RNA–Protein interactions for RNA: ENST00000254584.6

ARFIP2-201, Transcript of ADP ribosylation factor interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFIP2, Length 2,543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP2-201ENST00000254584 NISCHQ9Y2I1 1504 aa37.99■■■■□ 3.67
ARFIP2-201ENST00000254584 CCDC180Q9P1Z9 1646 aa32.46■■■□□ 2.79
ARFIP2-201ENST00000254584 ZCCHC6Q5VYS8 1495 aaKnown RBP32.13■■■□□ 2.73
ARFIP2-201ENST00000254584 SHROOM4Q9ULL8 1493 aa32.13■■■□□ 2.73
ARFIP2-201ENST00000254584 SUPT5HO00267 1087 aaKnown RBP31.4■■■□□ 2.62
ARFIP2-201ENST00000254584 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
ARFIP2-201ENST00000254584 DCAF1Q9Y4B6 1507 aa31.22■■■□□ 2.59
ARFIP2-201ENST00000254584 CHIC1Q5VXU3 224 aa30.5■■■□□ 2.47
ARFIP2-201ENST00000254584 MYO15BQ96JP2 1530 aa30.4■■■□□ 2.46
ARFIP2-201ENST00000254584 SCRIBQ14160 1630 aa30.31■■■□□ 2.44
ARFIP2-201ENST00000254584 ABCC9O60706 1549 aa30.3■■■□□ 2.44
ARFIP2-201ENST00000254584 NACADO15069 1562 aa30■■■□□ 2.39
ARFIP2-201ENST00000254584 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
ARFIP2-201ENST00000254584 RB1CC1Q8TDY2 1594 aa29.66■■■□□ 2.34
ARFIP2-201ENST00000254584 CECR2Q9BXF3 1484 aa29.61■■■□□ 2.33
ARFIP2-201ENST00000254584 LOC105371045A0A1W2PR82 267 aa29.54■■■□□ 2.32
ARFIP2-201ENST00000254584 MROH2BQ7Z745 1585 aa29.51■■■□□ 2.32
ARFIP2-201ENST00000254584 WIZO95785 1651 aa29.35■■■□□ 2.29
ARFIP2-201ENST00000254584 PCGF6Q9BYE7 350 aa29.32■■■□□ 2.28
ARFIP2-201ENST00000254584 TRIM41Q8WV44 630 aa29.29■■■□□ 2.28
ARFIP2-201ENST00000254584 HRCP23327 699 aa29.25■■■□□ 2.27
ARFIP2-201ENST00000254584 BAZ1AQ9NRL2 1556 aaPredicted RBP29.2■■■□□ 2.26
ARFIP2-201ENST00000254584 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.26
ARFIP2-201ENST00000254584 FAM9AQ8IZU1 332 aaPredicted RBP29■■■□□ 2.23
ARFIP2-201ENST00000254584 SMARCA4P51532 1647 aa28.99■■■□□ 2.23
ARFIP2-201ENST00000254584 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
ARFIP2-201ENST00000254584 TOP2AP11388 1531 aaKnown RBP28.92■■■□□ 2.22
ARFIP2-201ENST00000254584 TRIM26Q12899 539 aaPredicted RBP28.84■■■□□ 2.21
ARFIP2-201ENST00000254584 BICRAQ9NZM4 1560 aa28.76■■■□□ 2.19
ARFIP2-201ENST00000254584 SMARCA2P51531 1590 aa28.76■■■□□ 2.19
ARFIP2-201ENST00000254584 CCDC88BA6NC98 1476 aa28.75■■■□□ 2.19
ARFIP2-201ENST00000254584 EHMT2Q96KQ7 1210 aa28.71■■■□□ 2.19
ARFIP2-201ENST00000254584 PABPN1Q86U42 306 aaKnown RBP eCLIP28.67■■■□□ 2.18
ARFIP2-201ENST00000254584 PPARGC1BQ86YN6 1023 aaKnown RBP28.64■■■□□ 2.17
ARFIP2-201ENST00000254584 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
ARFIP2-201ENST00000254584 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
ARFIP2-201ENST00000254584 SOGA1O94964 1423 aa28.29■■■□□ 2.12
ARFIP2-201ENST00000254584 ATAD2BQ9ULI0 1458 aa28.25■■■□□ 2.11
ARFIP2-201ENST00000254584 RUSC2Q8N2Y8 1516 aa28.16■■■□□ 2.1
ARFIP2-201ENST00000254584 BAZ1BQ9UIG0 1483 aaKnown RBP28.16■■■□□ 2.1
ARFIP2-201ENST00000254584 EEA1Q15075 1411 aa28.15■■■□□ 2.1
ARFIP2-201ENST00000254584 WRNQ14191 1432 aaPredicted RBP eCLIP28.15■■■□□ 2.1
ARFIP2-201ENST00000254584 ZEB1P37275 1124 aaPredicted RBP28.12■■■□□ 2.09
ARFIP2-201ENST00000254584 CEP162Q5TB80 1403 aa28.09■■■□□ 2.09
ARFIP2-201ENST00000254584 CSRNP3Q8WYN3 585 aa28.08■■■□□ 2.08
ARFIP2-201ENST00000254584 SYNJ1O43426 1573 aa28.06■■■□□ 2.08
ARFIP2-201ENST00000254584 TNIKQ9UKE5 1360 aa28.06■■■□□ 2.08
ARFIP2-201ENST00000254584 GOLGA3Q08378 1498 aa27.95■■■□□ 2.06
ARFIP2-201ENST00000254584 UBTFP17480 764 aaKnown RBP27.9■■■□□ 2.06
ARFIP2-201ENST00000254584 KIF21BO75037 1637 aa27.82■■■□□ 2.04
ARFIP2-201ENST00000254584 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
ARFIP2-201ENST00000254584 TTBK1Q5TCY1 1321 aaPredicted RBP27.77■■■□□ 2.04
ARFIP2-201ENST00000254584 HMGXB3Q12766 1538 aa27.76■■■□□ 2.03
ARFIP2-201ENST00000254584 NCAPD3P42695 1498 aa27.74■■■□□ 2.03
ARFIP2-201ENST00000254584 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
ARFIP2-201ENST00000254584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.71■■■□□ 2.03
ARFIP2-201ENST00000254584 BIVM-ERCC5R4GMW8 1640 aa27.67■■■□□ 2.02
ARFIP2-201ENST00000254584 RAPGEF2Q9Y4G8 1499 aa27.63■■■□□ 2.01
ARFIP2-201ENST00000254584 CCER1Q8TC90 406 aaPredicted RBP27.62■■■□□ 2.01
ARFIP2-201ENST00000254584 CLIP1P30622 1438 aa27.6■■■□□ 2.01
ARFIP2-201ENST00000254584 CUX1P39880 1505 aa27.5■■□□□ 1.99
ARFIP2-201ENST00000254584 VPS8Q8N3P4 1428 aa27.47■■□□□ 1.99
ARFIP2-201ENST00000254584 CFTRP13569 1480 aa27.47■■□□□ 1.99
ARFIP2-201ENST00000254584 PRXQ9BXM0 1461 aa27.4■■□□□ 1.98
ARFIP2-201ENST00000254584 ERICH3Q5RHP9 1530 aa27.4■■□□□ 1.98
ARFIP2-201ENST00000254584 RANGAP1P46060 587 aaPredicted RBP27.35■■□□□ 1.97
ARFIP2-201ENST00000254584 PRDM2Q13029 1718 aa27.32■■□□□ 1.96
ARFIP2-201ENST00000254584 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
ARFIP2-201ENST00000254584 APLP2Q06481 763 aa27.23■■□□□ 1.95
ARFIP2-201ENST00000254584 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
ARFIP2-201ENST00000254584 HNRNPUL2Q1KMD3 747 aaKnown RBP27.18■■□□□ 1.94
ARFIP2-201ENST00000254584 CADPSQ9ULU8 1353 aa27.17■■□□□ 1.94
ARFIP2-201ENST00000254584 CC2D2AQ9P2K1 1620 aa27.14■■□□□ 1.93
ARFIP2-201ENST00000254584 CUX2O14529 1486 aa27.07■■□□□ 1.92
ARFIP2-201ENST00000254584 FGD5Q6ZNL6 1462 aa27.02■■□□□ 1.92
ARFIP2-201ENST00000254584 ARHGAP35Q9NRY4 1499 aa27■■□□□ 1.91
ARFIP2-201ENST00000254584 IGF1RP08069 1367 aa26.99■■□□□ 1.91
ARFIP2-201ENST00000254584 DIEXFQ68CQ4 756 aaKnown RBP26.97■■□□□ 1.91
ARFIP2-201ENST00000254584 KANK4Q5T7N3 995 aaPredicted RBP26.96■■□□□ 1.91
ARFIP2-201ENST00000254584 FANCD2Q9BXW9 1451 aa26.92■■□□□ 1.9
ARFIP2-201ENST00000254584 CARMIL1Q5VZK9 1371 aa26.87■■□□□ 1.89
ARFIP2-201ENST00000254584 ZNF316A6NFI3 1004 aaPredicted RBP26.84■■□□□ 1.89
ARFIP2-201ENST00000254584 RRBP1Q9P2E9 1410 aaKnown RBP26.82■■□□□ 1.88
ARFIP2-201ENST00000254584 DNMBPQ6XZF7 1577 aa26.81■■□□□ 1.88
ARFIP2-201ENST00000254584 SCAF1Q9H7N4 1312 aaKnown RBP26.81■■□□□ 1.88
ARFIP2-201ENST00000254584 NESP48681 1621 aa26.78■■□□□ 1.88
ARFIP2-201ENST00000254584 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
ARFIP2-201ENST00000254584 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
ARFIP2-201ENST00000254584 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
ARFIP2-201ENST00000254584 ABCA10Q8WWZ4 1543 aa26.72■■□□□ 1.87
ARFIP2-201ENST00000254584 DHX57Q6P158 1386 aaKnown RBP26.7■■□□□ 1.87
ARFIP2-201ENST00000254584 TIAM1Q13009 1591 aa26.7■■□□□ 1.86
ARFIP2-201ENST00000254584 CCNB3Q8WWL7 1395 aa26.68■■□□□ 1.86
ARFIP2-201ENST00000254584 MAP3K1Q13233 1512 aa26.66■■□□□ 1.86
ARFIP2-201ENST00000254584 CLSPNQ9HAW4 1339 aa26.63■■□□□ 1.85
ARFIP2-201ENST00000254584 ACIN1Q9UKV3 1341 aaKnown RBP26.63■■□□□ 1.85
ARFIP2-201ENST00000254584 NEUROD1Q13562 356 aa26.61■■□□□ 1.85
ARFIP2-201ENST00000254584 LAMC3Q9Y6N6 1575 aa26.6■■□□□ 1.85
ARFIP2-201ENST00000254584 PCF11O94913 1555 aaKnown RBP26.57■■□□□ 1.84
ARFIP2-201ENST00000254584 CUL7Q14999 1698 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms