Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.07■□□□□ 0.32
AP3D1O14617 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
AP3D1O14617 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.07■□□□□ 0.32
AP3D1O14617 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3D1O14617 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3D1O14617 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AP3D1O14617 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
AP3D1O14617 MIR1238-201ENST00000408483 83 ntBASIC17.07■□□□□ 0.32
AP3D1O14617 MIR4497-201ENST00000583208 89 ntBASIC17.07■□□□□ 0.32
AP3D1O14617 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.07■□□□□ 0.32
AP3D1O14617 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
AP3D1O14617 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
AP3D1O14617 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.07■□□□□ 0.32
AP3D1O14617 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
AP3D1O14617 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3D1O14617 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3D1O14617 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3D1O14617 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
AP3D1O14617 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3D1O14617 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3D1O14617 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3D1O14617 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3D1O14617 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
AP3D1O14617 CA15P1-201ENST00000481698 905 ntBASIC17.06■□□□□ 0.32
AP3D1O14617 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3D1O14617 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.06■□□□□ 0.32
AP3D1O14617 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3D1O14617 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3D1O14617 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
AP3D1O14617 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
AP3D1O14617 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3D1O14617 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3D1O14617 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
AP3D1O14617 AC009053.2-201ENST00000563701 2365 ntBASIC17.06■□□□□ 0.32
AP3D1O14617 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
AP3D1O14617 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3D1O14617 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
AP3D1O14617 AC135776.1-201ENST00000319817 2481 ntBASIC17.05■□□□□ 0.32
AP3D1O14617 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 KRT17P2-201ENST00000300992 1314 ntBASIC17.05■□□□□ 0.32
AP3D1O14617 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3D1O14617 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
AP3D1O14617 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3D1O14617 MCCD1P1-208ENST00000445732 328 ntBASIC17.05■□□□□ 0.32
AP3D1O14617 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 KRT18P41-201ENST00000518924 1277 ntBASIC17.05■□□□□ 0.32
AP3D1O14617 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.05■□□□□ 0.32
AP3D1O14617 FITM1-202ENST00000559294 800 ntBASIC17.05■□□□□ 0.32
AP3D1O14617 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3D1O14617 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
AP3D1O14617 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3D1O14617 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
AP3D1O14617 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms