RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.02
PDE4DIP-227ENST00000529945 ERICH6Q7L0X2 663 aa20.72■□□□□ 0.91
PDE4DIP-227ENST00000529945 MYT1Q01538 1121 aa20.53■□□□□ 0.88
PDE4DIP-227ENST00000529945 CCER1Q8TC90 406 aaPredicted RBP20.34■□□□□ 0.85
PDE4DIP-227ENST00000529945 TTBK1Q5TCY1 1321 aaPredicted RBP19.83■□□□□ 0.76
PDE4DIP-227ENST00000529945 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
PDE4DIP-227ENST00000529945 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
PDE4DIP-227ENST00000529945 CENPBP07199 599 aaPredicted RBP19.7■□□□□ 0.74
PDE4DIP-227ENST00000529945 DAXXQ9UER7 740 aaPredicted RBP19.46■□□□□ 0.7
PDE4DIP-227ENST00000529945 NEFLP07196 543 aa19.44■□□□□ 0.7
PDE4DIP-227ENST00000529945 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
PDE4DIP-227ENST00000529945 APLP2Q06481 763 aa19.16■□□□□ 0.66
PDE4DIP-227ENST00000529945 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
PDE4DIP-227ENST00000529945 RTL5Q5HYW3 569 aaPredicted RBP19.02■□□□□ 0.63
PDE4DIP-227ENST00000529945 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
PDE4DIP-227ENST00000529945 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
PDE4DIP-227ENST00000529945 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.6
PDE4DIP-227ENST00000529945 RANGAP1P46060 587 aaPredicted RBP18.69■□□□□ 0.58
PDE4DIP-227ENST00000529945 FAM9AQ8IZU1 332 aaPredicted RBP18.67■□□□□ 0.58
PDE4DIP-227ENST00000529945 GLIPR1L2Q4G1C9 344 aa18.63■□□□□ 0.57
PDE4DIP-227ENST00000529945 EIF5BO60841 1220 aaKnown RBP18.61■□□□□ 0.57
PDE4DIP-227ENST00000529945 SHROOM4Q9ULL8 1493 aa18.53■□□□□ 0.56
PDE4DIP-227ENST00000529945 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
PDE4DIP-227ENST00000529945 ATP1B4Q9UN42 357 aaPredicted RBP18.25■□□□□ 0.51
PDE4DIP-227ENST00000529945 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
PDE4DIP-227ENST00000529945 CNGB1Q14028 1251 aaPredicted RBP18.11■□□□□ 0.49
PDE4DIP-227ENST00000529945 ANP32BQ92688 251 aaKnown RBP18.1■□□□□ 0.49
PDE4DIP-227ENST00000529945 HRCP23327 699 aa17.98■□□□□ 0.47
PDE4DIP-227ENST00000529945 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
PDE4DIP-227ENST00000529945 CDK11AQ9UQ88 783 aaPredicted RBP17.96■□□□□ 0.47
PDE4DIP-227ENST00000529945 ZBTB47Q9UFB7 747 aaPredicted RBP17.95■□□□□ 0.46
PDE4DIP-227ENST00000529945 BCANQ96GW7 911 aa17.87■□□□□ 0.45
PDE4DIP-227ENST00000529945 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
PDE4DIP-227ENST00000529945 TNNT2P45379 298 aaPredicted RBP17.85■□□□□ 0.45
PDE4DIP-227ENST00000529945 ANP32AP39687 249 aaKnown RBP17.84■□□□□ 0.45
PDE4DIP-227ENST00000529945 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
PDE4DIP-227ENST00000529945 CDK11BP21127 795 aaKnown RBP17.74■□□□□ 0.43
PDE4DIP-227ENST00000529945 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
PDE4DIP-227ENST00000529945 HSP90AA1P07900 732 aaKnown RBP17.7■□□□□ 0.42
PDE4DIP-227ENST00000529945 PPARGC1BQ86YN6 1023 aaKnown RBP17.69■□□□□ 0.42
PDE4DIP-227ENST00000529945 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
PDE4DIP-227ENST00000529945 GTF3C3Q9Y5Q9 886 aa17.68■□□□□ 0.42
PDE4DIP-227ENST00000529945 UBTFP17480 764 aaKnown RBP17.68■□□□□ 0.42
PDE4DIP-227ENST00000529945 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
PDE4DIP-227ENST00000529945 ARXQ96QS3 562 aa17.67■□□□□ 0.42
PDE4DIP-227ENST00000529945 MYT1LQ9UL68 1186 aa17.66■□□□□ 0.42
PDE4DIP-227ENST00000529945 AMER1Q5JTC6 1135 aaPredicted RBP17.64■□□□□ 0.41
PDE4DIP-227ENST00000529945 CANXP27824 592 aaKnown RBP17.61■□□□□ 0.41
PDE4DIP-227ENST00000529945 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
PDE4DIP-227ENST00000529945 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
PDE4DIP-227ENST00000529945 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
PDE4DIP-227ENST00000529945 NBR1Q14596 966 aa17.58■□□□□ 0.41
PDE4DIP-227ENST00000529945 ITGAEP38570 1179 aa17.54■□□□□ 0.4
PDE4DIP-227ENST00000529945 TRIM44Q96DX7 344 aaPredicted RBP17.43■□□□□ 0.38
PDE4DIP-227ENST00000529945 UPF2Q9HAU5 1272 aaKnown RBP17.4■□□□□ 0.38
PDE4DIP-227ENST00000529945 ZNF326Q5BKZ1 582 aaKnown RBP17.32■□□□□ 0.36
PDE4DIP-227ENST00000529945 DNTTIP2Q5QJE6 756 aaKnown RBP17.28■□□□□ 0.36
PDE4DIP-227ENST00000529945 ANP32CO43423 234 aa17.27■□□□□ 0.35
PDE4DIP-227ENST00000529945 NAP1L5Q96NT1 182 aaPredicted RBP17.26■□□□□ 0.35
PDE4DIP-227ENST00000529945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
PDE4DIP-227ENST00000529945 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
PDE4DIP-227ENST00000529945 NEFMP07197 916 aa17.22■□□□□ 0.35
PDE4DIP-227ENST00000529945 NCLP19338 710 aaKnown RBP17.21■□□□□ 0.35
PDE4DIP-227ENST00000529945 CALRP27797 417 aaKnown RBP17.16■□□□□ 0.34
PDE4DIP-227ENST00000529945 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
PDE4DIP-227ENST00000529945 LOC105371045A0A1W2PR82 267 aa17.14■□□□□ 0.33
PDE4DIP-227ENST00000529945 PTMAP06454 111 aaKnown RBP17.13■□□□□ 0.33
PDE4DIP-227ENST00000529945 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
PDE4DIP-227ENST00000529945 ERICH6BQ5W0A0 696 aa17.05■□□□□ 0.32
PDE4DIP-227ENST00000529945 TNNT3P45378 269 aaPredicted RBP17.04■□□□□ 0.32
PDE4DIP-227ENST00000529945 TULP1O00294 542 aaPredicted RBP17.02■□□□□ 0.32
PDE4DIP-227ENST00000529945 FKBP8Q14318 412 aa17.01■□□□□ 0.31
PDE4DIP-227ENST00000529945 ZRSR1Q15695 479 aaKnown RBP17.01■□□□□ 0.31
PDE4DIP-227ENST00000529945 NEUROD1Q13562 356 aa17■□□□□ 0.31
PDE4DIP-227ENST00000529945 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
PDE4DIP-227ENST00000529945 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
PDE4DIP-227ENST00000529945 GOLGA6L22H0YM25 854 aa16.94■□□□□ 0.3
PDE4DIP-227ENST00000529945 CHAF1AQ13111 956 aaPredicted RBP16.91■□□□□ 0.3
PDE4DIP-227ENST00000529945 TPRNQ4KMQ1 711 aa16.9■□□□□ 0.3
PDE4DIP-227ENST00000529945 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
PDE4DIP-227ENST00000529945 BECN1Q14457 450 aa16.89■□□□□ 0.29
PDE4DIP-227ENST00000529945 TRIM52Q96A61 297 aa16.87■□□□□ 0.29
PDE4DIP-227ENST00000529945 GOLGA6L6A8MZA4 724 aa16.86■□□□□ 0.29
PDE4DIP-227ENST00000529945 CCDC136Q96JN2 1154 aa16.85■□□□□ 0.29
PDE4DIP-227ENST00000529945 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.28
PDE4DIP-227ENST00000529945 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.82■□□□□ 0.28
PDE4DIP-227ENST00000529945 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
PDE4DIP-227ENST00000529945 ARID3AQ99856 593 aa16.82■□□□□ 0.28
PDE4DIP-227ENST00000529945 PLCB2Q00722 1185 aa16.8■□□□□ 0.28
PDE4DIP-227ENST00000529945 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
PDE4DIP-227ENST00000529945 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.76■□□□□ 0.27
PDE4DIP-227ENST00000529945 MSNP26038 577 aaKnown RBP16.75■□□□□ 0.27
PDE4DIP-227ENST00000529945 NRDCO43847 1150 aa16.73■□□□□ 0.27
PDE4DIP-227ENST00000529945 NOC3LQ8WTT2 800 aaKnown RBP16.73■□□□□ 0.27
PDE4DIP-227ENST00000529945 MYH16Q9H6N6 1097 aa16.73■□□□□ 0.27
PDE4DIP-227ENST00000529945 SETQ01105 290 aaPredicted RBP16.69■□□□□ 0.26
PDE4DIP-227ENST00000529945 PTMSP20962 102 aa16.67■□□□□ 0.26
PDE4DIP-227ENST00000529945 PRM3Q9NNZ6 103 aa16.66■□□□□ 0.26
PDE4DIP-227ENST00000529945 HNRNPUQ00839 825 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDE4DIP-227ENST00000529945 L1TD1Q5T7N2 865 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms