Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 AC134043.2-201ENST00000624206 2238 ntBASIC18.88■□□□□ 0.61
RFX6Q8HWS3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
RFX6Q8HWS3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.87■□□□□ 0.61
RFX6Q8HWS3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RFX6Q8HWS3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 AC087499.1-201ENST00000418141 1075 ntBASIC18.86■□□□□ 0.61
RFX6Q8HWS3 ECEL1P3-201ENST00000427961 737 ntBASIC18.86■□□□□ 0.61
RFX6Q8HWS3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 NEK4P2-201ENST00000580004 1012 ntBASIC18.86■□□□□ 0.61
RFX6Q8HWS3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 AC092865.7-201ENST00000641832 219 ntBASIC18.86■□□□□ 0.61
RFX6Q8HWS3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX6Q8HWS3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 GNAS-203ENST00000306120 1878 ntBASIC18.85■□□□□ 0.61
RFX6Q8HWS3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX6Q8HWS3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms