RNA–Protein interactions for RNA: ENST00000563701.1

AC009053.2-201, humanhuman

BASIC

Gene AC009053.2, Length 2,365 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009053.2-201ENST00000563701 NISCHQ9Y2I1 1504 aa37.23■■■■□ 3.55
AC009053.2-201ENST00000563701 CCDC180Q9P1Z9 1646 aa32.32■■■□□ 2.76
AC009053.2-201ENST00000563701 ZCCHC6Q5VYS8 1495 aaKnown RBP31.2■■■□□ 2.58
AC009053.2-201ENST00000563701 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
AC009053.2-201ENST00000563701 ABCC9O60706 1549 aa31.14■■■□□ 2.58
AC009053.2-201ENST00000563701 DCAF1Q9Y4B6 1507 aa30.59■■■□□ 2.49
AC009053.2-201ENST00000563701 SHROOM4Q9ULL8 1493 aa30.58■■■□□ 2.49
AC009053.2-201ENST00000563701 MYO15BQ96JP2 1530 aa30.26■■■□□ 2.43
AC009053.2-201ENST00000563701 NACADO15069 1562 aa30.23■■■□□ 2.43
AC009053.2-201ENST00000563701 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
AC009053.2-201ENST00000563701 SCRIBQ14160 1630 aa29.99■■■□□ 2.39
AC009053.2-201ENST00000563701 SUPT5HO00267 1087 aaKnown RBP29.55■■■□□ 2.32
AC009053.2-201ENST00000563701 UNC13AQ9UPW8 1703 aa29.52■■■□□ 2.32
AC009053.2-201ENST00000563701 PABPN1Q86U42 306 aaKnown RBP eCLIP29.49■■■□□ 2.31
AC009053.2-201ENST00000563701 HRCP23327 699 aa29.47■■■□□ 2.31
AC009053.2-201ENST00000563701 BICRAQ9NZM4 1560 aa29.3■■■□□ 2.28
AC009053.2-201ENST00000563701 CECR2Q9BXF3 1484 aa29.15■■■□□ 2.26
AC009053.2-201ENST00000563701 CHIC1Q5VXU3 224 aa29.09■■■□□ 2.25
AC009053.2-201ENST00000563701 PCGF6Q9BYE7 350 aa28.95■■■□□ 2.22
AC009053.2-201ENST00000563701 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
AC009053.2-201ENST00000563701 MROH2BQ7Z745 1585 aa28.87■■■□□ 2.21
AC009053.2-201ENST00000563701 PPARGC1BQ86YN6 1023 aaKnown RBP28.77■■■□□ 2.2
AC009053.2-201ENST00000563701 BAZ1AQ9NRL2 1556 aaPredicted RBP28.67■■■□□ 2.18
AC009053.2-201ENST00000563701 SMARCA4P51532 1647 aa28.63■■■□□ 2.17
AC009053.2-201ENST00000563701 WIZO95785 1651 aa28.6■■■□□ 2.17
AC009053.2-201ENST00000563701 EIF4G1Q04637 1599 aaKnown RBP28.38■■■□□ 2.13
AC009053.2-201ENST00000563701 ATAD2BQ9ULI0 1458 aa28.28■■■□□ 2.12
AC009053.2-201ENST00000563701 LOC105371045A0A1W2PR82 267 aa28.28■■■□□ 2.12
AC009053.2-201ENST00000563701 PEG3Q9GZU2 1588 aa28.19■■■□□ 2.1
AC009053.2-201ENST00000563701 TRIM26Q12899 539 aaPredicted RBP28.18■■■□□ 2.1
AC009053.2-201ENST00000563701 TOP2AP11388 1531 aaKnown RBP28.16■■■□□ 2.1
AC009053.2-201ENST00000563701 SMARCA2P51531 1590 aa28.1■■■□□ 2.09
AC009053.2-201ENST00000563701 BAZ1BQ9UIG0 1483 aaKnown RBP28.06■■■□□ 2.08
AC009053.2-201ENST00000563701 CC2D2AQ9P2K1 1620 aa28.05■■■□□ 2.08
AC009053.2-201ENST00000563701 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
AC009053.2-201ENST00000563701 NCAPD3P42695 1498 aa28.01■■■□□ 2.07
AC009053.2-201ENST00000563701 PELP1Q8IZL8 1130 aaKnown RBP27.99■■■□□ 2.07
AC009053.2-201ENST00000563701 DNAJC5BQ9UF47 199 aa27.88■■■□□ 2.05
AC009053.2-201ENST00000563701 ZEB1P37275 1124 aaPredicted RBP27.86■■■□□ 2.05
AC009053.2-201ENST00000563701 HMGXB3Q12766 1538 aa27.84■■■□□ 2.05
AC009053.2-201ENST00000563701 SCAF1Q9H7N4 1312 aaKnown RBP27.65■■■□□ 2.02
AC009053.2-201ENST00000563701 TRIM41Q8WV44 630 aa27.43■■□□□ 1.98
AC009053.2-201ENST00000563701 ABCC8Q09428 1581 aa27.42■■□□□ 1.98
AC009053.2-201ENST00000563701 CFTRP13569 1480 aa27.35■■□□□ 1.97
AC009053.2-201ENST00000563701 CADPSQ9ULU8 1353 aa27.33■■□□□ 1.97
AC009053.2-201ENST00000563701 NESP48681 1621 aa27.32■■□□□ 1.96
AC009053.2-201ENST00000563701 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
AC009053.2-201ENST00000563701 WRNQ14191 1432 aaPredicted RBP eCLIP27.15■■□□□ 1.94
AC009053.2-201ENST00000563701 ACIN1Q9UKV3 1341 aaKnown RBP27.09■■□□□ 1.93
AC009053.2-201ENST00000563701 SYNJ1O43426 1573 aa27.08■■□□□ 1.93
AC009053.2-201ENST00000563701 EHMT2Q96KQ7 1210 aa27.06■■□□□ 1.92
AC009053.2-201ENST00000563701 FANCD2Q9BXW9 1451 aa27.03■■□□□ 1.92
AC009053.2-201ENST00000563701 NEUROD1Q13562 356 aa27.01■■□□□ 1.91
AC009053.2-201ENST00000563701 LAMC3Q9Y6N6 1575 aa26.99■■□□□ 1.91
AC009053.2-201ENST00000563701 MYT1Q01538 1121 aa26.99■■□□□ 1.91
AC009053.2-201ENST00000563701 PRDM2Q13029 1718 aa26.97■■□□□ 1.91
AC009053.2-201ENST00000563701 CUX1P39880 1505 aa26.97■■□□□ 1.91
AC009053.2-201ENST00000563701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.95■■□□□ 1.9
AC009053.2-201ENST00000563701 SOGA1O94964 1423 aa26.91■■□□□ 1.9
AC009053.2-201ENST00000563701 CCER1Q8TC90 406 aaPredicted RBP26.89■■□□□ 1.9
AC009053.2-201ENST00000563701 RUSC2Q8N2Y8 1516 aa26.88■■□□□ 1.89
AC009053.2-201ENST00000563701 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
AC009053.2-201ENST00000563701 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
AC009053.2-201ENST00000563701 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
AC009053.2-201ENST00000563701 GTF3C3Q9Y5Q9 886 aa26.8■■□□□ 1.88
AC009053.2-201ENST00000563701 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
AC009053.2-201ENST00000563701 BIVM-ERCC5R4GMW8 1640 aa26.8■■□□□ 1.88
AC009053.2-201ENST00000563701 DIEXFQ68CQ4 756 aaKnown RBP26.79■■□□□ 1.88
AC009053.2-201ENST00000563701 CENPBP07199 599 aaPredicted RBP26.78■■□□□ 1.88
AC009053.2-201ENST00000563701 URB2Q14146 1524 aaKnown RBP26.76■■□□□ 1.87
AC009053.2-201ENST00000563701 TOPBP1Q92547 1522 aa26.71■■□□□ 1.87
AC009053.2-201ENST00000563701 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
AC009053.2-201ENST00000563701 DNMBPQ6XZF7 1577 aa26.65■■□□□ 1.86
AC009053.2-201ENST00000563701 RAD54L2Q9Y4B4 1467 aa26.63■■□□□ 1.85
AC009053.2-201ENST00000563701 CSRNP3Q8WYN3 585 aa26.62■■□□□ 1.85
AC009053.2-201ENST00000563701 ERCC6Q03468 1493 aa26.59■■□□□ 1.85
AC009053.2-201ENST00000563701 POLA1P09884 1462 aaPredicted RBP26.59■■□□□ 1.85
AC009053.2-201ENST00000563701 MRC2Q9UBG0 1479 aa26.54■■□□□ 1.84
AC009053.2-201ENST00000563701 CUX2O14529 1486 aa26.5■■□□□ 1.83
AC009053.2-201ENST00000563701 EEA1Q15075 1411 aa26.48■■□□□ 1.83
AC009053.2-201ENST00000563701 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
AC009053.2-201ENST00000563701 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
AC009053.2-201ENST00000563701 CEP162Q5TB80 1403 aa26.4■■□□□ 1.82
AC009053.2-201ENST00000563701 TTBK1Q5TCY1 1321 aaPredicted RBP26.39■■□□□ 1.82
AC009053.2-201ENST00000563701 ZNF316A6NFI3 1004 aaPredicted RBP26.39■■□□□ 1.81
AC009053.2-201ENST00000563701 WDR62O43379 1518 aa26.38■■□□□ 1.81
AC009053.2-201ENST00000563701 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
AC009053.2-201ENST00000563701 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
AC009053.2-201ENST00000563701 IGF1RP08069 1367 aa26.36■■□□□ 1.81
AC009053.2-201ENST00000563701 RAPGEF2Q9Y4G8 1499 aa26.31■■□□□ 1.8
AC009053.2-201ENST00000563701 UBTFP17480 764 aaKnown RBP26.31■■□□□ 1.8
AC009053.2-201ENST00000563701 TARBP1Q13395 1621 aaKnown RBP26.29■■□□□ 1.8
AC009053.2-201ENST00000563701 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
AC009053.2-201ENST00000563701 AQRO60306 1485 aaKnown RBP eCLIP26.25■■□□□ 1.79
AC009053.2-201ENST00000563701 PRXQ9BXM0 1461 aa26.25■■□□□ 1.79
AC009053.2-201ENST00000563701 ZNF608Q9ULD9 1512 aaPredicted RBP26.24■■□□□ 1.79
AC009053.2-201ENST00000563701 WDR97A6NE52 1622 aa26.23■■□□□ 1.79
AC009053.2-201ENST00000563701 YTHDC1Q96MU7 727 aaKnown RBP26.23■■□□□ 1.79
AC009053.2-201ENST00000563701 GOLGA3Q08378 1498 aa26.22■■□□□ 1.79
AC009053.2-201ENST00000563701 KIF21BO75037 1637 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms