RNA–Protein interactions for RNA: ENST00000607016.1

NUDT3-201, Transcript of nudix hydrolase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDT3, Length 9,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDT3-201ENST00000607016 PELP1Q8IZL8 1130 aaKnown RBP22.28■■□□□ 1.16
NUDT3-201ENST00000607016 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
NUDT3-201ENST00000607016 ERICH6Q7L0X2 663 aa21.68■■□□□ 1.06
NUDT3-201ENST00000607016 MYT1Q01538 1121 aa21.56■■□□□ 1.04
NUDT3-201ENST00000607016 EHMT2Q96KQ7 1210 aa21.5■■□□□ 1.03
NUDT3-201ENST00000607016 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
NUDT3-201ENST00000607016 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
NUDT3-201ENST00000607016 CCER1Q8TC90 406 aaPredicted RBP21.18■□□□□ 0.98
NUDT3-201ENST00000607016 PCGF6Q9BYE7 350 aa21.08■□□□□ 0.97
NUDT3-201ENST00000607016 TTBK1Q5TCY1 1321 aaPredicted RBP20.94■□□□□ 0.94
NUDT3-201ENST00000607016 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
NUDT3-201ENST00000607016 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
NUDT3-201ENST00000607016 NEFLP07196 543 aa20.69■□□□□ 0.9
NUDT3-201ENST00000607016 APLP2Q06481 763 aa20.62■□□□□ 0.89
NUDT3-201ENST00000607016 ZEB1P37275 1124 aaPredicted RBP20.49■□□□□ 0.87
NUDT3-201ENST00000607016 FAM9AQ8IZU1 332 aaPredicted RBP20.42■□□□□ 0.86
NUDT3-201ENST00000607016 DAXXQ9UER7 740 aaPredicted RBP20.35■□□□□ 0.85
NUDT3-201ENST00000607016 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
NUDT3-201ENST00000607016 RTL5Q5HYW3 569 aaPredicted RBP20.11■□□□□ 0.81
NUDT3-201ENST00000607016 HRCP23327 699 aa19.95■□□□□ 0.78
NUDT3-201ENST00000607016 PPARGC1BQ86YN6 1023 aaKnown RBP19.94■□□□□ 0.78
NUDT3-201ENST00000607016 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
NUDT3-201ENST00000607016 ATP1B4Q9UN42 357 aaPredicted RBP19.82■□□□□ 0.76
NUDT3-201ENST00000607016 CNGB1Q14028 1251 aaPredicted RBP19.73■□□□□ 0.75
NUDT3-201ENST00000607016 EIF5BO60841 1220 aaKnown RBP19.72■□□□□ 0.75
NUDT3-201ENST00000607016 BCANQ96GW7 911 aa19.7■□□□□ 0.74
NUDT3-201ENST00000607016 POLR3GLQ9BT43 218 aa19.69■□□□□ 0.74
NUDT3-201ENST00000607016 GTF3C3Q9Y5Q9 886 aa19.65■□□□□ 0.74
NUDT3-201ENST00000607016 CLSPNQ9HAW4 1339 aa19.61■□□□□ 0.73
NUDT3-201ENST00000607016 TRIM26Q12899 539 aaPredicted RBP19.6■□□□□ 0.73
NUDT3-201ENST00000607016 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
NUDT3-201ENST00000607016 UBTFP17480 764 aaKnown RBP19.55■□□□□ 0.72
NUDT3-201ENST00000607016 DIEXFQ68CQ4 756 aaKnown RBP19.51■□□□□ 0.71
NUDT3-201ENST00000607016 ITGAEP38570 1179 aa19.37■□□□□ 0.69
NUDT3-201ENST00000607016 GLIPR1L2Q4G1C9 344 aa19.34■□□□□ 0.69
NUDT3-201ENST00000607016 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
NUDT3-201ENST00000607016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.26■□□□□ 0.67
NUDT3-201ENST00000607016 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
NUDT3-201ENST00000607016 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
NUDT3-201ENST00000607016 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
NUDT3-201ENST00000607016 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
NUDT3-201ENST00000607016 BCL11AQ9H165 835 aa19.13■□□□□ 0.65
NUDT3-201ENST00000607016 ANP32AP39687 249 aaKnown RBP19.11■□□□□ 0.65
NUDT3-201ENST00000607016 NBR1Q14596 966 aa19.1■□□□□ 0.65
NUDT3-201ENST00000607016 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.64
NUDT3-201ENST00000607016 ACIN1Q9UKV3 1341 aaKnown RBP19.07■□□□□ 0.64
NUDT3-201ENST00000607016 ARXQ96QS3 562 aa19.01■□□□□ 0.63
NUDT3-201ENST00000607016 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
NUDT3-201ENST00000607016 ANP32BQ92688 251 aaKnown RBP18.91■□□□□ 0.62
NUDT3-201ENST00000607016 MYT1LQ9UL68 1186 aa18.84■□□□□ 0.61
NUDT3-201ENST00000607016 ZBTB47Q9UFB7 747 aaPredicted RBP18.83■□□□□ 0.6
NUDT3-201ENST00000607016 ANP32CO43423 234 aa18.83■□□□□ 0.6
NUDT3-201ENST00000607016 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
NUDT3-201ENST00000607016 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
NUDT3-201ENST00000607016 FKBP8Q14318 412 aa18.77■□□□□ 0.6
NUDT3-201ENST00000607016 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
NUDT3-201ENST00000607016 HSP90AA1P07900 732 aaKnown RBP18.72■□□□□ 0.59
NUDT3-201ENST00000607016 RTN4Q9NQC3 1192 aaKnown RBP18.7■□□□□ 0.58
NUDT3-201ENST00000607016 ZNF326Q5BKZ1 582 aaKnown RBP18.61■□□□□ 0.57
NUDT3-201ENST00000607016 AMER1Q5JTC6 1135 aaPredicted RBP18.61■□□□□ 0.57
NUDT3-201ENST00000607016 SLC24A1O60721 1099 aa18.58■□□□□ 0.57
NUDT3-201ENST00000607016 FAM50AQ14320 339 aaKnown RBP18.58■□□□□ 0.57
NUDT3-201ENST00000607016 TNNT2P45379 298 aaPredicted RBP18.54■□□□□ 0.56
NUDT3-201ENST00000607016 TRIM52Q96A61 297 aa18.5■□□□□ 0.55
NUDT3-201ENST00000607016 ANP32EQ9BTT0 268 aa18.48■□□□□ 0.55
NUDT3-201ENST00000607016 NAP1L5Q96NT1 182 aaPredicted RBP18.46■□□□□ 0.54
NUDT3-201ENST00000607016 UPF2Q9HAU5 1272 aaKnown RBP18.45■□□□□ 0.54
NUDT3-201ENST00000607016 IRX6P78412 446 aaPredicted RBP18.41■□□□□ 0.54
NUDT3-201ENST00000607016 CDK11BP21127 795 aaKnown RBP18.41■□□□□ 0.54
NUDT3-201ENST00000607016 TRIM44Q96DX7 344 aaPredicted RBP18.37■□□□□ 0.53
NUDT3-201ENST00000607016 CCDC136Q96JN2 1154 aa18.35■□□□□ 0.53
NUDT3-201ENST00000607016 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
NUDT3-201ENST00000607016 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.3■□□□□ 0.52
NUDT3-201ENST00000607016 NEFMP07197 916 aa18.3■□□□□ 0.52
NUDT3-201ENST00000607016 SALL2Q9Y467 1007 aaPredicted RBP18.28■□□□□ 0.52
NUDT3-201ENST00000607016 FAM9BQ8IZU0 186 aa18.26■□□□□ 0.51
NUDT3-201ENST00000607016 ARID4BQ4LE39 1312 aaPredicted RBP18.26■□□□□ 0.51
NUDT3-201ENST00000607016 DNTTIP2Q5QJE6 756 aaKnown RBP18.24■□□□□ 0.51
NUDT3-201ENST00000607016 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
NUDT3-201ENST00000607016 PTMAP06454 111 aaKnown RBP18.19■□□□□ 0.5
NUDT3-201ENST00000607016 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
NUDT3-201ENST00000607016 TPRNQ4KMQ1 711 aa18.18■□□□□ 0.5
NUDT3-201ENST00000607016 ARID3AQ99856 593 aa18.13■□□□□ 0.49
NUDT3-201ENST00000607016 NCLP19338 710 aaKnown RBP18.12■□□□□ 0.49
NUDT3-201ENST00000607016 DDX10Q13206 875 aaKnown RBP18.12■□□□□ 0.49
NUDT3-201ENST00000607016 DEKP35659 375 aaKnown RBP18.1■□□□□ 0.49
NUDT3-201ENST00000607016 DDRGK1Q96HY6 314 aa18.08■□□□□ 0.49
NUDT3-201ENST00000607016 MIER1Q8N108 512 aa18.06■□□□□ 0.48
NUDT3-201ENST00000607016 BECN1Q14457 450 aa18.05■□□□□ 0.48
NUDT3-201ENST00000607016 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.04■□□□□ 0.48
NUDT3-201ENST00000607016 NOP58Q9Y2X3 529 aaKnown RBP17.99■□□□□ 0.47
NUDT3-201ENST00000607016 GOLGA6L22H0YM25 854 aa17.97■□□□□ 0.47
NUDT3-201ENST00000607016 ZBTB7CA1YPR0 619 aa17.94■□□□□ 0.46
NUDT3-201ENST00000607016 SENP3-EIF4A1A0A087X0R7 540 aa17.92■□□□□ 0.46
NUDT3-201ENST00000607016 PLCB2Q00722 1185 aa17.91■□□□□ 0.46
NUDT3-201ENST00000607016 TMC1Q8TDI8 760 aa17.89■□□□□ 0.45
NUDT3-201ENST00000607016 PPM1GO15355 546 aaPredicted RBP17.88■□□□□ 0.45
NUDT3-201ENST00000607016 MRS2Q9HD23 443 aa17.88■□□□□ 0.45
NUDT3-201ENST00000607016 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
NUDT3-201ENST00000607016 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms