RNA–Protein interactions for RNA: ENST00000557975.5

ETFA-204, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 1,086 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-204ENST00000557975 AEBP2Q6ZN18 517 aaPredicted RBP28.05■■■□□ 2.08
ETFA-204ENST00000557975 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
ETFA-204ENST00000557975 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
ETFA-204ENST00000557975 PHF23Q9BUL5 403 aaPredicted RBP23.59■■□□□ 1.37
ETFA-204ENST00000557975 FOXD1Q16676 465 aa22.44■■□□□ 1.18
ETFA-204ENST00000557975 POTEDQ86YR6 584 aa21.69■■□□□ 1.06
ETFA-204ENST00000557975 MSH5O43196 834 aa21.12■□□□□ 0.97
ETFA-204ENST00000557975 PIAS4Q8N2W9 510 aaPredicted RBP20.79■□□□□ 0.92
ETFA-204ENST00000557975 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
ETFA-204ENST00000557975 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
ETFA-204ENST00000557975 ADRA2BP18089 450 aa20.47■□□□□ 0.87
ETFA-204ENST00000557975 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
ETFA-204ENST00000557975 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
ETFA-204ENST00000557975 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
ETFA-204ENST00000557975 CACNB1Q02641 598 aaPredicted RBP18.54■□□□□ 0.56
ETFA-204ENST00000557975 DCAF8L1A6NGE4 600 aa18.18■□□□□ 0.5
ETFA-204ENST00000557975 RNF39Q9H2S5 420 aa18.01■□□□□ 0.47
ETFA-204ENST00000557975 HOXD11P31277 338 aaPredicted RBP17.97■□□□□ 0.47
ETFA-204ENST00000557975 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
ETFA-204ENST00000557975 C1QBPQ07021 282 aaKnown RBP17.69■□□□□ 0.42
ETFA-204ENST00000557975 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
ETFA-204ENST00000557975 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
ETFA-204ENST00000557975 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
ETFA-204ENST00000557975 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
ETFA-204ENST00000557975 KCNA4P22459 653 aa17.28■□□□□ 0.36
ETFA-204ENST00000557975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.337e-6■□□□□ 10.8
ETFA-204ENST00000557975 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
ETFA-204ENST00000557975 POTEHQ6S545 545 aa16.86■□□□□ 0.29
ETFA-204ENST00000557975 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
ETFA-204ENST00000557975 DSG3P32926 999 aa16.7■□□□□ 0.26
ETFA-204ENST00000557975 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
ETFA-204ENST00000557975 CAPN15O75808 1086 aa16.65■□□□□ 0.26
ETFA-204ENST00000557975 SLC4A1APQ9BWU0 796 aaKnown RBP16.51■□□□□ 0.23
ETFA-204ENST00000557975 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
ETFA-204ENST00000557975 ABCB7O75027 752 aa16.25■□□□□ 0.19
ETFA-204ENST00000557975 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
ETFA-204ENST00000557975 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
ETFA-204ENST00000557975 APLP2Q06481 763 aa16.08■□□□□ 0.16
ETFA-204ENST00000557975 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
ETFA-204ENST00000557975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
ETFA-204ENST00000557975 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
ETFA-204ENST00000557975 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
ETFA-204ENST00000557975 RBM42Q9BTD8 480 aaKnown RBP15.87■□□□□ 0.13
ETFA-204ENST00000557975 MYCNP04198 464 aaPredicted RBP15.85■□□□□ 0.13
ETFA-204ENST00000557975 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
ETFA-204ENST00000557975 ZBTB22O15209 634 aa15.84■□□□□ 0.13
ETFA-204ENST00000557975 CHRDL2Q6WN34 429 aa15.8■□□□□ 0.12
ETFA-204ENST00000557975 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
ETFA-204ENST00000557975 POLA2Q14181 598 aa15.7■□□□□ 0.1
ETFA-204ENST00000557975 SP7Q8TDD2 431 aaPredicted RBP15.53■□□□□ 0.08
ETFA-204ENST00000557975 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
ETFA-204ENST00000557975 AKT1S1Q96B36 256 aa15.41■□□□□ 0.06
ETFA-204ENST00000557975 PIP4P2Q8N4L2 257 aa15.33■□□□□ 0.04
ETFA-204ENST00000557975 REM2Q8IYK8 340 aaPredicted RBP15.31■□□□□ 0.04
ETFA-204ENST00000557975 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
ETFA-204ENST00000557975 HAX1O00165 279 aa15.22■□□□□ 0.03
ETFA-204ENST00000557975 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
ETFA-204ENST00000557975 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
ETFA-204ENST00000557975 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
ETFA-204ENST00000557975 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
ETFA-204ENST00000557975 EVX2Q03828 476 aa15.05■□□□□ -0
ETFA-204ENST00000557975 FBLN2P98095 1184 aa14.84□□□□□ -0.03
ETFA-204ENST00000557975 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
ETFA-204ENST00000557975 SPDYE2BA6NHP3 402 aa14.74□□□□□ -0.05
ETFA-204ENST00000557975 SPDYE6P0CI01 402 aa14.74□□□□□ -0.05
ETFA-204ENST00000557975 SPDYE2Q495Y8 402 aa14.74□□□□□ -0.05
ETFA-204ENST00000557975 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
ETFA-204ENST00000557975 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
ETFA-204ENST00000557975 MKRN4PQ13434 485 aaPredicted RBP14.64□□□□□ -0.07
ETFA-204ENST00000557975 GABBR2O75899 941 aa14.63□□□□□ -0.07
ETFA-204ENST00000557975 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
ETFA-204ENST00000557975 LHX8Q68G74 356 aa14.58□□□□□ -0.08
ETFA-204ENST00000557975 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
ETFA-204ENST00000557975 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
ETFA-204ENST00000557975 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
ETFA-204ENST00000557975 SPDYE4A6NLX3 237 aa14.37□□□□□ -0.11
ETFA-204ENST00000557975 PRR29P0C7W0 189 aa14.35□□□□□ -0.11
ETFA-204ENST00000557975 POTEIP0CG38 1075 aa14.34□□□□□ -0.11
ETFA-204ENST00000557975 FKBP8Q14318 412 aa14.3□□□□□ -0.12
ETFA-204ENST00000557975 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
ETFA-204ENST00000557975 CD44P16070 742 aaKnown RBP14.24□□□□□ -0.13
ETFA-204ENST00000557975 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
ETFA-204ENST00000557975 PLSCR2Q9NRY7 297 aa14.14□□□□□ -0.15
ETFA-204ENST00000557975 CLCN6P51797 869 aa14.07□□□□□ -0.16
ETFA-204ENST00000557975 DCBLD2Q96PD2 775 aa14.07□□□□□ -0.16
ETFA-204ENST00000557975 PROM2Q8N271 834 aa14.04□□□□□ -0.16
ETFA-204ENST00000557975 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
ETFA-204ENST00000557975 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
ETFA-204ENST00000557975 ZRANB1Q9UGI0 708 aa13.97□□□□□ -0.17
ETFA-204ENST00000557975 GALR2O43603 387 aaPredicted RBP13.9□□□□□ -0.18
ETFA-204ENST00000557975 OTUD5Q96G74 571 aa13.9□□□□□ -0.18
ETFA-204ENST00000557975 CREBZFQ9NS37 354 aa13.88□□□□□ -0.19
ETFA-204ENST00000557975 POTEB2H3BUK9 544 aa13.87□□□□□ -0.19
ETFA-204ENST00000557975 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
ETFA-204ENST00000557975 POTEMA6NI47 508 aa13.75□□□□□ -0.21
ETFA-204ENST00000557975 PHF12Q96QT6 1004 aa13.74□□□□□ -0.21
ETFA-204ENST00000557975 PELP1Q8IZL8 1130 aaKnown RBP13.72□□□□□ -0.21
ETFA-204ENST00000557975 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
ETFA-204ENST00000557975 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
ETFA-204ENST00000557975 PAK3O75914 559 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms