RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 AEBP2Q6ZN18 517 aaPredicted RBP31.98■■■□□ 2.71
TRA2B-204ENST00000414862 CHIC1Q5VXU3 224 aa31.46■■■□□ 2.63
TRA2B-204ENST00000414862 PHF23Q9BUL5 403 aaPredicted RBP27.7■■■□□ 2.02
TRA2B-204ENST00000414862 SENP3Q9H4L4 574 aaPredicted RBP27.1■■□□□ 1.93
TRA2B-204ENST00000414862 PLPPR3Q6T4P5 718 aa25.66■■□□□ 1.7
TRA2B-204ENST00000414862 FOXD1Q16676 465 aa25.12■■□□□ 1.61
TRA2B-204ENST00000414862 ADRA2BP18089 450 aa24.37■■□□□ 1.49
TRA2B-204ENST00000414862 PPP6R1Q9UPN7 881 aa24.37■■□□□ 1.49
TRA2B-204ENST00000414862 PIAS4Q8N2W9 510 aaPredicted RBP23.76■■□□□ 1.39
TRA2B-204ENST00000414862 MSH5O43196 834 aa23.07■■□□□ 1.28
TRA2B-204ENST00000414862 PPP4R3CPQ6ZMV5 832 aa22.64■■□□□ 1.21
TRA2B-204ENST00000414862 KCNA4P22459 653 aa22.39■■□□□ 1.17
TRA2B-204ENST00000414862 SCAF1Q9H7N4 1312 aaKnown RBP22.3■■□□□ 1.16
TRA2B-204ENST00000414862 NCBP3Q53F19 620 aaKnown RBP22.12■■□□□ 1.13
TRA2B-204ENST00000414862 MAPK8IP2Q13387 824 aaPredicted RBP22.05■■□□□ 1.12
TRA2B-204ENST00000414862 CNKSR2Q8WXI2 1034 aa21.95■■□□□ 1.1
TRA2B-204ENST00000414862 NPM3O75607 178 aaKnown RBP21.79■■□□□ 1.08
TRA2B-204ENST00000414862 DMRT2Q9Y5R5 561 aa21.66■■□□□ 1.06
TRA2B-204ENST00000414862 RNF216Q9NWF9 866 aaPredicted RBP21.46■■□□□ 1.03
TRA2B-204ENST00000414862 SLC4A1APQ9BWU0 796 aaKnown RBP21.36■■□□□ 1.01
TRA2B-204ENST00000414862 HOXD11P31277 338 aaPredicted RBP21.31■■□□□ 1
TRA2B-204ENST00000414862 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
TRA2B-204ENST00000414862 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
TRA2B-204ENST00000414862 DCAF8L1A6NGE4 600 aa20.76■□□□□ 0.91
TRA2B-204ENST00000414862 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
TRA2B-204ENST00000414862 POTEDQ86YR6 584 aa20.6■□□□□ 0.89
TRA2B-204ENST00000414862 ZBTB22O15209 634 aa20.59■□□□□ 0.89
TRA2B-204ENST00000414862 FOXD4L1Q9NU39 408 aa20.53■□□□□ 0.88
TRA2B-204ENST00000414862 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
TRA2B-204ENST00000414862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.34■□□□□ 0.852e-9■■□□□ 11.4
TRA2B-204ENST00000414862 MYCNP04198 464 aaPredicted RBP20.13■□□□□ 0.81
TRA2B-204ENST00000414862 U3KPZ7 1027 aaPredicted RBP20.01■□□□□ 0.79
TRA2B-204ENST00000414862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.85■□□□□ 0.77
TRA2B-204ENST00000414862 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
TRA2B-204ENST00000414862 ATXN8OSP0DMR3 200 aa19.79■□□□□ 0.76
TRA2B-204ENST00000414862 SAMD1Q6SPF0 538 aaPredicted RBP19.79■□□□□ 0.76
TRA2B-204ENST00000414862 RNF39Q9H2S5 420 aa19.79■□□□□ 0.76
TRA2B-204ENST00000414862 APLP2Q06481 763 aa19.58■□□□□ 0.72
TRA2B-204ENST00000414862 ATF5Q9Y2D1 282 aaPredicted RBP19.58■□□□□ 0.72
TRA2B-204ENST00000414862 C1QBPQ07021 282 aaKnown RBP19.57■□□□□ 0.72
TRA2B-204ENST00000414862 NISCHQ9Y2I1 1504 aa19.45■□□□□ 0.7
TRA2B-204ENST00000414862 SPINK5Q9NQ38 1064 aaPredicted RBP19.4■□□□□ 0.7
TRA2B-204ENST00000414862 CAPN15O75808 1086 aa19.32■□□□□ 0.68
TRA2B-204ENST00000414862 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
TRA2B-204ENST00000414862 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.68
TRA2B-204ENST00000414862 CACNB1Q02641 598 aaPredicted RBP19.13■□□□□ 0.65
TRA2B-204ENST00000414862 POLA2Q14181 598 aa19.02■□□□□ 0.64
TRA2B-204ENST00000414862 ABCB7O75027 752 aa18.96■□□□□ 0.63
TRA2B-204ENST00000414862 DSG3P32926 999 aa18.93■□□□□ 0.62
TRA2B-204ENST00000414862 FBLN2P98095 1184 aa18.74■□□□□ 0.59
TRA2B-204ENST00000414862 MKRN4PQ13434 485 aaPredicted RBP18.73■□□□□ 0.59
TRA2B-204ENST00000414862 ZBTB12Q9Y330 459 aaPredicted RBP18.7■□□□□ 0.58
TRA2B-204ENST00000414862 FKBP8Q14318 412 aa18.69■□□□□ 0.58
TRA2B-204ENST00000414862 SPDYE4A6NLX3 237 aa18.44■□□□□ 0.54
TRA2B-204ENST00000414862 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
TRA2B-204ENST00000414862 SPDYE2BA6NHP3 402 aa18.23■□□□□ 0.51
TRA2B-204ENST00000414862 SPDYE6P0CI01 402 aa18.23■□□□□ 0.51
TRA2B-204ENST00000414862 SPDYE2Q495Y8 402 aa18.23■□□□□ 0.51
TRA2B-204ENST00000414862 ZNF692Q9BU19 519 aaPredicted RBP18.21■□□□□ 0.51
TRA2B-204ENST00000414862 PROM2Q8N271 834 aa18.14■□□□□ 0.49
TRA2B-204ENST00000414862 SSUH2Q9Y2M2 353 aa18.1■□□□□ 0.49
TRA2B-204ENST00000414862 RBM42Q9BTD8 480 aaKnown RBP18.02■□□□□ 0.48
TRA2B-204ENST00000414862 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
TRA2B-204ENST00000414862 ABCC9O60706 1549 aa17.95■□□□□ 0.46
TRA2B-204ENST00000414862 FBXO3Q9UK99 471 aa17.95■□□□□ 0.46
TRA2B-204ENST00000414862 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
TRA2B-204ENST00000414862 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
TRA2B-204ENST00000414862 VASPP50552 380 aaPredicted RBP17.7■□□□□ 0.42
TRA2B-204ENST00000414862 REM2Q8IYK8 340 aaPredicted RBP17.69■□□□□ 0.42
TRA2B-204ENST00000414862 SPDYE1Q8NFV5 336 aaPredicted RBP17.64■□□□□ 0.41
TRA2B-204ENST00000414862 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
TRA2B-204ENST00000414862 CLEC11AQ9Y240 323 aa17.57■□□□□ 0.4
TRA2B-204ENST00000414862 IFNLR1Q8IU57 520 aaPredicted RBP17.49■□□□□ 0.39
TRA2B-204ENST00000414862 MIER1Q8N108 512 aa17.48■□□□□ 0.39
TRA2B-204ENST00000414862 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
TRA2B-204ENST00000414862 PITPNM1O00562 1244 aa17.47■□□□□ 0.39
TRA2B-204ENST00000414862 PRR29P0C7W0 189 aa17.44■□□□□ 0.38
TRA2B-204ENST00000414862 AMER1Q5JTC6 1135 aaPredicted RBP17.43■□□□□ 0.38
TRA2B-204ENST00000414862 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
TRA2B-204ENST00000414862 PLEKHG5O94827 1062 aa17.37■□□□□ 0.37
TRA2B-204ENST00000414862 KLHL34Q8N239 644 aa17.37■□□□□ 0.37
TRA2B-204ENST00000414862 CREBZFQ9NS37 354 aa17.25■□□□□ 0.35
TRA2B-204ENST00000414862 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
TRA2B-204ENST00000414862 SPOCK2Q92563 424 aa17.24■□□□□ 0.35
TRA2B-204ENST00000414862 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
TRA2B-204ENST00000414862 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
TRA2B-204ENST00000414862 FXR2P51116 673 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRA2B-204ENST00000414862 MNX1P50219 401 aaPredicted RBP17.09■□□□□ 0.33
TRA2B-204ENST00000414862 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
TRA2B-204ENST00000414862 PIP4P2Q8N4L2 257 aa17.02■□□□□ 0.32
TRA2B-204ENST00000414862 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
TRA2B-204ENST00000414862 NUBP1P53384 320 aa16.99■□□□□ 0.31
TRA2B-204ENST00000414862 PKD2Q13563 968 aa16.98■□□□□ 0.31
TRA2B-204ENST00000414862 FARP1Q9Y4F1 1045 aaPredicted RBP16.97■□□□□ 0.31
TRA2B-204ENST00000414862 RB1CC1Q8TDY2 1594 aa16.95■□□□□ 0.3
TRA2B-204ENST00000414862 CIZ1Q9ULV3 898 aaPredicted RBP16.95■□□□□ 0.3
TRA2B-204ENST00000414862 GSE1Q14687 1217 aa16.87■□□□□ 0.29
TRA2B-204ENST00000414862 DCAF8Q5TAQ9 597 aa16.87■□□□□ 0.29
TRA2B-204ENST00000414862 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
TRA2B-204ENST00000414862 FAM212AQ96EL1 285 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms