RNA–Protein interactions for RNA: ENST00000526406.5

GSDMD-206, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 2 BASIC

Gene GSDMD, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-206ENST00000526406 NISCHQ9Y2I1 1504 aa37.57■■■■□ 3.61
GSDMD-206ENST00000526406 SHROOM4Q9ULL8 1493 aa32.08■■■□□ 2.73
GSDMD-206ENST00000526406 CCDC180Q9P1Z9 1646 aa31.99■■■□□ 2.71
GSDMD-206ENST00000526406 ZCCHC6Q5VYS8 1495 aaKnown RBP31.7■■■□□ 2.66
GSDMD-206ENST00000526406 DCAF8L2P0C7V8 631 aa31.54■■■□□ 2.64
GSDMD-206ENST00000526406 SUPT5HO00267 1087 aaKnown RBP31.3■■■□□ 2.6
GSDMD-206ENST00000526406 DCAF1Q9Y4B6 1507 aa30.68■■■□□ 2.5
GSDMD-206ENST00000526406 CHIC1Q5VXU3 224 aa30.44■■■□□ 2.46
GSDMD-206ENST00000526406 MYO15BQ96JP2 1530 aa30.33■■■□□ 2.45
GSDMD-206ENST00000526406 ABCC9O60706 1549 aa30.16■■■□□ 2.42
GSDMD-206ENST00000526406 SCRIBQ14160 1630 aa30.15■■■□□ 2.42
GSDMD-206ENST00000526406 NACADO15069 1562 aa29.68■■■□□ 2.34
GSDMD-206ENST00000526406 RSF1Q96T23 1441 aaPredicted RBP29.66■■■□□ 2.34
GSDMD-206ENST00000526406 LOC105371045A0A1W2PR82 267 aa29.56■■■□□ 2.32
GSDMD-206ENST00000526406 HRCP23327 699 aa29.55■■■□□ 2.32
GSDMD-206ENST00000526406 PCGF6Q9BYE7 350 aa29.55■■■□□ 2.32
GSDMD-206ENST00000526406 CECR2Q9BXF3 1484 aa29.45■■■□□ 2.3
GSDMD-206ENST00000526406 RB1CC1Q8TDY2 1594 aa29.35■■■□□ 2.29
GSDMD-206ENST00000526406 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
GSDMD-206ENST00000526406 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
GSDMD-206ENST00000526406 WIZO95785 1651 aa29.12■■■□□ 2.25
GSDMD-206ENST00000526406 PPARGC1BQ86YN6 1023 aaKnown RBP28.97■■■□□ 2.23
GSDMD-206ENST00000526406 FAM9AQ8IZU1 332 aaPredicted RBP28.97■■■□□ 2.23
GSDMD-206ENST00000526406 TRIM26Q12899 539 aaPredicted RBP28.95■■■□□ 2.23
GSDMD-206ENST00000526406 UNC13AQ9UPW8 1703 aa28.93■■■□□ 2.22
GSDMD-206ENST00000526406 EHMT2Q96KQ7 1210 aa28.86■■■□□ 2.21
GSDMD-206ENST00000526406 BAZ1AQ9NRL2 1556 aaPredicted RBP28.85■■■□□ 2.21
GSDMD-206ENST00000526406 PABPN1Q86U42 306 aaKnown RBP eCLIP28.85■■■□□ 2.215e-7■■■■■ 27.2
GSDMD-206ENST00000526406 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
GSDMD-206ENST00000526406 BICRAQ9NZM4 1560 aa28.57■■■□□ 2.16
GSDMD-206ENST00000526406 TOP2AP11388 1531 aaKnown RBP28.55■■■□□ 2.16
GSDMD-206ENST00000526406 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
GSDMD-206ENST00000526406 EIF4G1Q04637 1599 aaKnown RBP28.47■■■□□ 2.15
GSDMD-206ENST00000526406 SMARCA2P51531 1590 aa28.42■■■□□ 2.14
GSDMD-206ENST00000526406 ABCC8Q09428 1581 aa28.4■■■□□ 2.14
GSDMD-206ENST00000526406 ZEB1P37275 1124 aaPredicted RBP28.3■■■□□ 2.12
GSDMD-206ENST00000526406 SOGA1O94964 1423 aa28.06■■■□□ 2.08
GSDMD-206ENST00000526406 PEG3Q9GZU2 1588 aa28.05■■■□□ 2.08
GSDMD-206ENST00000526406 ATAD2BQ9ULI0 1458 aa28.04■■■□□ 2.08
GSDMD-206ENST00000526406 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
GSDMD-206ENST00000526406 BAZ1BQ9UIG0 1483 aaKnown RBP27.97■■■□□ 2.07
GSDMD-206ENST00000526406 CEP162Q5TB80 1403 aa27.88■■■□□ 2.05
GSDMD-206ENST00000526406 WRNQ14191 1432 aaPredicted RBP eCLIP27.87■■■□□ 2.05
GSDMD-206ENST00000526406 CSRNP3Q8WYN3 585 aa27.84■■■□□ 2.05
GSDMD-206ENST00000526406 TNIKQ9UKE5 1360 aa27.83■■■□□ 2.04
GSDMD-206ENST00000526406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.82■■■□□ 2.04
GSDMD-206ENST00000526406 TTBK1Q5TCY1 1321 aaPredicted RBP27.81■■■□□ 2.04
GSDMD-206ENST00000526406 EEA1Q15075 1411 aa27.81■■■□□ 2.04
GSDMD-206ENST00000526406 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
GSDMD-206ENST00000526406 UBTFP17480 764 aaKnown RBP27.77■■■□□ 2.04
GSDMD-206ENST00000526406 CCER1Q8TC90 406 aaPredicted RBP27.73■■■□□ 2.03
GSDMD-206ENST00000526406 GOLGA3Q08378 1498 aa27.64■■■□□ 2.02
GSDMD-206ENST00000526406 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
GSDMD-206ENST00000526406 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
GSDMD-206ENST00000526406 RANGAP1P46060 587 aaPredicted RBP27.48■■□□□ 1.99
GSDMD-206ENST00000526406 HMGXB3Q12766 1538 aa27.44■■□□□ 1.98
GSDMD-206ENST00000526406 KIF21BO75037 1637 aa27.43■■□□□ 1.98
GSDMD-206ENST00000526406 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
GSDMD-206ENST00000526406 RAPGEF2Q9Y4G8 1499 aa27.36■■□□□ 1.97
GSDMD-206ENST00000526406 CLIP1P30622 1438 aa27.35■■□□□ 1.97
GSDMD-206ENST00000526406 BIVM-ERCC5R4GMW8 1640 aa27.26■■□□□ 1.95
GSDMD-206ENST00000526406 SCAF1Q9H7N4 1312 aaKnown RBP27.26■■□□□ 1.95
GSDMD-206ENST00000526406 CUX1P39880 1505 aa27.25■■□□□ 1.95
GSDMD-206ENST00000526406 VPS8Q8N3P4 1428 aa27.23■■□□□ 1.95
GSDMD-206ENST00000526406 CFTRP13569 1480 aa27.22■■□□□ 1.95
GSDMD-206ENST00000526406 DIEXFQ68CQ4 756 aaKnown RBP27.21■■□□□ 1.95
GSDMD-206ENST00000526406 HNRNPUL2Q1KMD3 747 aaKnown RBP27.16■■□□□ 1.94
GSDMD-206ENST00000526406 APLP2Q06481 763 aa27.12■■□□□ 1.93
GSDMD-206ENST00000526406 CC2D2AQ9P2K1 1620 aa27.07■■□□□ 1.92
GSDMD-206ENST00000526406 PRXQ9BXM0 1461 aa27.03■■□□□ 1.92
GSDMD-206ENST00000526406 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
GSDMD-206ENST00000526406 CADPSQ9ULU8 1353 aa27■■□□□ 1.91
GSDMD-206ENST00000526406 ZNF316A6NFI3 1004 aaPredicted RBP26.99■■□□□ 1.91
GSDMD-206ENST00000526406 ERICH3Q5RHP9 1530 aa26.99■■□□□ 1.91
GSDMD-206ENST00000526406 ACIN1Q9UKV3 1341 aaKnown RBP26.99■■□□□ 1.91
GSDMD-206ENST00000526406 NEUROD1Q13562 356 aa26.97■■□□□ 1.91
GSDMD-206ENST00000526406 PRDM2Q13029 1718 aa26.91■■□□□ 1.9
GSDMD-206ENST00000526406 ARAP1Q96P48 1450 aa26.9■■□□□ 1.9
GSDMD-206ENST00000526406 CUX2O14529 1486 aa26.89■■□□□ 1.89
GSDMD-206ENST00000526406 FGD5Q6ZNL6 1462 aa26.83■■□□□ 1.89
GSDMD-206ENST00000526406 CENPBP07199 599 aaPredicted RBP26.81■■□□□ 1.88
GSDMD-206ENST00000526406 KANK4Q5T7N3 995 aaPredicted RBP26.81■■□□□ 1.88
GSDMD-206ENST00000526406 NESP48681 1621 aa26.79■■□□□ 1.88
GSDMD-206ENST00000526406 IGF1RP08069 1367 aa26.78■■□□□ 1.88
GSDMD-206ENST00000526406 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
GSDMD-206ENST00000526406 DNAJC5BQ9UF47 199 aa26.7■■□□□ 1.86
GSDMD-206ENST00000526406 ARHGAP35Q9NRY4 1499 aa26.69■■□□□ 1.86
GSDMD-206ENST00000526406 GTF3C3Q9Y5Q9 886 aa26.69■■□□□ 1.86
GSDMD-206ENST00000526406 CARMIL1Q5VZK9 1371 aa26.67■■□□□ 1.86
GSDMD-206ENST00000526406 RAD54L2Q9Y4B4 1467 aa26.66■■□□□ 1.86
GSDMD-206ENST00000526406 MIER1Q8N108 512 aa26.63■■□□□ 1.85
GSDMD-206ENST00000526406 PELP1Q8IZL8 1130 aaKnown RBP26.62■■□□□ 1.85
GSDMD-206ENST00000526406 DHX57Q6P158 1386 aaKnown RBP26.62■■□□□ 1.85
GSDMD-206ENST00000526406 RRBP1Q9P2E9 1410 aaKnown RBP26.6■■□□□ 1.85
GSDMD-206ENST00000526406 P3H3Q8IVL6 736 aa26.58■■□□□ 1.85
GSDMD-206ENST00000526406 CLSPNQ9HAW4 1339 aa26.58■■□□□ 1.84
GSDMD-206ENST00000526406 YTHDC1Q96MU7 727 aaKnown RBP26.57■■□□□ 1.84
GSDMD-206ENST00000526406 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
GSDMD-206ENST00000526406 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
GSDMD-206ENST00000526406 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms