RNA–Protein interactions for RNA: ENST00000286758.4

CXCL13-201, Transcript of C-X-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL13, Length 1,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-201ENST00000286758 AEBP2Q6ZN18 517 aaPredicted RBP30.54■■■□□ 2.48
CXCL13-201ENST00000286758 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
CXCL13-201ENST00000286758 SENP3Q9H4L4 574 aaPredicted RBP26.25■■□□□ 1.79
CXCL13-201ENST00000286758 PHF23Q9BUL5 403 aaPredicted RBP25.81■■□□□ 1.72
CXCL13-201ENST00000286758 FOXD1Q16676 465 aa24.43■■□□□ 1.5
CXCL13-201ENST00000286758 MSH5O43196 834 aa23.11■■□□□ 1.29
CXCL13-201ENST00000286758 POTEDQ86YR6 584 aa23.09■■□□□ 1.29
CXCL13-201ENST00000286758 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
CXCL13-201ENST00000286758 PIAS4Q8N2W9 510 aaPredicted RBP22.82■■□□□ 1.24
CXCL13-201ENST00000286758 PPP6R1Q9UPN7 881 aa22.51■■□□□ 1.19
CXCL13-201ENST00000286758 ADRA2BP18089 450 aa22.46■■□□□ 1.19
CXCL13-201ENST00000286758 MAPK8IP2Q13387 824 aaPredicted RBP20.72■□□□□ 0.91
CXCL13-201ENST00000286758 DMRT2Q9Y5R5 561 aa20.71■□□□□ 0.91
CXCL13-201ENST00000286758 SCAF1Q9H7N4 1312 aaKnown RBP20.71■□□□□ 0.91
CXCL13-201ENST00000286758 CACNB1Q02641 598 aaPredicted RBP20.07■□□□□ 0.8
CXCL13-201ENST00000286758 DCAF8L1A6NGE4 600 aa20■□□□□ 0.79
CXCL13-201ENST00000286758 PPP4R3CPQ6ZMV5 832 aa19.94■□□□□ 0.78
CXCL13-201ENST00000286758 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
CXCL13-201ENST00000286758 MYT1Q01538 1121 aa19.82■□□□□ 0.76
CXCL13-201ENST00000286758 HOXD11P31277 338 aaPredicted RBP19.79■□□□□ 0.76
CXCL13-201ENST00000286758 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
CXCL13-201ENST00000286758 RNF39Q9H2S5 420 aa19.61■□□□□ 0.73
CXCL13-201ENST00000286758 RNF216Q9NWF9 866 aaPredicted RBP19.58■□□□□ 0.72
CXCL13-201ENST00000286758 C1QBPQ07021 282 aaKnown RBP19.36■□□□□ 0.69
CXCL13-201ENST00000286758 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
CXCL13-201ENST00000286758 NCBP3Q53F19 620 aaKnown RBP19.16■□□□□ 0.66
CXCL13-201ENST00000286758 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
CXCL13-201ENST00000286758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.96■□□□□ 0.63
CXCL13-201ENST00000286758 DNAJC5Q9H3Z4 198 aa18.84■□□□□ 0.61
CXCL13-201ENST00000286758 NPM3O75607 178 aaKnown RBP18.77■□□□□ 0.6
CXCL13-201ENST00000286758 U3KPZ7 1027 aaPredicted RBP18.41■□□□□ 0.54
CXCL13-201ENST00000286758 CAPN15O75808 1086 aa18.35■□□□□ 0.53
CXCL13-201ENST00000286758 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
CXCL13-201ENST00000286758 DSG3P32926 999 aa18.24■□□□□ 0.51
CXCL13-201ENST00000286758 HRCP23327 699 aa18.16■□□□□ 0.5
CXCL13-201ENST00000286758 KCNA4P22459 653 aa18.07■□□□□ 0.48
CXCL13-201ENST00000286758 POTEHQ6S545 545 aa18.07■□□□□ 0.48
CXCL13-201ENST00000286758 APLP2Q06481 763 aa18.05■□□□□ 0.48
CXCL13-201ENST00000286758 SLC4A2P04920 1241 aa17.97■□□□□ 0.47
CXCL13-201ENST00000286758 TRHP20396 242 aaPredicted RBP17.95■□□□□ 0.46
CXCL13-201ENST00000286758 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
CXCL13-201ENST00000286758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.91■□□□□ 0.46
CXCL13-201ENST00000286758 HNRNPUL2Q1KMD3 747 aaKnown RBP17.91■□□□□ 0.46
CXCL13-201ENST00000286758 ERICH6Q7L0X2 663 aa17.89■□□□□ 0.45
CXCL13-201ENST00000286758 ABCB7O75027 752 aa17.85■□□□□ 0.45
CXCL13-201ENST00000286758 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
CXCL13-201ENST00000286758 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
CXCL13-201ENST00000286758 PRKCSHP14314 528 aaPredicted RBP17.49■□□□□ 0.39
CXCL13-201ENST00000286758 MYCNP04198 464 aaPredicted RBP17.44■□□□□ 0.38
CXCL13-201ENST00000286758 POLA2Q14181 598 aa17.36■□□□□ 0.37
CXCL13-201ENST00000286758 CENPBP07199 599 aaPredicted RBP17.31■□□□□ 0.36
CXCL13-201ENST00000286758 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
CXCL13-201ENST00000286758 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
CXCL13-201ENST00000286758 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
CXCL13-201ENST00000286758 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
CXCL13-201ENST00000286758 ZBTB12Q9Y330 459 aaPredicted RBP17.06■□□□□ 0.32
CXCL13-201ENST00000286758 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
CXCL13-201ENST00000286758 ABCC9O60706 1549 aa17.05■□□□□ 0.32
CXCL13-201ENST00000286758 FOXD4L1Q9NU39 408 aa17.04■□□□□ 0.32
CXCL13-201ENST00000286758 ACIN1Q9UKV3 1341 aaKnown RBP17.02■□□□□ 0.32
CXCL13-201ENST00000286758 AKT1S1Q96B36 256 aa17■□□□□ 0.31
CXCL13-201ENST00000286758 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
CXCL13-201ENST00000286758 ATF5Q9Y2D1 282 aaPredicted RBP16.95■□□□□ 0.3
CXCL13-201ENST00000286758 NISCHQ9Y2I1 1504 aa16.93■□□□□ 0.3
CXCL13-201ENST00000286758 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
CXCL13-201ENST00000286758 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
CXCL13-201ENST00000286758 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
CXCL13-201ENST00000286758 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
CXCL13-201ENST00000286758 DAXXQ9UER7 740 aaPredicted RBP16.85■□□□□ 0.29
CXCL13-201ENST00000286758 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
CXCL13-201ENST00000286758 REM2Q8IYK8 340 aaPredicted RBP16.8■□□□□ 0.28
CXCL13-201ENST00000286758 PCGF6Q9BYE7 350 aa16.79■□□□□ 0.28
CXCL13-201ENST00000286758 SP7Q8TDD2 431 aaPredicted RBP16.77■□□□□ 0.28
CXCL13-201ENST00000286758 ANP32EQ9BTT0 268 aa16.77■□□□□ 0.28
CXCL13-201ENST00000286758 ILDR1Q86SU0 546 aaPredicted RBP16.72■□□□□ 0.27
CXCL13-201ENST00000286758 PIP4P2Q8N4L2 257 aa16.7■□□□□ 0.26
CXCL13-201ENST00000286758 GTF3C3Q9Y5Q9 886 aa16.67■□□□□ 0.26
CXCL13-201ENST00000286758 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
CXCL13-201ENST00000286758 PITPNM1O00562 1244 aa16.62■□□□□ 0.25
CXCL13-201ENST00000286758 HAX1O00165 279 aa16.58■□□□□ 0.24
CXCL13-201ENST00000286758 NEUROD1Q13562 356 aa16.57■□□□□ 0.24
CXCL13-201ENST00000286758 ATXN8OSP0DMR3 200 aa16.56■□□□□ 0.24
CXCL13-201ENST00000286758 ZBTB22O15209 634 aa16.55■□□□□ 0.24
CXCL13-201ENST00000286758 FXR2P51116 673 aaKnown RBP eCLIP16.53■□□□□ 0.24
CXCL13-201ENST00000286758 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
CXCL13-201ENST00000286758 FBLN2P98095 1184 aa16.48■□□□□ 0.23
CXCL13-201ENST00000286758 MYT1LQ9UL68 1186 aa16.47■□□□□ 0.23
CXCL13-201ENST00000286758 MYO15BQ96JP2 1530 aa16.46■□□□□ 0.23
CXCL13-201ENST00000286758 SPDYE2BA6NHP3 402 aa16.45■□□□□ 0.22
CXCL13-201ENST00000286758 SPDYE6P0CI01 402 aa16.45■□□□□ 0.22
CXCL13-201ENST00000286758 SPDYE2Q495Y8 402 aa16.45■□□□□ 0.22
CXCL13-201ENST00000286758 EIF5BO60841 1220 aaKnown RBP16.41■□□□□ 0.22
CXCL13-201ENST00000286758 UBE2Q2Q8WVN8 375 aa16.32■□□□□ 0.2
CXCL13-201ENST00000286758 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
CXCL13-201ENST00000286758 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
CXCL13-201ENST00000286758 ERICH6BQ5W0A0 696 aa16.27■□□□□ 0.2
CXCL13-201ENST00000286758 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
CXCL13-201ENST00000286758 PRKAR2AP13861 404 aaKnown RBP16.23■□□□□ 0.19
CXCL13-201ENST00000286758 ZNF692Q9BU19 519 aaPredicted RBP16.21■□□□□ 0.19
CXCL13-201ENST00000286758 EVX2Q03828 476 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms