RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 NISCHQ9Y2I1 1504 aa27.42■■□□□ 1.98
PFDN5-210ENST00000550513 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
PFDN5-210ENST00000550513 ABCC9O60706 1549 aa24.6■■□□□ 1.53
PFDN5-210ENST00000550513 RB1CC1Q8TDY2 1594 aa23.51■■□□□ 1.35
PFDN5-210ENST00000550513 NACADO15069 1562 aa23.31■■□□□ 1.32
PFDN5-210ENST00000550513 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
PFDN5-210ENST00000550513 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
PFDN5-210ENST00000550513 DCAF8L2P0C7V8 631 aa22.96■■□□□ 1.27
PFDN5-210ENST00000550513 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
PFDN5-210ENST00000550513 BICRAQ9NZM4 1560 aa22.8■■□□□ 1.24
PFDN5-210ENST00000550513 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
PFDN5-210ENST00000550513 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
PFDN5-210ENST00000550513 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
PFDN5-210ENST00000550513 SCRIBQ14160 1630 aa22.51■■□□□ 1.19
PFDN5-210ENST00000550513 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
PFDN5-210ENST00000550513 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
PFDN5-210ENST00000550513 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
PFDN5-210ENST00000550513 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
PFDN5-210ENST00000550513 SMARCA4P51532 1647 aa21.48■■□□□ 1.03
PFDN5-210ENST00000550513 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
PFDN5-210ENST00000550513 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
PFDN5-210ENST00000550513 HMGXB3Q12766 1538 aa21.39■■□□□ 1.02
PFDN5-210ENST00000550513 ATAD2BQ9ULI0 1458 aa21.38■■□□□ 1.01
PFDN5-210ENST00000550513 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
PFDN5-210ENST00000550513 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
PFDN5-210ENST00000550513 PEG3Q9GZU2 1588 aa21.26■□□□□ 0.99
PFDN5-210ENST00000550513 CUX2O14529 1486 aa21.24■□□□□ 0.99
PFDN5-210ENST00000550513 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
PFDN5-210ENST00000550513 NESP48681 1621 aa21.13■□□□□ 0.97
PFDN5-210ENST00000550513 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
PFDN5-210ENST00000550513 LAMC3Q9Y6N6 1575 aa21.08■□□□□ 0.97
PFDN5-210ENST00000550513 DNAJC5Q9H3Z4 198 aa21.06■□□□□ 0.96
PFDN5-210ENST00000550513 THOC2Q8NI27 1593 aaKnown RBP21.06■□□□□ 0.96
PFDN5-210ENST00000550513 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
PFDN5-210ENST00000550513 WIZO95785 1651 aa20.96■□□□□ 0.95
PFDN5-210ENST00000550513 PDS5BQ9NTI5 1447 aa20.84■□□□□ 0.93
PFDN5-210ENST00000550513 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
PFDN5-210ENST00000550513 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
PFDN5-210ENST00000550513 WDR62O43379 1518 aa20.71■□□□□ 0.91
PFDN5-210ENST00000550513 PRDM2Q13029 1718 aa20.68■□□□□ 0.9
PFDN5-210ENST00000550513 TOP2AP11388 1531 aaKnown RBP20.67■□□□□ 0.9
PFDN5-210ENST00000550513 CEP164Q9UPV0 1460 aa20.65■□□□□ 0.9
PFDN5-210ENST00000550513 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
PFDN5-210ENST00000550513 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
PFDN5-210ENST00000550513 CFTRP13569 1480 aa20.56■□□□□ 0.88
PFDN5-210ENST00000550513 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
PFDN5-210ENST00000550513 CCDC88BA6NC98 1476 aa20.33■□□□□ 0.85
PFDN5-210ENST00000550513 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
PFDN5-210ENST00000550513 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
PFDN5-210ENST00000550513 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
PFDN5-210ENST00000550513 EIF4G3O43432 1585 aaKnown RBP20.18■□□□□ 0.82
PFDN5-210ENST00000550513 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
PFDN5-210ENST00000550513 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
PFDN5-210ENST00000550513 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
PFDN5-210ENST00000550513 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
PFDN5-210ENST00000550513 CHD1O14646 1710 aa20.1■□□□□ 0.81
PFDN5-210ENST00000550513 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
PFDN5-210ENST00000550513 RIMBP3CA6NJZ7 1639 aa20.07■□□□□ 0.8
PFDN5-210ENST00000550513 RIMBP3BA6NNM3 1639 aa20.07■□□□□ 0.8
PFDN5-210ENST00000550513 RIMBP3Q9UFD9 1639 aa20.07■□□□□ 0.8
PFDN5-210ENST00000550513 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
PFDN5-210ENST00000550513 ARHGEF11O15085 1522 aa19.95■□□□□ 0.78
PFDN5-210ENST00000550513 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
PFDN5-210ENST00000550513 AQRO60306 1485 aaKnown RBP eCLIP19.92■□□□□ 0.786e-7■■■■■ 36.8
PFDN5-210ENST00000550513 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
PFDN5-210ENST00000550513 RAD54L2Q9Y4B4 1467 aa19.88■□□□□ 0.77
PFDN5-210ENST00000550513 CUX1P39880 1505 aa19.87■□□□□ 0.77
PFDN5-210ENST00000550513 PBRM1Q86U86 1689 aa19.86■□□□□ 0.77
PFDN5-210ENST00000550513 SOGA1O94964 1423 aa19.83■□□□□ 0.76
PFDN5-210ENST00000550513 SNAPC4Q5SXM2 1469 aa19.8■□□□□ 0.76
PFDN5-210ENST00000550513 TDRD9Q8NDG6 1382 aaKnown RBP19.77■□□□□ 0.76
PFDN5-210ENST00000550513 MAGI1Q96QZ7 1491 aaPredicted RBP19.75■□□□□ 0.75
PFDN5-210ENST00000550513 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
PFDN5-210ENST00000550513 SYNJ1O43426 1573 aa19.74■□□□□ 0.75
PFDN5-210ENST00000550513 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
PFDN5-210ENST00000550513 FBLN2P98095 1184 aa19.73■□□□□ 0.75
PFDN5-210ENST00000550513 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
PFDN5-210ENST00000550513 GRIN2BQ13224 1484 aa19.72■□□□□ 0.75
PFDN5-210ENST00000550513 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
PFDN5-210ENST00000550513 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
PFDN5-210ENST00000550513 GAPVD1Q14C86 1478 aa19.65■□□□□ 0.74
PFDN5-210ENST00000550513 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
PFDN5-210ENST00000550513 CYB5RLQ6IPT4 315 aa19.63■□□□□ 0.73
PFDN5-210ENST00000550513 SUPT5HO00267 1087 aaKnown RBP19.61■□□□□ 0.73
PFDN5-210ENST00000550513 TOP2BQ02880 1626 aa19.61■□□□□ 0.73
PFDN5-210ENST00000550513 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
PFDN5-210ENST00000550513 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
PFDN5-210ENST00000550513 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
PFDN5-210ENST00000550513 GRIN2AQ12879 1464 aa19.49■□□□□ 0.71
PFDN5-210ENST00000550513 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
PFDN5-210ENST00000550513 TRHP20396 242 aaPredicted RBP19.44■□□□□ 0.7
PFDN5-210ENST00000550513 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
PFDN5-210ENST00000550513 SHROOM2Q13796 1616 aa19.43■□□□□ 0.7
PFDN5-210ENST00000550513 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
PFDN5-210ENST00000550513 NUP160Q12769 1436 aa19.4■□□□□ 0.7
PFDN5-210ENST00000550513 FHAD1B1AJZ9 1412 aa19.37■□□□□ 0.69
PFDN5-210ENST00000550513 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
PFDN5-210ENST00000550513 CUL7Q14999 1698 aa19.25■□□□□ 0.67
PFDN5-210ENST00000550513 KIF13AQ9H1H9 1805 aa19.24■□□□□ 0.67
PFDN5-210ENST00000550513 PRG4Q92954 1404 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms