Protein–RNA interactions for Protein: Q9Y6F1

PARP3, Poly [ADP-ribose] polymerase 3, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP3Q9Y6F1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.5■■■□□ 2.63
PARP3Q9Y6F1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.49■■■□□ 2.63
PARP3Q9Y6F1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PARP3Q9Y6F1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PARP3Q9Y6F1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PARP3Q9Y6F1 AP004833.2-201ENST00000532228 1454 ntBASIC31.48■■■□□ 2.63
PARP3Q9Y6F1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.48■■■□□ 2.63
PARP3Q9Y6F1 MIR4508-201ENST00000584178 70 ntBASIC31.48■■■□□ 2.63
PARP3Q9Y6F1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PARP3Q9Y6F1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PARP3Q9Y6F1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PARP3Q9Y6F1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.47■■■□□ 2.63
PARP3Q9Y6F1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PARP3Q9Y6F1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
PARP3Q9Y6F1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
PARP3Q9Y6F1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PARP3Q9Y6F1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.45■■■□□ 2.63
PARP3Q9Y6F1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.45■■■□□ 2.63
PARP3Q9Y6F1 AC100797.4-201ENST00000631653 1827 ntBASIC31.45■■■□□ 2.62
PARP3Q9Y6F1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.44■■■□□ 2.62
PARP3Q9Y6F1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PARP3Q9Y6F1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.44■■■□□ 2.62
PARP3Q9Y6F1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PARP3Q9Y6F1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PARP3Q9Y6F1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
PARP3Q9Y6F1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.43■■■□□ 2.62
PARP3Q9Y6F1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.43■■■□□ 2.62
PARP3Q9Y6F1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PARP3Q9Y6F1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.43■■■□□ 2.62
PARP3Q9Y6F1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.43■■■□□ 2.62
PARP3Q9Y6F1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
PARP3Q9Y6F1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
PARP3Q9Y6F1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PARP3Q9Y6F1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PARP3Q9Y6F1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PARP3Q9Y6F1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
PARP3Q9Y6F1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.41■■■□□ 2.62
PARP3Q9Y6F1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.4■■■□□ 2.62
PARP3Q9Y6F1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.4■■■□□ 2.62
PARP3Q9Y6F1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.39■■■□□ 2.62
PARP3Q9Y6F1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.39■■■□□ 2.61
PARP3Q9Y6F1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
PARP3Q9Y6F1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
PARP3Q9Y6F1 AL356441.2-201ENST00000443009 864 ntBASIC31.38■■■□□ 2.61
PARP3Q9Y6F1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.38■■■□□ 2.61
PARP3Q9Y6F1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
PARP3Q9Y6F1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PARP3Q9Y6F1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
PARP3Q9Y6F1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
PARP3Q9Y6F1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
PARP3Q9Y6F1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PARP3Q9Y6F1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PARP3Q9Y6F1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.36■■■□□ 2.61
PARP3Q9Y6F1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PARP3Q9Y6F1 AC103724.3-201ENST00000564481 992 ntBASIC31.36■■■□□ 2.61
PARP3Q9Y6F1 AL031848.2-201ENST00000607670 837 ntBASIC31.36■■■□□ 2.61
PARP3Q9Y6F1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.35■■■□□ 2.61
PARP3Q9Y6F1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.35■■■□□ 2.61
PARP3Q9Y6F1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PARP3Q9Y6F1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.35■■■□□ 2.61
PARP3Q9Y6F1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PARP3Q9Y6F1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
PARP3Q9Y6F1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.34■■■□□ 2.61
PARP3Q9Y6F1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.34■■■□□ 2.61
PARP3Q9Y6F1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
PARP3Q9Y6F1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.33■■■□□ 2.61
PARP3Q9Y6F1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PARP3Q9Y6F1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.33■■■□□ 2.61
PARP3Q9Y6F1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
PARP3Q9Y6F1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PARP3Q9Y6F1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PARP3Q9Y6F1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PARP3Q9Y6F1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PARP3Q9Y6F1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.31■■■□□ 2.6
PARP3Q9Y6F1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
PARP3Q9Y6F1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
PARP3Q9Y6F1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
PARP3Q9Y6F1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.29■■■□□ 2.6
PARP3Q9Y6F1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
PARP3Q9Y6F1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
PARP3Q9Y6F1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.29■■■□□ 2.6
PARP3Q9Y6F1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
PARP3Q9Y6F1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
PARP3Q9Y6F1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PARP3Q9Y6F1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PARP3Q9Y6F1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PARP3Q9Y6F1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
PARP3Q9Y6F1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.28■■■□□ 2.6
PARP3Q9Y6F1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PARP3Q9Y6F1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
PARP3Q9Y6F1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
PARP3Q9Y6F1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
PARP3Q9Y6F1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
PARP3Q9Y6F1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.26■■■□□ 2.59
PARP3Q9Y6F1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
PARP3Q9Y6F1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.25■■■□□ 2.59
PARP3Q9Y6F1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
PARP3Q9Y6F1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
PARP3Q9Y6F1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PARP3Q9Y6F1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms