RNA–Protein interactions for RNA: ENST00000521244.1

C1orf220-202, Transcript of chromosome 1 open reading frame 220 (putative), humanhuman

TSL 2 BASIC

Gene C1orf220, Length 2,577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf220-202ENST00000521244 NISCHQ9Y2I1 1504 aa21.41■■□□□ 1.02
C1orf220-202ENST00000521244 PELP1Q8IZL8 1130 aaKnown RBP19.31■□□□□ 0.68
C1orf220-202ENST00000521244 MYT1Q01538 1121 aa19.14■□□□□ 0.65
C1orf220-202ENST00000521244 CCDC180Q9P1Z9 1646 aa18.86■□□□□ 0.61
C1orf220-202ENST00000521244 TTBK1Q5TCY1 1321 aaPredicted RBP18.54■□□□□ 0.56
C1orf220-202ENST00000521244 ABCC9O60706 1549 aa18.3■□□□□ 0.52
C1orf220-202ENST00000521244 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
C1orf220-202ENST00000521244 ZCCHC6Q5VYS8 1495 aaKnown RBP17.87■□□□□ 0.45
C1orf220-202ENST00000521244 PRKCSHP14314 528 aaPredicted RBP17.85■□□□□ 0.45
C1orf220-202ENST00000521244 NACADO15069 1562 aa17.72■□□□□ 0.43
C1orf220-202ENST00000521244 DCAF1Q9Y4B6 1507 aa17.71■□□□□ 0.43
C1orf220-202ENST00000521244 MYO15BQ96JP2 1530 aa17.7■□□□□ 0.42
C1orf220-202ENST00000521244 SLC24A1O60721 1099 aa17.7■□□□□ 0.42
C1orf220-202ENST00000521244 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
C1orf220-202ENST00000521244 ERICH6Q7L0X2 663 aa17.65■□□□□ 0.42
C1orf220-202ENST00000521244 APLP2Q06481 763 aa17.62■□□□□ 0.41
C1orf220-202ENST00000521244 HRCP23327 699 aa17.42■□□□□ 0.38
C1orf220-202ENST00000521244 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
C1orf220-202ENST00000521244 BCL11AQ9H165 835 aa17.27■□□□□ 0.36
C1orf220-202ENST00000521244 UNC13AQ9UPW8 1703 aa17.2■□□□□ 0.34
C1orf220-202ENST00000521244 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
C1orf220-202ENST00000521244 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
C1orf220-202ENST00000521244 BICRAQ9NZM4 1560 aa17.12■□□□□ 0.33
C1orf220-202ENST00000521244 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
C1orf220-202ENST00000521244 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
C1orf220-202ENST00000521244 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
C1orf220-202ENST00000521244 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
C1orf220-202ENST00000521244 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
C1orf220-202ENST00000521244 EIF4G1Q04637 1599 aaKnown RBP16.66■□□□□ 0.26
C1orf220-202ENST00000521244 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
C1orf220-202ENST00000521244 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
C1orf220-202ENST00000521244 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
C1orf220-202ENST00000521244 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
C1orf220-202ENST00000521244 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
C1orf220-202ENST00000521244 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
C1orf220-202ENST00000521244 EIF5BO60841 1220 aaKnown RBP16.5■□□□□ 0.23
C1orf220-202ENST00000521244 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
C1orf220-202ENST00000521244 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
C1orf220-202ENST00000521244 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
C1orf220-202ENST00000521244 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
C1orf220-202ENST00000521244 NCAPD3P42695 1498 aa16.38■□□□□ 0.21
C1orf220-202ENST00000521244 PEG3Q9GZU2 1588 aa16.37■□□□□ 0.21
C1orf220-202ENST00000521244 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
C1orf220-202ENST00000521244 WIZO95785 1651 aa16.32■□□□□ 0.2
C1orf220-202ENST00000521244 BAZ1BQ9UIG0 1483 aaKnown RBP16.3■□□□□ 0.2
C1orf220-202ENST00000521244 SUPT5HO00267 1087 aaKnown RBP16.29■□□□□ 0.2
C1orf220-202ENST00000521244 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
C1orf220-202ENST00000521244 GTF3C3Q9Y5Q9 886 aa16.2■□□□□ 0.18
C1orf220-202ENST00000521244 UBE2Q2Q8WVN8 375 aa16.18■□□□□ 0.18
C1orf220-202ENST00000521244 TOP2AP11388 1531 aaKnown RBP16.17■□□□□ 0.18
C1orf220-202ENST00000521244 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
C1orf220-202ENST00000521244 ZEB1P37275 1124 aaPredicted RBP16.11■□□□□ 0.17
C1orf220-202ENST00000521244 PCGF6Q9BYE7 350 aa16.07■□□□□ 0.16
C1orf220-202ENST00000521244 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
C1orf220-202ENST00000521244 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
C1orf220-202ENST00000521244 CCDC88BA6NC98 1476 aa16.01■□□□□ 0.15
C1orf220-202ENST00000521244 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
C1orf220-202ENST00000521244 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
C1orf220-202ENST00000521244 NESP48681 1621 aa15.9■□□□□ 0.14
C1orf220-202ENST00000521244 ANO8Q9HCE9 1232 aaPredicted RBP15.88■□□□□ 0.13
C1orf220-202ENST00000521244 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
C1orf220-202ENST00000521244 CFTRP13569 1480 aa15.87■□□□□ 0.13
C1orf220-202ENST00000521244 PODXL2Q9NZ53 605 aa15.84■□□□□ 0.13
C1orf220-202ENST00000521244 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
C1orf220-202ENST00000521244 ERCC6Q03468 1493 aa15.76■□□□□ 0.11
C1orf220-202ENST00000521244 PKNOX2Q96KN3 472 aa15.75■□□□□ 0.11
C1orf220-202ENST00000521244 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
C1orf220-202ENST00000521244 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
C1orf220-202ENST00000521244 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
C1orf220-202ENST00000521244 PRDM2Q13029 1718 aa15.66■□□□□ 0.1
C1orf220-202ENST00000521244 KIF21AQ7Z4S6 1674 aa15.66■□□□□ 0.1
C1orf220-202ENST00000521244 ERICH6BQ5W0A0 696 aa15.65■□□□□ 0.1
C1orf220-202ENST00000521244 MRC2Q9UBG0 1479 aa15.6■□□□□ 0.09
C1orf220-202ENST00000521244 TRIM26Q12899 539 aaPredicted RBP15.58■□□□□ 0.09
C1orf220-202ENST00000521244 THOC2Q8NI27 1593 aaKnown RBP15.55■□□□□ 0.08
C1orf220-202ENST00000521244 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
C1orf220-202ENST00000521244 MYT1LQ9UL68 1186 aa15.54■□□□□ 0.08
C1orf220-202ENST00000521244 ABCC8Q09428 1581 aa15.52■□□□□ 0.08
C1orf220-202ENST00000521244 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
C1orf220-202ENST00000521244 WDR62O43379 1518 aa15.52■□□□□ 0.08
C1orf220-202ENST00000521244 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.07
C1orf220-202ENST00000521244 ARXQ96QS3 562 aa15.51■□□□□ 0.07
C1orf220-202ENST00000521244 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
C1orf220-202ENST00000521244 CLSPNQ9HAW4 1339 aa15.49■□□□□ 0.07
C1orf220-202ENST00000521244 WRNQ14191 1432 aaPredicted RBP eCLIP15.49■□□□□ 0.07
C1orf220-202ENST00000521244 TSHZ2Q9NRE2 1034 aa15.49■□□□□ 0.07
C1orf220-202ENST00000521244 CUX2O14529 1486 aa15.48■□□□□ 0.07
C1orf220-202ENST00000521244 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
C1orf220-202ENST00000521244 CUX1P39880 1505 aa15.47■□□□□ 0.07
C1orf220-202ENST00000521244 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
C1orf220-202ENST00000521244 NEFLP07196 543 aa15.43■□□□□ 0.06
C1orf220-202ENST00000521244 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
C1orf220-202ENST00000521244 TOP2BQ02880 1626 aa15.38■□□□□ 0.05
C1orf220-202ENST00000521244 POLA1P09884 1462 aaPredicted RBP15.38■□□□□ 0.05
C1orf220-202ENST00000521244 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
C1orf220-202ENST00000521244 CCDC136Q96JN2 1154 aa15.36■□□□□ 0.05
C1orf220-202ENST00000521244 SOGA1O94964 1423 aa15.36■□□□□ 0.05
C1orf220-202ENST00000521244 BIVM-ERCC5R4GMW8 1640 aa15.36■□□□□ 0.05
C1orf220-202ENST00000521244 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
C1orf220-202ENST00000521244 IFT140Q96RY7 1462 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms