RNA–Protein interactions for RNA: ENST00000611109.1

RREB1-210, Transcript of ras responsive element binding protein 1, humanhuman

TSL 5 BASIC

Gene RREB1, Length 3,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RREB1-210ENST00000611109 NISCHQ9Y2I1 1504 aa26.5■■□□□ 1.83
RREB1-210ENST00000611109 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.5
RREB1-210ENST00000611109 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
RREB1-210ENST00000611109 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
RREB1-210ENST00000611109 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
RREB1-210ENST00000611109 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
RREB1-210ENST00000611109 PPARGC1BQ86YN6 1023 aaKnown RBP22.97■■□□□ 1.27
RREB1-210ENST00000611109 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
RREB1-210ENST00000611109 LOC105371045A0A1W2PR82 267 aa22.86■■□□□ 1.25
RREB1-210ENST00000611109 HRCP23327 699 aa22.8■■□□□ 1.24
RREB1-210ENST00000611109 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
RREB1-210ENST00000611109 FAM9AQ8IZU1 332 aaPredicted RBP22.65■■□□□ 1.22
RREB1-210ENST00000611109 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
RREB1-210ENST00000611109 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
RREB1-210ENST00000611109 TRIM41Q8WV44 630 aa22.14■■□□□ 1.13
RREB1-210ENST00000611109 ABCC9O60706 1549 aa22.12■■□□□ 1.13
RREB1-210ENST00000611109 PELP1Q8IZL8 1130 aaKnown RBP22.12■■□□□ 1.13
RREB1-210ENST00000611109 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
RREB1-210ENST00000611109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
RREB1-210ENST00000611109 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
RREB1-210ENST00000611109 CCER1Q8TC90 406 aaPredicted RBP21.64■■□□□ 1.06
RREB1-210ENST00000611109 CCDC180Q9P1Z9 1646 aa21.63■■□□□ 1.05
RREB1-210ENST00000611109 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
RREB1-210ENST00000611109 ZEB1P37275 1124 aaPredicted RBP21.54■■□□□ 1.04
RREB1-210ENST00000611109 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.04
RREB1-210ENST00000611109 SCRIBQ14160 1630 aa21.48■■□□□ 1.03
RREB1-210ENST00000611109 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.02
RREB1-210ENST00000611109 YTHDC1Q96MU7 727 aaKnown RBP21.39■■□□□ 1.01
RREB1-210ENST00000611109 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
RREB1-210ENST00000611109 UBTFP17480 764 aaKnown RBP21.31■■□□□ 1
RREB1-210ENST00000611109 MYT1Q01538 1121 aa21.28■■□□□ 1
RREB1-210ENST00000611109 RB1CC1Q8TDY2 1594 aa21.2■□□□□ 0.98
RREB1-210ENST00000611109 NEUROD1Q13562 356 aa21.17■□□□□ 0.98
RREB1-210ENST00000611109 HNRNPUL2Q1KMD3 747 aaKnown RBP21.17■□□□□ 0.98
RREB1-210ENST00000611109 DIEXFQ68CQ4 756 aaKnown RBP21.17■□□□□ 0.98
RREB1-210ENST00000611109 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
RREB1-210ENST00000611109 GTF3C3Q9Y5Q9 886 aa21.12■□□□□ 0.97
RREB1-210ENST00000611109 ACIN1Q9UKV3 1341 aaKnown RBP21.01■□□□□ 0.95
RREB1-210ENST00000611109 CENPBP07199 599 aaPredicted RBP21.01■□□□□ 0.95
RREB1-210ENST00000611109 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
RREB1-210ENST00000611109 APLP2Q06481 763 aa20.87■□□□□ 0.93
RREB1-210ENST00000611109 ITGAEP38570 1179 aa20.76■□□□□ 0.91
RREB1-210ENST00000611109 CSRNP3Q8WYN3 585 aa20.76■□□□□ 0.91
RREB1-210ENST00000611109 WIZO95785 1651 aa20.74■□□□□ 0.91
RREB1-210ENST00000611109 ABCC8Q09428 1581 aa20.74■□□□□ 0.91
RREB1-210ENST00000611109 SOGA1O94964 1423 aa20.73■□□□□ 0.91
RREB1-210ENST00000611109 ZNF316A6NFI3 1004 aaPredicted RBP20.71■□□□□ 0.91
RREB1-210ENST00000611109 MIER1Q8N108 512 aa20.7■□□□□ 0.9
RREB1-210ENST00000611109 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
RREB1-210ENST00000611109 CEP162Q5TB80 1403 aa20.66■□□□□ 0.9
RREB1-210ENST00000611109 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
RREB1-210ENST00000611109 ATP1B4Q9UN42 357 aaPredicted RBP20.51■□□□□ 0.87
RREB1-210ENST00000611109 NACADO15069 1562 aa20.45■□□□□ 0.86
RREB1-210ENST00000611109 BCANQ96GW7 911 aa20.38■□□□□ 0.85
RREB1-210ENST00000611109 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
RREB1-210ENST00000611109 CLIP1P30622 1438 aa20.29■□□□□ 0.84
RREB1-210ENST00000611109 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
RREB1-210ENST00000611109 HIRIP3Q9BW71 556 aaPredicted RBP20.25■□□□□ 0.83
RREB1-210ENST00000611109 BCL11AQ9H165 835 aa20.24■□□□□ 0.83
RREB1-210ENST00000611109 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
RREB1-210ENST00000611109 P3H3Q8IVL6 736 aa20.23■□□□□ 0.83
RREB1-210ENST00000611109 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
RREB1-210ENST00000611109 KANK4Q5T7N3 995 aaPredicted RBP20.19■□□□□ 0.82
RREB1-210ENST00000611109 FAM50AQ14320 339 aaKnown RBP20.14■□□□□ 0.82
RREB1-210ENST00000611109 KCNH8Q96L42 1107 aa20.14■□□□□ 0.81
RREB1-210ENST00000611109 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
RREB1-210ENST00000611109 SMARCA2P51531 1590 aa20.08■□□□□ 0.81
RREB1-210ENST00000611109 DDX10Q13206 875 aaKnown RBP20.06■□□□□ 0.8
RREB1-210ENST00000611109 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
RREB1-210ENST00000611109 CNGB1Q14028 1251 aaPredicted RBP20.04■□□□□ 0.8
RREB1-210ENST00000611109 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
RREB1-210ENST00000611109 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
RREB1-210ENST00000611109 CEP164Q9UPV0 1460 aa20■□□□□ 0.79
RREB1-210ENST00000611109 EEA1Q15075 1411 aa20■□□□□ 0.79
RREB1-210ENST00000611109 SIN3AQ96ST3 1273 aa19.99■□□□□ 0.79
RREB1-210ENST00000611109 SUPT16HQ9Y5B9 1047 aaKnown RBP19.98■□□□□ 0.79
RREB1-210ENST00000611109 TRIM52Q96A61 297 aa19.97■□□□□ 0.79
RREB1-210ENST00000611109 VPS8Q8N3P4 1428 aa19.96■□□□□ 0.79
RREB1-210ENST00000611109 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
RREB1-210ENST00000611109 FKBP8Q14318 412 aa19.92■□□□□ 0.78
RREB1-210ENST00000611109 BICRAQ9NZM4 1560 aa19.88■□□□□ 0.77
RREB1-210ENST00000611109 ANP32EQ9BTT0 268 aa19.88■□□□□ 0.77
RREB1-210ENST00000611109 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
RREB1-210ENST00000611109 DHX57Q6P158 1386 aaKnown RBP19.86■□□□□ 0.77
RREB1-210ENST00000611109 ARID3CA6NKF2 412 aa19.85■□□□□ 0.77
RREB1-210ENST00000611109 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
RREB1-210ENST00000611109 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
RREB1-210ENST00000611109 NEFLP07196 543 aa19.82■□□□□ 0.76
RREB1-210ENST00000611109 IRX6P78412 446 aaPredicted RBP19.82■□□□□ 0.76
RREB1-210ENST00000611109 SENP3-EIF4A1A0A087X0R7 540 aa19.76■□□□□ 0.75
RREB1-210ENST00000611109 TSHZ2Q9NRE2 1034 aa19.73■□□□□ 0.75
RREB1-210ENST00000611109 KIF21BO75037 1637 aa19.73■□□□□ 0.75
RREB1-210ENST00000611109 PRKCSHP14314 528 aaPredicted RBP19.7■□□□□ 0.74
RREB1-210ENST00000611109 POLR3GLQ9BT43 218 aa19.7■□□□□ 0.74
RREB1-210ENST00000611109 CCNB3Q8WWL7 1395 aa19.7■□□□□ 0.74
RREB1-210ENST00000611109 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
RREB1-210ENST00000611109 RAB3GAP2Q9H2M9 1393 aa19.67■□□□□ 0.74
RREB1-210ENST00000611109 ANP32CO43423 234 aa19.65■□□□□ 0.74
RREB1-210ENST00000611109 CHIC2Q9UKJ5 165 aa19.65■□□□□ 0.74
RREB1-210ENST00000611109 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms