Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SVIPQ8NHG7 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SVIPQ8NHG7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
SVIPQ8NHG7 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SVIPQ8NHG7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SVIPQ8NHG7 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.31□□□□□ -0.6
SVIPQ8NHG7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
SVIPQ8NHG7 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.3□□□□□ -0.6
SVIPQ8NHG7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 C1orf220-202ENST00000521244 2577 ntTSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 HIST1H2BE-202ENST00000634910 2585 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 TTI2-201ENST00000360742 2242 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms