Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DYNC2LI1Q8TCX1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DYNC2LI1Q8TCX1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DYNC2LI1Q8TCX1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.97■■□□□ 1.11
DYNC2LI1Q8TCX1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DYNC2LI1Q8TCX1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
DYNC2LI1Q8TCX1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DYNC2LI1Q8TCX1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.97■■□□□ 1.11
DYNC2LI1Q8TCX1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.97■■□□□ 1.11
DYNC2LI1Q8TCX1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DYNC2LI1Q8TCX1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DYNC2LI1Q8TCX1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
DYNC2LI1Q8TCX1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
DYNC2LI1Q8TCX1 AL031258.1-201ENST00000623562 325 ntBASIC21.96■■□□□ 1.11
DYNC2LI1Q8TCX1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
DYNC2LI1Q8TCX1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DYNC2LI1Q8TCX1 AP004609.3-201ENST00000610705 1884 ntBASIC21.96■■□□□ 1.11
DYNC2LI1Q8TCX1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.95■■□□□ 1.1
DYNC2LI1Q8TCX1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
DYNC2LI1Q8TCX1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DYNC2LI1Q8TCX1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
DYNC2LI1Q8TCX1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.95■■□□□ 1.1
DYNC2LI1Q8TCX1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DYNC2LI1Q8TCX1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DYNC2LI1Q8TCX1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DYNC2LI1Q8TCX1 LINC00543-201ENST00000567234 1845 ntBASIC21.94■■□□□ 1.1
DYNC2LI1Q8TCX1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.93■■□□□ 1.1
DYNC2LI1Q8TCX1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DYNC2LI1Q8TCX1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.92■■□□□ 1.1
DYNC2LI1Q8TCX1 AC068473.5-201ENST00000616428 2072 ntBASIC21.92■■□□□ 1.1
DYNC2LI1Q8TCX1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.91■■□□□ 1.1
DYNC2LI1Q8TCX1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DYNC2LI1Q8TCX1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.91■■□□□ 1.1
DYNC2LI1Q8TCX1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DYNC2LI1Q8TCX1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DYNC2LI1Q8TCX1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DYNC2LI1Q8TCX1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 AC138932.3-201ENST00000567634 1902 ntBASIC21.9■■□□□ 1.1
DYNC2LI1Q8TCX1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
DYNC2LI1Q8TCX1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
DYNC2LI1Q8TCX1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DYNC2LI1Q8TCX1 AC079834.2-201ENST00000609776 1949 ntBASIC21.89■■□□□ 1.09
DYNC2LI1Q8TCX1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.89■■□□□ 1.09
DYNC2LI1Q8TCX1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DYNC2LI1Q8TCX1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
DYNC2LI1Q8TCX1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.88■■□□□ 1.09
DYNC2LI1Q8TCX1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
DYNC2LI1Q8TCX1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DYNC2LI1Q8TCX1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.87■■□□□ 1.09
DYNC2LI1Q8TCX1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
DYNC2LI1Q8TCX1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DYNC2LI1Q8TCX1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DYNC2LI1Q8TCX1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.87■■□□□ 1.09
DYNC2LI1Q8TCX1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DYNC2LI1Q8TCX1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DYNC2LI1Q8TCX1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DYNC2LI1Q8TCX1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DYNC2LI1Q8TCX1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DYNC2LI1Q8TCX1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DYNC2LI1Q8TCX1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DYNC2LI1Q8TCX1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
DYNC2LI1Q8TCX1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DYNC2LI1Q8TCX1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DYNC2LI1Q8TCX1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DYNC2LI1Q8TCX1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
DYNC2LI1Q8TCX1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.84■■□□□ 1.09
DYNC2LI1Q8TCX1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DYNC2LI1Q8TCX1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
DYNC2LI1Q8TCX1 AC022211.4-201ENST00000625094 2161 ntBASIC21.84■■□□□ 1.09
DYNC2LI1Q8TCX1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
DYNC2LI1Q8TCX1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
DYNC2LI1Q8TCX1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.82■■□□□ 1.08
DYNC2LI1Q8TCX1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DYNC2LI1Q8TCX1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DYNC2LI1Q8TCX1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
DYNC2LI1Q8TCX1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.82■■□□□ 1.08
DYNC2LI1Q8TCX1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
DYNC2LI1Q8TCX1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DYNC2LI1Q8TCX1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DYNC2LI1Q8TCX1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.81■■□□□ 1.08
DYNC2LI1Q8TCX1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DYNC2LI1Q8TCX1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DYNC2LI1Q8TCX1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.8■■□□□ 1.08
DYNC2LI1Q8TCX1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DYNC2LI1Q8TCX1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DYNC2LI1Q8TCX1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DYNC2LI1Q8TCX1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DYNC2LI1Q8TCX1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DYNC2LI1Q8TCX1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.8■■□□□ 1.08
DYNC2LI1Q8TCX1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DYNC2LI1Q8TCX1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms