RNA–Protein interactions for RNA: ENST00000267950.12

ETFA-201, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 1,289 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-201ENST00000267950 NISCHQ9Y2I1 1504 aa51.6■■■■■ 5.85
ETFA-201ENST00000267950 CCDC180Q9P1Z9 1646 aa45.86■■■■■ 4.93
ETFA-201ENST00000267950 ABCC9O60706 1549 aa44.5■■■■■ 4.71
ETFA-201ENST00000267950 ZCCHC6Q5VYS8 1495 aaKnown RBP43.06■■■■■ 4.48
ETFA-201ENST00000267950 DCAF8L2P0C7V8 631 aa43■■■■■ 4.47
ETFA-201ENST00000267950 RB1CC1Q8TDY2 1594 aa42.97■■■■■ 4.47
ETFA-201ENST00000267950 NACADO15069 1562 aa42.96■■■■■ 4.47
ETFA-201ENST00000267950 MYO15BQ96JP2 1530 aa42.73■■■■■ 4.43
ETFA-201ENST00000267950 DCAF1Q9Y4B6 1507 aa42.68■■■■■ 4.42
ETFA-201ENST00000267950 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
ETFA-201ENST00000267950 SCRIBQ14160 1630 aa41.87■■■■■ 4.29
ETFA-201ENST00000267950 BICRAQ9NZM4 1560 aa41.65■■■■■ 4.26
ETFA-201ENST00000267950 PABPN1Q86U42 306 aaKnown RBP eCLIP41.59■■■■■ 4.25
ETFA-201ENST00000267950 SHROOM4Q9ULL8 1493 aa41.15■■■■■ 4.18
ETFA-201ENST00000267950 EIF4G1Q04637 1599 aaKnown RBP40.52■■■■■ 4.08
ETFA-201ENST00000267950 DNAJC5BQ9UF47 199 aa40.48■■■■■ 4.07
ETFA-201ENST00000267950 CC2D2AQ9P2K1 1620 aa40.32■■■■■ 4.05
ETFA-201ENST00000267950 CECR2Q9BXF3 1484 aa40.17■■■■■ 4.02
ETFA-201ENST00000267950 SMARCA4P51532 1647 aa40.05■■■■■ 4
ETFA-201ENST00000267950 BAZ1AQ9NRL2 1556 aaPredicted RBP40.01■■■■□ 3.99
ETFA-201ENST00000267950 MROH2BQ7Z745 1585 aa39.8■■■■□ 3.96
ETFA-201ENST00000267950 SMARCA2P51531 1590 aa39.67■■■■□ 3.94
ETFA-201ENST00000267950 ATAD2BQ9ULI0 1458 aa39.67■■■■□ 3.94
ETFA-201ENST00000267950 PEG3Q9GZU2 1588 aa39.59■■■■□ 3.93
ETFA-201ENST00000267950 NCAPD3P42695 1498 aa39.56■■■■□ 3.92
ETFA-201ENST00000267950 WIZO95785 1651 aa39.48■■■■□ 3.91
ETFA-201ENST00000267950 HMGXB3Q12766 1538 aa39.47■■■■□ 3.91
ETFA-201ENST00000267950 BAZ1BQ9UIG0 1483 aaKnown RBP39.4■■■■□ 3.9
ETFA-201ENST00000267950 RSF1Q96T23 1441 aaPredicted RBP39.4■■■■□ 3.9
ETFA-201ENST00000267950 TOP2AP11388 1531 aaKnown RBP39■■■■□ 3.83
ETFA-201ENST00000267950 SUPT5HO00267 1087 aaKnown RBP38.67■■■■□ 3.78
ETFA-201ENST00000267950 NESP48681 1621 aa38.61■■■■□ 3.77
ETFA-201ENST00000267950 LAMC3Q9Y6N6 1575 aa38.57■■■■□ 3.77
ETFA-201ENST00000267950 CCDC88BA6NC98 1476 aa38.5■■■■□ 3.75
ETFA-201ENST00000267950 CADPSQ9ULU8 1353 aa38.44■■■■□ 3.74
ETFA-201ENST00000267950 ERCC6Q03468 1493 aa38.34■■■■□ 3.73
ETFA-201ENST00000267950 KIF21AQ7Z4S6 1674 aa38.3■■■■□ 3.72
ETFA-201ENST00000267950 PRDM2Q13029 1718 aa38.29■■■■□ 3.72
ETFA-201ENST00000267950 CFTRP13569 1480 aa38.28■■■■□ 3.72
ETFA-201ENST00000267950 PDS5BQ9NTI5 1447 aa38.22■■■■□ 3.71
ETFA-201ENST00000267950 FANCD2Q9BXW9 1451 aa38.04■■■■□ 3.68
ETFA-201ENST00000267950 THOC2Q8NI27 1593 aaKnown RBP38.01■■■■□ 3.67
ETFA-201ENST00000267950 CEP164Q9UPV0 1460 aa37.99■■■■□ 3.67
ETFA-201ENST00000267950 MRC2Q9UBG0 1479 aa37.86■■■■□ 3.65
ETFA-201ENST00000267950 CUX2O14529 1486 aa37.79■■■■□ 3.64
ETFA-201ENST00000267950 WDR62O43379 1518 aa37.74■■■■□ 3.63
ETFA-201ENST00000267950 URB2Q14146 1524 aaKnown RBP37.66■■■■□ 3.62
ETFA-201ENST00000267950 DNMBPQ6XZF7 1577 aa37.5■■■■□ 3.59
ETFA-201ENST00000267950 TOPBP1Q92547 1522 aa37.49■■■■□ 3.59
ETFA-201ENST00000267950 ABCC8Q09428 1581 aa37.47■■■■□ 3.59
ETFA-201ENST00000267950 CUX1P39880 1505 aa37.33■■■■□ 3.57
ETFA-201ENST00000267950 POLA1P09884 1462 aaPredicted RBP37.17■■■■□ 3.54
ETFA-201ENST00000267950 BIVM-ERCC5R4GMW8 1640 aa37.16■■■■□ 3.54
ETFA-201ENST00000267950 WRNQ14191 1432 aaPredicted RBP eCLIP37.16■■■■□ 3.54
ETFA-201ENST00000267950 FGD5Q6ZNL6 1462 aa37.15■■■■□ 3.54
ETFA-201ENST00000267950 IFT140Q96RY7 1462 aa37.14■■■■□ 3.54
ETFA-201ENST00000267950 SYNJ1O43426 1573 aa37.13■■■■□ 3.53
ETFA-201ENST00000267950 TOP2BQ02880 1626 aa37.11■■■■□ 3.53
ETFA-201ENST00000267950 TARBP1Q13395 1621 aaKnown RBP37.1■■■■□ 3.53
ETFA-201ENST00000267950 RAD54L2Q9Y4B4 1467 aa37.02■■■■□ 3.52
ETFA-201ENST00000267950 SOGA1O94964 1423 aa37.01■■■■□ 3.51
ETFA-201ENST00000267950 ZNF608Q9ULD9 1512 aaPredicted RBP36.97■■■■□ 3.51
ETFA-201ENST00000267950 WDR97A6NE52 1622 aa36.94■■■■□ 3.5
ETFA-201ENST00000267950 EIF4G3O43432 1585 aaKnown RBP36.92■■■■□ 3.5
ETFA-201ENST00000267950 AQRO60306 1485 aaKnown RBP eCLIP36.79■■■■□ 3.484e-6■□□□□ 10.1
ETFA-201ENST00000267950 ABCA10Q8WWZ4 1543 aa36.77■■■■□ 3.48
ETFA-201ENST00000267950 TDRD9Q8NDG6 1382 aaKnown RBP36.75■■■■□ 3.47
ETFA-201ENST00000267950 PBRM1Q86U86 1689 aa36.69■■■■□ 3.46
ETFA-201ENST00000267950 ABCA5Q8WWZ7 1642 aa36.68■■■■□ 3.46
ETFA-201ENST00000267950 GAPVD1Q14C86 1478 aa36.61■■■■□ 3.45
ETFA-201ENST00000267950 GRIN2BQ13224 1484 aa36.55■■■■□ 3.44
ETFA-201ENST00000267950 CHD1O14646 1710 aa36.5■■■■□ 3.43
ETFA-201ENST00000267950 SNAPC4Q5SXM2 1469 aa36.49■■■■□ 3.43
ETFA-201ENST00000267950 TRIM41Q8WV44 630 aa36.47■■■■□ 3.43
ETFA-201ENST00000267950 MAGI1Q96QZ7 1491 aaPredicted RBP36.43■■■■□ 3.42
ETFA-201ENST00000267950 ERICH3Q5RHP9 1530 aa36.36■■■■□ 3.41
ETFA-201ENST00000267950 KIF27Q86VH2 1401 aa36.35■■■■□ 3.41
ETFA-201ENST00000267950 ADAMTS12P58397 1594 aa36.31■■■■□ 3.4
ETFA-201ENST00000267950 FBLN2P98095 1184 aa36.3■■■■□ 3.4
ETFA-201ENST00000267950 SYNJ2O15056 1496 aa36.27■■■■□ 3.4
ETFA-201ENST00000267950 OSCARQ8IYS5 282 aa36.24■■■■□ 3.39
ETFA-201ENST00000267950 CHIC1Q5VXU3 224 aa36.22■■■■□ 3.39
ETFA-201ENST00000267950 CHMP7Q8WUX9 453 aaPredicted RBP36.21■■■■□ 3.39
ETFA-201ENST00000267950 DNAJC5Q9H3Z4 198 aa36.21■■■■□ 3.39
ETFA-201ENST00000267950 CUL7Q14999 1698 aa36.17■■■■□ 3.38
ETFA-201ENST00000267950 FHAD1B1AJZ9 1412 aa36.17■■■■□ 3.38
ETFA-201ENST00000267950 RUSC2Q8N2Y8 1516 aa36.16■■■■□ 3.38
ETFA-201ENST00000267950 IGF1RP08069 1367 aa36.12■■■■□ 3.37
ETFA-201ENST00000267950 GRIN2AQ12879 1464 aa36.1■■■■□ 3.37
ETFA-201ENST00000267950 CLASP1Q7Z460 1538 aa35.96■■■■□ 3.35
ETFA-201ENST00000267950 CEP170Q5SW79 1584 aa35.95■■■■□ 3.35
ETFA-201ENST00000267950 CARMIL1Q5VZK9 1371 aa35.95■■■■□ 3.35
ETFA-201ENST00000267950 NUP160Q12769 1436 aa35.89■■■■□ 3.34
ETFA-201ENST00000267950 EEA1Q15075 1411 aa35.85■■■■□ 3.33
ETFA-201ENST00000267950 RAPGEF2Q9Y4G8 1499 aa35.8■■■■□ 3.32
ETFA-201ENST00000267950 RIMBP3CA6NJZ7 1639 aa35.77■■■■□ 3.32
ETFA-201ENST00000267950 RIMBP3BA6NNM3 1639 aa35.77■■■■□ 3.32
ETFA-201ENST00000267950 RIMBP3Q9UFD9 1639 aa35.77■■■■□ 3.32
ETFA-201ENST00000267950 FAM9AQ8IZU1 332 aaPredicted RBP35.76■■■■□ 3.32
ETFA-201ENST00000267950 CSRNP3Q8WYN3 585 aa35.74■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms