Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
SEC61A1P61619 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEC61A1P61619 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.41■■□□□ 1.02
SEC61A1P61619 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEC61A1P61619 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
SEC61A1P61619 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SEC61A1P61619 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SEC61A1P61619 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.39■■□□□ 1.01
SEC61A1P61619 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SEC61A1P61619 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SEC61A1P61619 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.38■■□□□ 1.01
SEC61A1P61619 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SEC61A1P61619 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.38■■□□□ 1.01
SEC61A1P61619 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SEC61A1P61619 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
SEC61A1P61619 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SEC61A1P61619 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SEC61A1P61619 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SEC61A1P61619 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SEC61A1P61619 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SEC61A1P61619 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SEC61A1P61619 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SEC61A1P61619 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SEC61A1P61619 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SEC61A1P61619 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.36■■□□□ 1.01
SEC61A1P61619 AC093323.1-202ENST00000635031 2045 ntBASIC21.36■■□□□ 1.01
SEC61A1P61619 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SEC61A1P61619 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SEC61A1P61619 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.36■■□□□ 1.01
SEC61A1P61619 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SEC61A1P61619 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SEC61A1P61619 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SEC61A1P61619 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.35■■□□□ 1.01
SEC61A1P61619 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SEC61A1P61619 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.35■■□□□ 1.01
SEC61A1P61619 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SEC61A1P61619 AC020928.2-201ENST00000588717 2197 ntBASIC21.34■■□□□ 1.01
SEC61A1P61619 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEC61A1P61619 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SEC61A1P61619 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEC61A1P61619 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEC61A1P61619 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
SEC61A1P61619 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SEC61A1P61619 AC091060.1-201ENST00000623524 1766 ntBASIC21.32■■□□□ 1
SEC61A1P61619 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.31■■□□□ 1
SEC61A1P61619 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SEC61A1P61619 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.31■■□□□ 1
SEC61A1P61619 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SEC61A1P61619 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.31■■□□□ 1
SEC61A1P61619 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SEC61A1P61619 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.31■■□□□ 1
SEC61A1P61619 AC100797.4-201ENST00000631653 1827 ntBASIC21.3■■□□□ 1
SEC61A1P61619 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.3■■□□□ 1
SEC61A1P61619 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.3■■□□□ 1
SEC61A1P61619 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.29■■□□□ 1
SEC61A1P61619 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEC61A1P61619 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SEC61A1P61619 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.29■■□□□ 1
SEC61A1P61619 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SEC61A1P61619 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.29■■□□□ 1
SEC61A1P61619 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
SEC61A1P61619 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEC61A1P61619 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.29■■□□□ 1
SEC61A1P61619 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SEC61A1P61619 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SEC61A1P61619 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.28■■□□□ 1
SEC61A1P61619 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SEC61A1P61619 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.28■■□□□ 1
SEC61A1P61619 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.28■■□□□ 1
SEC61A1P61619 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.28■■□□□ 1
SEC61A1P61619 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SEC61A1P61619 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.28■■□□□ 1
SEC61A1P61619 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.27■■□□□ 1
SEC61A1P61619 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEC61A1P61619 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEC61A1P61619 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SEC61A1P61619 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.27■■□□□ 1
SEC61A1P61619 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.27■■□□□ 1
SEC61A1P61619 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.27■■□□□ 1
SEC61A1P61619 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEC61A1P61619 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEC61A1P61619 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEC61A1P61619 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEC61A1P61619 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEC61A1P61619 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SEC61A1P61619 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
SEC61A1P61619 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEC61A1P61619 AC110285.7-201ENST00000624417 1536 ntBASIC21.25■□□□□ 0.99
SEC61A1P61619 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEC61A1P61619 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.25■□□□□ 0.99
SEC61A1P61619 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEC61A1P61619 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEC61A1P61619 LINC01003-201ENST00000564834 1764 ntBASIC21.25■□□□□ 0.99
SEC61A1P61619 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SEC61A1P61619 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEC61A1P61619 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.24■□□□□ 0.99
SEC61A1P61619 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEC61A1P61619 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SEC61A1P61619 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SEC61A1P61619 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms