□□ -1.471e-6■□□□□ 11
LARP4Q71RC2 NCL-207ENST00000461347 3967 ntTSL 214.24□□□□□ -0.132e-8■□□□□ 11
LARP4Q71RC2 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.492e-8■□□□□ 11
LARP4Q71RC2 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.693e-7■□□□□ 11
LARP4Q71RC2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.48■□□□□ 0.238e-14■□□□□ 11
LARP4Q71RC2 PSMB7-206ENST00000498485 967 ntTSL 512.78□□□□□ -0.365e-9■□□□□ 11
LARP4Q71RC2 PSMB7-201ENST00000259457 980 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.935e-9■□□□□ 11
LARP4Q71RC2 IER3-202ENST00000376377 1350 ntBASIC16.64■□□□□ 0.262e-10■□□□□ 11
LARP4Q71RC2 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.272e-10■□□□□ 11
LARP4Q71RC2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.13■□□□□ 0.336e-12■□□□□ 11
LARP4Q71RC2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.38■□□□□ 0.056e-12■□□□□ 11
LARP4Q71RC2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.452e-15■□□□□ 11
LARP4Q71RC2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.422e-15■□□□□ 11
LARP4Q71RC2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.42e-15■□□□□ 11
LARP4Q71RC2 CTSB-222ENST00000531551 1855 ntTSL 1 (best)16.75■□□□□ 0.272e-15■□□□□ 11
LARP4Q71RC2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.272e-15■□□□□ 11
LARP4Q71RC2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.222e-15■□□□□ 11
LARP4Q71RC2 CTSB-203ENST00000420692 2230 ntTSL 216.15■□□□□ 0.182e-15■□□□□ 11
LARP4Q71RC2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.042e-15■□□□□ 11
LARP4Q71RC2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.142e-15■□□□□ 11
LARP4Q71RC2 CTSB-211ENST00000526481 660 ntTSL 513.77□□□□□ -0.212e-15■□□□□ 11
LARP4Q71RC2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.99■□□□□ 0.312e-8■□□□□ 11
LARP4Q71RC2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.93□□□□□ -0.022e-8■□□□□ 11
LARP4Q71RC2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.77□□□□□ -0.042e-8■□□□□ 11
LARP4Q71RC2 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.252e-8■□□□□ 11
Retrieved 100 of 15,922 protein–RNA pairs in 166.8 ms