RNA–Protein interactions for RNA: ENST00000424518.5

HOTAIR-201, HOX transcript antisense RNA, humanhuman

TSL 5 BASIC

Gene HOTAIR, Length 2,421 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTAIR-201ENST00000424518 NISCHQ9Y2I1 1504 aa39.03■■■■□ 3.84
HOTAIR-201ENST00000424518 CCDC180Q9P1Z9 1646 aa33.51■■■□□ 2.95
HOTAIR-201ENST00000424518 SHROOM4Q9ULL8 1493 aa32.92■■■□□ 2.86
HOTAIR-201ENST00000424518 ZCCHC6Q5VYS8 1495 aaKnown RBP32.89■■■□□ 2.86
HOTAIR-201ENST00000424518 DCAF8L2P0C7V8 631 aa32.61■■■□□ 2.81
HOTAIR-201ENST00000424518 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.71
HOTAIR-201ENST00000424518 SUPT5HO00267 1087 aaKnown RBP31.92■■■□□ 2.7
HOTAIR-201ENST00000424518 ABCC9O60706 1549 aa31.64■■■□□ 2.66
HOTAIR-201ENST00000424518 SCRIBQ14160 1630 aa31.39■■■□□ 2.61
HOTAIR-201ENST00000424518 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
HOTAIR-201ENST00000424518 NACADO15069 1562 aa31.08■■■□□ 2.57
HOTAIR-201ENST00000424518 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
HOTAIR-201ENST00000424518 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
HOTAIR-201ENST00000424518 RSF1Q96T23 1441 aaPredicted RBP30.63■■■□□ 2.49
HOTAIR-201ENST00000424518 CECR2Q9BXF3 1484 aa30.54■■■□□ 2.48
HOTAIR-201ENST00000424518 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
HOTAIR-201ENST00000424518 MROH2BQ7Z745 1585 aa30.36■■■□□ 2.45
HOTAIR-201ENST00000424518 WIZO95785 1651 aa30.22■■■□□ 2.43
HOTAIR-201ENST00000424518 PABPN1Q86U42 306 aaKnown RBP eCLIP30.12■■■□□ 2.41
HOTAIR-201ENST00000424518 BAZ1AQ9NRL2 1556 aaPredicted RBP30.02■■■□□ 2.4
HOTAIR-201ENST00000424518 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
HOTAIR-201ENST00000424518 SMARCA4P51532 1647 aa29.9■■■□□ 2.38
HOTAIR-201ENST00000424518 LOC105371045A0A1W2PR82 267 aa29.79■■■□□ 2.36
HOTAIR-201ENST00000424518 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
HOTAIR-201ENST00000424518 TOP2AP11388 1531 aaKnown RBP29.64■■■□□ 2.34
HOTAIR-201ENST00000424518 FAM9AQ8IZU1 332 aaPredicted RBP29.55■■■□□ 2.32
HOTAIR-201ENST00000424518 CCDC88BA6NC98 1476 aa29.51■■■□□ 2.31
HOTAIR-201ENST00000424518 SMARCA2P51531 1590 aa29.5■■■□□ 2.31
HOTAIR-201ENST00000424518 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
HOTAIR-201ENST00000424518 EHMT2Q96KQ7 1210 aa29.4■■■□□ 2.3
HOTAIR-201ENST00000424518 ABCC8Q09428 1581 aa29.32■■■□□ 2.28
HOTAIR-201ENST00000424518 PEG3Q9GZU2 1588 aa29.3■■■□□ 2.28
HOTAIR-201ENST00000424518 ATAD2BQ9ULI0 1458 aa29.24■■■□□ 2.27
HOTAIR-201ENST00000424518 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
HOTAIR-201ENST00000424518 PCGF6Q9BYE7 350 aa29.1■■■□□ 2.25
HOTAIR-201ENST00000424518 SOGA1O94964 1423 aa28.85■■■□□ 2.21
HOTAIR-201ENST00000424518 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
HOTAIR-201ENST00000424518 RUSC2Q8N2Y8 1516 aa28.78■■■□□ 2.2
HOTAIR-201ENST00000424518 SYNJ1O43426 1573 aa28.76■■■□□ 2.19
HOTAIR-201ENST00000424518 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
HOTAIR-201ENST00000424518 HMGXB3Q12766 1538 aa28.72■■■□□ 2.19
HOTAIR-201ENST00000424518 TRIM26Q12899 539 aaPredicted RBP28.6■■■□□ 2.17
HOTAIR-201ENST00000424518 PPARGC1BQ86YN6 1023 aaKnown RBP28.57■■■□□ 2.16
HOTAIR-201ENST00000424518 HRCP23327 699 aa28.55■■■□□ 2.16
HOTAIR-201ENST00000424518 CSRNP3Q8WYN3 585 aa28.54■■■□□ 2.16
HOTAIR-201ENST00000424518 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
HOTAIR-201ENST00000424518 EEA1Q15075 1411 aa28.45■■■□□ 2.14
HOTAIR-201ENST00000424518 UBTFP17480 764 aaKnown RBP28.43■■■□□ 2.14
HOTAIR-201ENST00000424518 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
HOTAIR-201ENST00000424518 CEP162Q5TB80 1403 aa28.38■■■□□ 2.13
HOTAIR-201ENST00000424518 CFTRP13569 1480 aa28.36■■■□□ 2.13
HOTAIR-201ENST00000424518 BIVM-ERCC5R4GMW8 1640 aa28.33■■■□□ 2.13
HOTAIR-201ENST00000424518 TNIKQ9UKE5 1360 aa28.31■■■□□ 2.12
HOTAIR-201ENST00000424518 GOLGA3Q08378 1498 aa28.31■■■□□ 2.12
HOTAIR-201ENST00000424518 CUX1P39880 1505 aa28.3■■■□□ 2.12
HOTAIR-201ENST00000424518 TTBK1Q5TCY1 1321 aaPredicted RBP28.27■■■□□ 2.12
HOTAIR-201ENST00000424518 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
HOTAIR-201ENST00000424518 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
HOTAIR-201ENST00000424518 KIF21BO75037 1637 aa28.2■■■□□ 2.1
HOTAIR-201ENST00000424518 RAPGEF2Q9Y4G8 1499 aa28.18■■■□□ 2.1
HOTAIR-201ENST00000424518 CADPSQ9ULU8 1353 aa28.16■■■□□ 2.1
HOTAIR-201ENST00000424518 RANGAP1P46060 587 aaPredicted RBP28.16■■■□□ 2.1
HOTAIR-201ENST00000424518 NESP48681 1621 aa28.02■■■□□ 2.08
HOTAIR-201ENST00000424518 DNAJC5BQ9UF47 199 aa28.01■■■□□ 2.07
HOTAIR-201ENST00000424518 CLIP1P30622 1438 aa27.98■■■□□ 2.07
HOTAIR-201ENST00000424518 FANCD2Q9BXW9 1451 aa27.94■■■□□ 2.06
HOTAIR-201ENST00000424518 KIF27Q86VH2 1401 aa27.93■■■□□ 2.06
HOTAIR-201ENST00000424518 PRXQ9BXM0 1461 aa27.91■■■□□ 2.06
HOTAIR-201ENST00000424518 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.06
HOTAIR-201ENST00000424518 CUX2O14529 1486 aa27.86■■■□□ 2.05
HOTAIR-201ENST00000424518 ERICH3Q5RHP9 1530 aa27.83■■■□□ 2.05
HOTAIR-201ENST00000424518 VPS8Q8N3P4 1428 aa27.75■■■□□ 2.03
HOTAIR-201ENST00000424518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.72■■■□□ 2.03
HOTAIR-201ENST00000424518 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
HOTAIR-201ENST00000424518 IGF1RP08069 1367 aa27.7■■■□□ 2.02
HOTAIR-201ENST00000424518 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
HOTAIR-201ENST00000424518 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
HOTAIR-201ENST00000424518 LAMC3Q9Y6N6 1575 aa27.67■■■□□ 2.02
HOTAIR-201ENST00000424518 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.02
HOTAIR-201ENST00000424518 ARAP1Q96P48 1450 aa27.63■■■□□ 2.01
HOTAIR-201ENST00000424518 URB2Q14146 1524 aaKnown RBP27.59■■■□□ 2.01
HOTAIR-201ENST00000424518 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
HOTAIR-201ENST00000424518 APLP2Q06481 763 aa27.58■■■□□ 2.01
HOTAIR-201ENST00000424518 CARMIL1Q5VZK9 1371 aa27.58■■■□□ 2
HOTAIR-201ENST00000424518 ZEB1P37275 1124 aaPredicted RBP27.57■■■□□ 2
HOTAIR-201ENST00000424518 CCER1Q8TC90 406 aaPredicted RBP27.53■■■□□ 2
HOTAIR-201ENST00000424518 ARHGAP35Q9NRY4 1499 aa27.5■■□□□ 1.99
HOTAIR-201ENST00000424518 ABCA10Q8WWZ4 1543 aa27.5■■□□□ 1.99
HOTAIR-201ENST00000424518 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
HOTAIR-201ENST00000424518 HNRNPUL2Q1KMD3 747 aaKnown RBP27.44■■□□□ 1.98
HOTAIR-201ENST00000424518 KANK4Q5T7N3 995 aaPredicted RBP27.41■■□□□ 1.98
HOTAIR-201ENST00000424518 TDRD9Q8NDG6 1382 aaKnown RBP27.4■■□□□ 1.98
HOTAIR-201ENST00000424518 WDR97A6NE52 1622 aa27.4■■□□□ 1.98
HOTAIR-201ENST00000424518 P3H3Q8IVL6 736 aa27.35■■□□□ 1.97
HOTAIR-201ENST00000424518 CUL7Q14999 1698 aa27.27■■□□□ 1.96
HOTAIR-201ENST00000424518 ABCA5Q8WWZ7 1642 aa27.27■■□□□ 1.96
HOTAIR-201ENST00000424518 GAPVD1Q14C86 1478 aa27.24■■□□□ 1.95
HOTAIR-201ENST00000424518 CTTNBP2Q8WZ74 1663 aa27.21■■□□□ 1.95
HOTAIR-201ENST00000424518 TARBP1Q13395 1621 aaKnown RBP27.2■■□□□ 1.94
HOTAIR-201ENST00000424518 FHOD3Q2V2M9 1422 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms