RNA–Protein interactions for RNA: ENST00000560726.5

ETFA-216, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3 BASIC

Gene ETFA, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-216ENST00000560726 NISCHQ9Y2I1 1504 aa45.68■■■■■ 4.9
ETFA-216ENST00000560726 CCDC180Q9P1Z9 1646 aa40.66■■■■■ 4.1
ETFA-216ENST00000560726 ABCC9O60706 1549 aa40.11■■■■■ 4.01
ETFA-216ENST00000560726 RB1CC1Q8TDY2 1594 aa38.4■■■■□ 3.74
ETFA-216ENST00000560726 DCAF8L2P0C7V8 631 aa38.31■■■■□ 3.72
ETFA-216ENST00000560726 NACADO15069 1562 aa38.3■■■■□ 3.72
ETFA-216ENST00000560726 ZCCHC6Q5VYS8 1495 aaKnown RBP38■■■■□ 3.67
ETFA-216ENST00000560726 MYO15BQ96JP2 1530 aa37.98■■■■□ 3.67
ETFA-216ENST00000560726 DCAF1Q9Y4B6 1507 aa37.74■■■■□ 3.63
ETFA-216ENST00000560726 UNC13AQ9UPW8 1703 aa37.58■■■■□ 3.61
ETFA-216ENST00000560726 PABPN1Q86U42 306 aaKnown RBP eCLIP37.48■■■■□ 3.59
ETFA-216ENST00000560726 BICRAQ9NZM4 1560 aa37.32■■■■□ 3.56
ETFA-216ENST00000560726 SCRIBQ14160 1630 aa37.15■■■■□ 3.54
ETFA-216ENST00000560726 DNAJC5BQ9UF47 199 aa37.11■■■■□ 3.53
ETFA-216ENST00000560726 SHROOM4Q9ULL8 1493 aa36.79■■■■□ 3.48
ETFA-216ENST00000560726 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.41
ETFA-216ENST00000560726 CC2D2AQ9P2K1 1620 aa36.25■■■■□ 3.39
ETFA-216ENST00000560726 CECR2Q9BXF3 1484 aa36.05■■■■□ 3.36
ETFA-216ENST00000560726 SMARCA4P51532 1647 aa35.49■■■■□ 3.27
ETFA-216ENST00000560726 BAZ1AQ9NRL2 1556 aaPredicted RBP35.39■■■■□ 3.26
ETFA-216ENST00000560726 NCAPD3P42695 1498 aa35.37■■■■□ 3.25
ETFA-216ENST00000560726 ATAD2BQ9ULI0 1458 aa35.37■■■■□ 3.25
ETFA-216ENST00000560726 SMARCA2P51531 1590 aa35.27■■■■□ 3.24
ETFA-216ENST00000560726 MROH2BQ7Z745 1585 aa35.24■■■■□ 3.23
ETFA-216ENST00000560726 HMGXB3Q12766 1538 aa35.15■■■■□ 3.22
ETFA-216ENST00000560726 PEG3Q9GZU2 1588 aa35.13■■■■□ 3.21
ETFA-216ENST00000560726 BAZ1BQ9UIG0 1483 aaKnown RBP35.04■■■■□ 3.2
ETFA-216ENST00000560726 WIZO95785 1651 aa34.84■■■■□ 3.17
ETFA-216ENST00000560726 RSF1Q96T23 1441 aaPredicted RBP34.73■■■■□ 3.15
ETFA-216ENST00000560726 NESP48681 1621 aa34.66■■■■□ 3.14
ETFA-216ENST00000560726 ERCC6Q03468 1493 aa34.54■■■■□ 3.12
ETFA-216ENST00000560726 LAMC3Q9Y6N6 1575 aa34.45■■■■□ 3.11
ETFA-216ENST00000560726 TOP2AP11388 1531 aaKnown RBP34.41■■■■□ 3.1
ETFA-216ENST00000560726 CADPSQ9ULU8 1353 aa34.34■■■■□ 3.09
ETFA-216ENST00000560726 CUX2O14529 1486 aa34.24■■■■□ 3.07
ETFA-216ENST00000560726 PDS5BQ9NTI5 1447 aa34.23■■■■□ 3.07
ETFA-216ENST00000560726 KIF21AQ7Z4S6 1674 aa34.2■■■■□ 3.07
ETFA-216ENST00000560726 THOC2Q8NI27 1593 aaKnown RBP34.14■■■■□ 3.06
ETFA-216ENST00000560726 CFTRP13569 1480 aa34.08■■■■□ 3.05
ETFA-216ENST00000560726 CCDC88BA6NC98 1476 aa34.05■■■■□ 3.04
ETFA-216ENST00000560726 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.02
ETFA-216ENST00000560726 MRC2Q9UBG0 1479 aa33.91■■■■□ 3.02
ETFA-216ENST00000560726 CEP164Q9UPV0 1460 aa33.91■■■■□ 3.02
ETFA-216ENST00000560726 WDR62O43379 1518 aa33.81■■■■□ 3
ETFA-216ENST00000560726 PRDM2Q13029 1718 aa33.76■■■□□ 2.99
ETFA-216ENST00000560726 SUPT5HO00267 1087 aaKnown RBP33.71■■■□□ 2.99
ETFA-216ENST00000560726 URB2Q14146 1524 aaKnown RBP33.65■■■□□ 2.98
ETFA-216ENST00000560726 DNAJC5Q9H3Z4 198 aa33.54■■■□□ 2.96
ETFA-216ENST00000560726 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
ETFA-216ENST00000560726 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
ETFA-216ENST00000560726 DNMBPQ6XZF7 1577 aa33.3■■■□□ 2.92
ETFA-216ENST00000560726 IFT140Q96RY7 1462 aa33.21■■■□□ 2.91
ETFA-216ENST00000560726 ZNF608Q9ULD9 1512 aaPredicted RBP33.14■■■□□ 2.9
ETFA-216ENST00000560726 POLA1P09884 1462 aaPredicted RBP33.09■■■□□ 2.89
ETFA-216ENST00000560726 CUX1P39880 1505 aa33.06■■■□□ 2.88
ETFA-216ENST00000560726 TARBP1Q13395 1621 aaKnown RBP33.04■■■□□ 2.88
ETFA-216ENST00000560726 FGD5Q6ZNL6 1462 aa32.98■■■□□ 2.87
ETFA-216ENST00000560726 RAD54L2Q9Y4B4 1467 aa32.98■■■□□ 2.87
ETFA-216ENST00000560726 EIF4G3O43432 1585 aaKnown RBP32.96■■■□□ 2.87
ETFA-216ENST00000560726 SOGA1O94964 1423 aa32.95■■■□□ 2.87
ETFA-216ENST00000560726 AQRO60306 1485 aaKnown RBP eCLIP32.92■■■□□ 2.864e-6■□□□□ 10.1
ETFA-216ENST00000560726 TDRD9Q8NDG6 1382 aaKnown RBP32.83■■■□□ 2.85
ETFA-216ENST00000560726 OSCARQ8IYS5 282 aa32.82■■■□□ 2.84
ETFA-216ENST00000560726 WRNQ14191 1432 aaPredicted RBP eCLIP32.73■■■□□ 2.83
ETFA-216ENST00000560726 SYNJ1O43426 1573 aa32.69■■■□□ 2.82
ETFA-216ENST00000560726 WDR97A6NE52 1622 aa32.69■■■□□ 2.82
ETFA-216ENST00000560726 TOP2BQ02880 1626 aa32.67■■■□□ 2.82
ETFA-216ENST00000560726 BIVM-ERCC5R4GMW8 1640 aa32.67■■■□□ 2.82
ETFA-216ENST00000560726 ABCA10Q8WWZ4 1543 aa32.62■■■□□ 2.81
ETFA-216ENST00000560726 CHD1O14646 1710 aa32.59■■■□□ 2.81
ETFA-216ENST00000560726 SNAPC4Q5SXM2 1469 aa32.59■■■□□ 2.81
ETFA-216ENST00000560726 GRIN2BQ13224 1484 aa32.57■■■□□ 2.8
ETFA-216ENST00000560726 FBLN2P98095 1184 aa32.56■■■□□ 2.8
ETFA-216ENST00000560726 GAPVD1Q14C86 1478 aa32.54■■■□□ 2.8
ETFA-216ENST00000560726 ABCA5Q8WWZ7 1642 aa32.51■■■□□ 2.8
ETFA-216ENST00000560726 MAGI1Q96QZ7 1491 aaPredicted RBP32.49■■■□□ 2.79
ETFA-216ENST00000560726 PBRM1Q86U86 1689 aa32.48■■■□□ 2.79
ETFA-216ENST00000560726 CHMP7Q8WUX9 453 aaPredicted RBP32.41■■■□□ 2.78
ETFA-216ENST00000560726 SYNJ2O15056 1496 aa32.38■■■□□ 2.77
ETFA-216ENST00000560726 TRIM41Q8WV44 630 aa32.35■■■□□ 2.77
ETFA-216ENST00000560726 RIMBP3CA6NJZ7 1639 aa32.33■■■□□ 2.77
ETFA-216ENST00000560726 RIMBP3BA6NNM3 1639 aa32.33■■■□□ 2.77
ETFA-216ENST00000560726 RIMBP3Q9UFD9 1639 aa32.33■■■□□ 2.77
ETFA-216ENST00000560726 ARHGEF11O15085 1522 aa32.3■■■□□ 2.76
ETFA-216ENST00000560726 CLASP1Q7Z460 1538 aa32.23■■■□□ 2.75
ETFA-216ENST00000560726 ADAMTS12P58397 1594 aa32.22■■■□□ 2.75
ETFA-216ENST00000560726 ERICH3Q5RHP9 1530 aa32.21■■■□□ 2.75
ETFA-216ENST00000560726 FHAD1B1AJZ9 1412 aa32.16■■■□□ 2.74
ETFA-216ENST00000560726 GRIN2AQ12879 1464 aa32.16■■■□□ 2.74
ETFA-216ENST00000560726 KIF27Q86VH2 1401 aa32.05■■■□□ 2.72
ETFA-216ENST00000560726 CYB5RLQ6IPT4 315 aa32.04■■■□□ 2.72
ETFA-216ENST00000560726 ARAP1Q96P48 1450 aa32.03■■■□□ 2.72
ETFA-216ENST00000560726 CEP170Q5SW79 1584 aa32.03■■■□□ 2.72
ETFA-216ENST00000560726 NUP160Q12769 1436 aa32.03■■■□□ 2.72
ETFA-216ENST00000560726 IGF1RP08069 1367 aa32■■■□□ 2.71
ETFA-216ENST00000560726 CUL7Q14999 1698 aa31.86■■■□□ 2.69
ETFA-216ENST00000560726 ERCC6L2Q5T890 1561 aa31.83■■■□□ 2.69
ETFA-216ENST00000560726 SHROOM2Q13796 1616 aa31.8■■■□□ 2.68
ETFA-216ENST00000560726 CARMIL1Q5VZK9 1371 aa31.79■■■□□ 2.68
ETFA-216ENST00000560726 RUSC2Q8N2Y8 1516 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms