RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
TRA2B-207ENST00000463328 AEBP2Q6ZN18 517 aaPredicted RBP11.08□□□□□ -0.64
TRA2B-207ENST00000463328 NISCHQ9Y2I1 1504 aa10.76□□□□□ -0.69
TRA2B-207ENST00000463328 CHIC1Q5VXU3 224 aa10.62□□□□□ -0.71
TRA2B-207ENST00000463328 EHMT2Q96KQ7 1210 aa10.43□□□□□ -0.74
TRA2B-207ENST00000463328 PLPPR3Q6T4P5 718 aa10.28□□□□□ -0.76
TRA2B-207ENST00000463328 RTN4Q9NQC3 1192 aaKnown RBP10.15□□□□□ -0.78
TRA2B-207ENST00000463328 DAXXQ9UER7 740 aaPredicted RBP10.15□□□□□ -0.78
TRA2B-207ENST00000463328 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
TRA2B-207ENST00000463328 KCNA4P22459 653 aa9.8□□□□□ -0.84
TRA2B-207ENST00000463328 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
TRA2B-207ENST00000463328 SENP3Q9H4L4 574 aaPredicted RBP9.78□□□□□ -0.84
TRA2B-207ENST00000463328 AMER1Q5JTC6 1135 aaPredicted RBP9.78□□□□□ -0.84
TRA2B-207ENST00000463328 CSRNP3Q8WYN3 585 aa9.73□□□□□ -0.85
TRA2B-207ENST00000463328 APLP2Q06481 763 aa9.7□□□□□ -0.86
TRA2B-207ENST00000463328 PHF23Q9BUL5 403 aaPredicted RBP9.65□□□□□ -0.86
TRA2B-207ENST00000463328 TTBK1Q5TCY1 1321 aaPredicted RBP9.59□□□□□ -0.88
TRA2B-207ENST00000463328 TIMELESSQ9UNS1 1208 aa9.58□□□□□ -0.88
TRA2B-207ENST00000463328 ARXQ96QS3 562 aa9.54□□□□□ -0.88
TRA2B-207ENST00000463328 PELP1Q8IZL8 1130 aaKnown RBP9.51□□□□□ -0.89
TRA2B-207ENST00000463328 MYT1Q01538 1121 aa9.5□□□□□ -0.89
TRA2B-207ENST00000463328 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
TRA2B-207ENST00000463328 TULP1O00294 542 aaPredicted RBP9.39□□□□□ -0.91
TRA2B-207ENST00000463328 TAOK2Q9UL54 1235 aa9.38□□□□□ -0.91
TRA2B-207ENST00000463328 CCDC180Q9P1Z9 1646 aa9.34□□□□□ -0.91
TRA2B-207ENST00000463328 POTEDQ86YR6 584 aa9.34□□□□□ -0.91
TRA2B-207ENST00000463328 KLHL34Q8N239 644 aa9.26□□□□□ -0.93
TRA2B-207ENST00000463328 HOMEZQ8IX15 550 aa9.23□□□□□ -0.93
TRA2B-207ENST00000463328 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
TRA2B-207ENST00000463328 RANGAP1P46060 587 aaPredicted RBP9.2□□□□□ -0.94
TRA2B-207ENST00000463328 BCANQ96GW7 911 aa9.18□□□□□ -0.94
TRA2B-207ENST00000463328 SLC4A1APQ9BWU0 796 aaKnown RBP9.12□□□□□ -0.95
TRA2B-207ENST00000463328 PODXL2Q9NZ53 605 aa9.12□□□□□ -0.95
TRA2B-207ENST00000463328 ZCCHC6Q5VYS8 1495 aaKnown RBP9.08□□□□□ -0.96
TRA2B-207ENST00000463328 EIF5BO60841 1220 aaKnown RBP9.07□□□□□ -0.96
TRA2B-207ENST00000463328 PLCB2Q00722 1185 aa9.07□□□□□ -0.96
TRA2B-207ENST00000463328 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
TRA2B-207ENST00000463328 FOXD1Q16676 465 aa9.01□□□□□ -0.97
TRA2B-207ENST00000463328 DCAF1Q9Y4B6 1507 aa8.99□□□□□ -0.97
TRA2B-207ENST00000463328 HAP1P54257 671 aaPredicted RBP8.95□□□□□ -0.98
TRA2B-207ENST00000463328 ZBTB22O15209 634 aa8.92□□□□□ -0.98
TRA2B-207ENST00000463328 PLEKHG5O94827 1062 aa8.9□□□□□ -0.98
TRA2B-207ENST00000463328 NPM2Q86SE8 214 aaKnown RBP8.89□□□□□ -0.99
TRA2B-207ENST00000463328 TMEM132AQ24JP5 1023 aa8.86□□□□□ -0.99
TRA2B-207ENST00000463328 MSH5O43196 834 aa8.84□□□□□ -0.99
TRA2B-207ENST00000463328 MYO15BQ96JP2 1530 aa8.83□□□□□ -1
TRA2B-207ENST00000463328 C14orf37Q86TY3 774 aa8.79□□□□□ -1
TRA2B-207ENST00000463328 TRIM26Q12899 539 aaPredicted RBP8.78□□□□□ -1
TRA2B-207ENST00000463328 DCAF8L2P0C7V8 631 aa8.77□□□□□ -1.01
TRA2B-207ENST00000463328 ADRA2BP18089 450 aa8.77□□□□□ -1.01
TRA2B-207ENST00000463328 KDM2AQ9Y2K7 1162 aa8.76□□□□□ -1.01
TRA2B-207ENST00000463328 LOC105371045A0A1W2PR82 267 aa8.73□□□□□ -1.01
TRA2B-207ENST00000463328 SHROOM4Q9ULL8 1493 aa8.72□□□□□ -1.01
TRA2B-207ENST00000463328 VSIG10Q8N0Z9 540 aa8.71□□□□□ -1.01
TRA2B-207ENST00000463328 NACADO15069 1562 aa8.7□□□□□ -1.02
TRA2B-207ENST00000463328 SUPT5HO00267 1087 aaKnown RBP8.69□□□□□ -1.02
TRA2B-207ENST00000463328 HRCP23327 699 aa8.69□□□□□ -1.02
TRA2B-207ENST00000463328 FBXO3Q9UK99 471 aa8.69□□□□□ -1.02
TRA2B-207ENST00000463328 FBLN2P98095 1184 aa8.67□□□□□ -1.02
TRA2B-207ENST00000463328 ABCC9O60706 1549 aa8.66□□□□□ -1.02
TRA2B-207ENST00000463328 UBTFP17480 764 aaKnown RBP8.66□□□□□ -1.02
TRA2B-207ENST00000463328 FKBP8Q14318 412 aa8.64□□□□□ -1.03
TRA2B-207ENST00000463328 RB1CC1Q8TDY2 1594 aa8.58□□□□□ -1.04
TRA2B-207ENST00000463328 NPM3O75607 178 aaKnown RBP8.54□□□□□ -1.04
TRA2B-207ENST00000463328 PPP6R1Q9UPN7 881 aa8.52□□□□□ -1.05
TRA2B-207ENST00000463328 SCRIBQ14160 1630 aa8.49□□□□□ -1.05
TRA2B-207ENST00000463328 BCL11AQ9H165 835 aa8.46□□□□□ -1.06
TRA2B-207ENST00000463328 CHMP4AQ9BY43 222 aa8.44□□□□□ -1.06
TRA2B-207ENST00000463328 PDIA4P13667 645 aaKnown RBP8.43□□□□□ -1.06
TRA2B-207ENST00000463328 RSF1Q96T23 1441 aaPredicted RBP8.4□□□□□ -1.06
TRA2B-207ENST00000463328 SAMD1Q6SPF0 538 aaPredicted RBP8.4□□□□□ -1.06
TRA2B-207ENST00000463328 IGSF3O75054 1194 aa8.39□□□□□ -1.07
TRA2B-207ENST00000463328 PIAS4Q8N2W9 510 aaPredicted RBP8.35□□□□□ -1.07
TRA2B-207ENST00000463328 UBE2Q2Q8WVN8 375 aa8.33□□□□□ -1.08
TRA2B-207ENST00000463328 DHX37Q8IY37 1157 aaKnown RBP8.32□□□□□ -1.08
TRA2B-207ENST00000463328 CNKSR2Q8WXI2 1034 aa8.32□□□□□ -1.08
TRA2B-207ENST00000463328 UNC13AQ9UPW8 1703 aa8.32□□□□□ -1.08
TRA2B-207ENST00000463328 BAZ1AQ9NRL2 1556 aaPredicted RBP8.29□□□□□ -1.08
TRA2B-207ENST00000463328 FAM9AQ8IZU1 332 aaPredicted RBP8.28□□□□□ -1.08
TRA2B-207ENST00000463328 CECR2Q9BXF3 1484 aa8.28□□□□□ -1.08
TRA2B-207ENST00000463328 MROH2BQ7Z745 1585 aa8.28□□□□□ -1.08
TRA2B-207ENST00000463328 CDK11BP21127 795 aaKnown RBP8.27□□□□□ -1.09
TRA2B-207ENST00000463328 CDK11AQ9UQ88 783 aaPredicted RBP8.27□□□□□ -1.09
TRA2B-207ENST00000463328 TSHZ2Q9NRE2 1034 aa8.26□□□□□ -1.09
TRA2B-207ENST00000463328 TRHP20396 242 aaPredicted RBP8.25□□□□□ -1.09
TRA2B-207ENST00000463328 DNAJC5Q9H3Z4 198 aa8.24□□□□□ -1.09
TRA2B-207ENST00000463328 BICRAQ9NZM4 1560 aa8.24□□□□□ -1.09
TRA2B-207ENST00000463328 PAXIP1Q6ZW49 1069 aaPredicted RBP8.24□□□□□ -1.09
TRA2B-207ENST00000463328 SMARCA4P51532 1647 aa8.22□□□□□ -1.09
TRA2B-207ENST00000463328 NBR1Q14596 966 aa8.22□□□□□ -1.09
TRA2B-207ENST00000463328 WIZO95785 1651 aa8.21□□□□□ -1.09
TRA2B-207ENST00000463328 CFAP44Q96MT7 982 aa8.21□□□□□ -1.1
TRA2B-207ENST00000463328 PDE4CQ08493 712 aa8.21□□□□□ -1.1
TRA2B-207ENST00000463328 FOXD4L1Q9NU39 408 aa8.21□□□□□ -1.1
TRA2B-207ENST00000463328 PPP4R3CPQ6ZMV5 832 aa8.2□□□□□ -1.1
TRA2B-207ENST00000463328 BRD2P25440 801 aaKnown RBP8.19□□□□□ -1.1
TRA2B-207ENST00000463328 PEG3Q9GZU2 1588 aa8.18□□□□□ -1.1
TRA2B-207ENST00000463328 NPM1P06748 294 aaKnown RBP eCLIP8.18□□□□□ -1.1
TRA2B-207ENST00000463328 PABPN1Q86U42 306 aaKnown RBP eCLIP8.18□□□□□ -1.1
TRA2B-207ENST00000463328 NECTIN2Q92692 538 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms