RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 NISCHQ9Y2I1 1504 aa25.76■■□□□ 1.71
ZNF541-203ENST00000391901 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
ZNF541-203ENST00000391901 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
ZNF541-203ENST00000391901 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
ZNF541-203ENST00000391901 EHMT2Q96KQ7 1210 aa23.48■■□□□ 1.35
ZNF541-203ENST00000391901 FAM9AQ8IZU1 332 aaPredicted RBP23.07■■□□□ 1.28
ZNF541-203ENST00000391901 PELP1Q8IZL8 1130 aaKnown RBP22.78■■□□□ 1.24
ZNF541-203ENST00000391901 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
ZNF541-203ENST00000391901 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
ZNF541-203ENST00000391901 APLP2Q06481 763 aa22.65■■□□□ 1.22
ZNF541-203ENST00000391901 TTBK1Q5TCY1 1321 aaPredicted RBP22.64■■□□□ 1.22
ZNF541-203ENST00000391901 MYT1Q01538 1121 aa22.46■■□□□ 1.19
ZNF541-203ENST00000391901 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
ZNF541-203ENST00000391901 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
ZNF541-203ENST00000391901 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
ZNF541-203ENST00000391901 CCER1Q8TC90 406 aaPredicted RBP22.11■■□□□ 1.13
ZNF541-203ENST00000391901 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
ZNF541-203ENST00000391901 LOC105371045A0A1W2PR82 267 aa22.09■■□□□ 1.13
ZNF541-203ENST00000391901 ZEB1P37275 1124 aaPredicted RBP22.07■■□□□ 1.12
ZNF541-203ENST00000391901 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
ZNF541-203ENST00000391901 HRCP23327 699 aa21.95■■□□□ 1.1
ZNF541-203ENST00000391901 ABCC9O60706 1549 aa21.92■■□□□ 1.1
ZNF541-203ENST00000391901 TRIM26Q12899 539 aaPredicted RBP21.86■■□□□ 1.09
ZNF541-203ENST00000391901 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
ZNF541-203ENST00000391901 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
ZNF541-203ENST00000391901 ITGAEP38570 1179 aa21.5■■□□□ 1.03
ZNF541-203ENST00000391901 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
ZNF541-203ENST00000391901 YTHDC1Q96MU7 727 aaKnown RBP21.45■■□□□ 1.02
ZNF541-203ENST00000391901 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
ZNF541-203ENST00000391901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.31■■□□□ 1
ZNF541-203ENST00000391901 SCRIBQ14160 1630 aa21.13■□□□□ 0.97
ZNF541-203ENST00000391901 ERICH6Q7L0X2 663 aa21.07■□□□□ 0.96
ZNF541-203ENST00000391901 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
ZNF541-203ENST00000391901 NEFLP07196 543 aa21.04■□□□□ 0.96
ZNF541-203ENST00000391901 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
ZNF541-203ENST00000391901 FAM50AQ14320 339 aaKnown RBP20.98■□□□□ 0.95
ZNF541-203ENST00000391901 POLR3GLQ9BT43 218 aa20.94■□□□□ 0.94
ZNF541-203ENST00000391901 MYT1LQ9UL68 1186 aa20.94■□□□□ 0.94
ZNF541-203ENST00000391901 DIEXFQ68CQ4 756 aaKnown RBP20.92■□□□□ 0.94
ZNF541-203ENST00000391901 CNGB1Q14028 1251 aaPredicted RBP20.85■□□□□ 0.93
ZNF541-203ENST00000391901 P3H3Q8IVL6 736 aa20.79■□□□□ 0.92
ZNF541-203ENST00000391901 NEUROD1Q13562 356 aa20.76■□□□□ 0.91
ZNF541-203ENST00000391901 TRIM52Q96A61 297 aa20.73■□□□□ 0.91
ZNF541-203ENST00000391901 FBLN2P98095 1184 aa20.71■□□□□ 0.91
ZNF541-203ENST00000391901 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
ZNF541-203ENST00000391901 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
ZNF541-203ENST00000391901 ARID3CA6NKF2 412 aa20.63■□□□□ 0.89
ZNF541-203ENST00000391901 GTF3C3Q9Y5Q9 886 aa20.63■□□□□ 0.89
ZNF541-203ENST00000391901 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
ZNF541-203ENST00000391901 ZNF316A6NFI3 1004 aaPredicted RBP20.54■□□□□ 0.88
ZNF541-203ENST00000391901 RB1CC1Q8TDY2 1594 aa20.5■□□□□ 0.87
ZNF541-203ENST00000391901 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
ZNF541-203ENST00000391901 ZNF326Q5BKZ1 582 aaKnown RBP20.46■□□□□ 0.87
ZNF541-203ENST00000391901 NACADO15069 1562 aa20.42■□□□□ 0.86
ZNF541-203ENST00000391901 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
ZNF541-203ENST00000391901 SCAF1Q9H7N4 1312 aaKnown RBP20.36■□□□□ 0.85
ZNF541-203ENST00000391901 ANP32CO43423 234 aa20.34■□□□□ 0.85
ZNF541-203ENST00000391901 ZNF777Q9ULD5 760 aaPredicted RBP20.34■□□□□ 0.85
ZNF541-203ENST00000391901 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
ZNF541-203ENST00000391901 CLIP1P30622 1438 aa20.27■□□□□ 0.84
ZNF541-203ENST00000391901 CDK11AQ9UQ88 783 aaPredicted RBP20.26■□□□□ 0.83
ZNF541-203ENST00000391901 BCANQ96GW7 911 aa20.26■□□□□ 0.83
ZNF541-203ENST00000391901 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
ZNF541-203ENST00000391901 CEP162Q5TB80 1403 aa20.19■□□□□ 0.82
ZNF541-203ENST00000391901 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
ZNF541-203ENST00000391901 EEA1Q15075 1411 aa20.17■□□□□ 0.82
ZNF541-203ENST00000391901 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
ZNF541-203ENST00000391901 DAXXQ9UER7 740 aaPredicted RBP20.15■□□□□ 0.82
ZNF541-203ENST00000391901 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.81
ZNF541-203ENST00000391901 GOLGA3Q08378 1498 aa20.13■□□□□ 0.81
ZNF541-203ENST00000391901 TONSLQ96HA7 1378 aa20.11■□□□□ 0.81
ZNF541-203ENST00000391901 MTUS2Q5JR59 1369 aa20.06■□□□□ 0.8
ZNF541-203ENST00000391901 DDX10Q13206 875 aaKnown RBP20.06■□□□□ 0.8
ZNF541-203ENST00000391901 TNIKQ9UKE5 1360 aa20.05■□□□□ 0.8
ZNF541-203ENST00000391901 MROH2BQ7Z745 1585 aa20.03■□□□□ 0.8
ZNF541-203ENST00000391901 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
ZNF541-203ENST00000391901 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
ZNF541-203ENST00000391901 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
ZNF541-203ENST00000391901 SOGA1O94964 1423 aa19.97■□□□□ 0.79
ZNF541-203ENST00000391901 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
ZNF541-203ENST00000391901 RTL5Q5HYW3 569 aaPredicted RBP19.94■□□□□ 0.78
ZNF541-203ENST00000391901 HIRIP3Q9BW71 556 aaPredicted RBP19.92■□□□□ 0.78
ZNF541-203ENST00000391901 RRP7BPQ9NSQ0 103 aa19.9■□□□□ 0.78
ZNF541-203ENST00000391901 MIER1Q8N108 512 aa19.9■□□□□ 0.78
ZNF541-203ENST00000391901 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
ZNF541-203ENST00000391901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
ZNF541-203ENST00000391901 TSPY4P0CV99 314 aa19.87■□□□□ 0.77
ZNF541-203ENST00000391901 TSPY10P0CW01 314 aa19.87■□□□□ 0.77
ZNF541-203ENST00000391901 HNRNPUQ00839 825 aaKnown RBP eCLIP19.84■□□□□ 0.77
ZNF541-203ENST00000391901 BCL11AQ9H165 835 aa19.84■□□□□ 0.77
ZNF541-203ENST00000391901 CHGAP10645 457 aaKnown RBP19.83■□□□□ 0.76
ZNF541-203ENST00000391901 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
ZNF541-203ENST00000391901 FAM9BQ8IZU0 186 aa19.81■□□□□ 0.76
ZNF541-203ENST00000391901 NPM1P06748 294 aaKnown RBP eCLIP19.8■□□□□ 0.76
ZNF541-203ENST00000391901 FKBP8Q14318 412 aa19.8■□□□□ 0.76
ZNF541-203ENST00000391901 KDM2AQ9Y2K7 1162 aa19.79■□□□□ 0.76
ZNF541-203ENST00000391901 CUX2O14529 1486 aa19.72■□□□□ 0.75
ZNF541-203ENST00000391901 PLEKHD1A6NEE1 506 aa19.72■□□□□ 0.75
ZNF541-203ENST00000391901 CARMIL1Q5VZK9 1371 aa19.72■□□□□ 0.75
ZNF541-203ENST00000391901 KCNH8Q96L42 1107 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms