Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VGLL3A8MV65 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.86■□□□□ 0.45
VGLL3A8MV65 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VGLL3A8MV65 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
VGLL3A8MV65 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.86■□□□□ 0.45
VGLL3A8MV65 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.86■□□□□ 0.45
VGLL3A8MV65 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.86■□□□□ 0.45
VGLL3A8MV65 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.86■□□□□ 0.45
VGLL3A8MV65 PTENP1-202ENST00000532280 3996 ntBASIC17.86■□□□□ 0.45
VGLL3A8MV65 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VGLL3A8MV65 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.86■□□□□ 0.45
VGLL3A8MV65 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VGLL3A8MV65 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
VGLL3A8MV65 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VGLL3A8MV65 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.84■□□□□ 0.45
VGLL3A8MV65 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.84■□□□□ 0.45
VGLL3A8MV65 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VGLL3A8MV65 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.84■□□□□ 0.45
VGLL3A8MV65 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VGLL3A8MV65 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VGLL3A8MV65 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VGLL3A8MV65 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VGLL3A8MV65 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VGLL3A8MV65 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VGLL3A8MV65 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.84■□□□□ 0.45
VGLL3A8MV65 OR2I1P-207ENST00000453522 948 ntBASIC17.84■□□□□ 0.45
VGLL3A8MV65 AC008764.7-201ENST00000593779 1081 ntBASIC17.84■□□□□ 0.45
VGLL3A8MV65 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.84■□□□□ 0.45
VGLL3A8MV65 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.84■□□□□ 0.45
VGLL3A8MV65 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VGLL3A8MV65 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VGLL3A8MV65 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VGLL3A8MV65 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VGLL3A8MV65 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VGLL3A8MV65 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VGLL3A8MV65 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
VGLL3A8MV65 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VGLL3A8MV65 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.83■□□□□ 0.45
VGLL3A8MV65 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VGLL3A8MV65 AL162741.1-201ENST00000565563 1558 ntBASIC17.83■□□□□ 0.45
VGLL3A8MV65 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VGLL3A8MV65 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VGLL3A8MV65 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VGLL3A8MV65 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
VGLL3A8MV65 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VGLL3A8MV65 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.83■□□□□ 0.44
VGLL3A8MV65 AC099791.1-201ENST00000416440 715 ntBASIC17.83■□□□□ 0.44
VGLL3A8MV65 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.83■□□□□ 0.44
VGLL3A8MV65 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.83■□□□□ 0.44
VGLL3A8MV65 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VGLL3A8MV65 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VGLL3A8MV65 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VGLL3A8MV65 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
VGLL3A8MV65 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.83■□□□□ 0.44
VGLL3A8MV65 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VGLL3A8MV65 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.83■□□□□ 0.44
VGLL3A8MV65 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.83■□□□□ 0.44
VGLL3A8MV65 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VGLL3A8MV65 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VGLL3A8MV65 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
VGLL3A8MV65 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VGLL3A8MV65 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VGLL3A8MV65 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VGLL3A8MV65 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VGLL3A8MV65 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms