RNA–Protein interactions for RNA: ENST00000322347.10

COX5A-201, Transcript of cytochrome c oxidase subunit 5A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX5A, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX5A-201ENST00000322347 NISCHQ9Y2I1 1504 aa47.03■■■■■ 5.12
COX5A-201ENST00000322347 CCDC180Q9P1Z9 1646 aa41.92■■■■■ 4.3
COX5A-201ENST00000322347 ABCC9O60706 1549 aa41.42■■■■■ 4.22
COX5A-201ENST00000322347 RB1CC1Q8TDY2 1594 aa39.65■■■■□ 3.94
COX5A-201ENST00000322347 NACADO15069 1562 aa39.52■■■■□ 3.92
COX5A-201ENST00000322347 DCAF8L2P0C7V8 631 aa39.5■■■■□ 3.91
COX5A-201ENST00000322347 MYO15BQ96JP2 1530 aa39.16■■■■□ 3.86
COX5A-201ENST00000322347 ZCCHC6Q5VYS8 1495 aaKnown RBP39.09■■■■□ 3.85
COX5A-201ENST00000322347 DCAF1Q9Y4B6 1507 aa38.87■■■■□ 3.81
COX5A-201ENST00000322347 UNC13AQ9UPW8 1703 aa38.72■■■■□ 3.79
COX5A-201ENST00000322347 PABPN1Q86U42 306 aaKnown RBP eCLIP38.68■■■■□ 3.78
COX5A-201ENST00000322347 BICRAQ9NZM4 1560 aa38.47■■■■□ 3.75
COX5A-201ENST00000322347 DNAJC5BQ9UF47 199 aa38.37■■■■□ 3.73
COX5A-201ENST00000322347 SCRIBQ14160 1630 aa38.25■■■■□ 3.71
COX5A-201ENST00000322347 SHROOM4Q9ULL8 1493 aa38.02■■■■□ 3.68
COX5A-201ENST00000322347 EIF4G1Q04637 1599 aaKnown RBP37.48■■■■□ 3.59
COX5A-201ENST00000322347 CC2D2AQ9P2K1 1620 aa37.42■■■■□ 3.58
COX5A-201ENST00000322347 CECR2Q9BXF3 1484 aa37.25■■■■□ 3.55
COX5A-201ENST00000322347 SMARCA4P51532 1647 aa36.55■■■■□ 3.44
COX5A-201ENST00000322347 NCAPD3P42695 1498 aa36.5■■■■□ 3.43
COX5A-201ENST00000322347 ATAD2BQ9ULI0 1458 aa36.47■■■■□ 3.43
COX5A-201ENST00000322347 BAZ1AQ9NRL2 1556 aaPredicted RBP36.46■■■■□ 3.43
COX5A-201ENST00000322347 SMARCA2P51531 1590 aa36.38■■■■□ 3.41
COX5A-201ENST00000322347 HMGXB3Q12766 1538 aa36.25■■■■□ 3.39
COX5A-201ENST00000322347 MROH2BQ7Z745 1585 aa36.25■■■■□ 3.39
COX5A-201ENST00000322347 PEG3Q9GZU2 1588 aa36.19■■■■□ 3.38
COX5A-201ENST00000322347 BAZ1BQ9UIG0 1483 aaKnown RBP36.14■■■■□ 3.38
COX5A-201ENST00000322347 WIZO95785 1651 aa35.82■■■■□ 3.33
COX5A-201ENST00000322347 NESP48681 1621 aa35.73■■■■□ 3.31
COX5A-201ENST00000322347 RSF1Q96T23 1441 aaPredicted RBP35.72■■■■□ 3.31
COX5A-201ENST00000322347 ERCC6Q03468 1493 aa35.72■■■■□ 3.31
COX5A-201ENST00000322347 LAMC3Q9Y6N6 1575 aa35.56■■■■□ 3.28
COX5A-201ENST00000322347 CUX2O14529 1486 aa35.45■■■■□ 3.27
COX5A-201ENST00000322347 CADPSQ9ULU8 1353 aa35.43■■■■□ 3.26
COX5A-201ENST00000322347 TOP2AP11388 1531 aaKnown RBP35.42■■■■□ 3.26
COX5A-201ENST00000322347 PDS5BQ9NTI5 1447 aa35.37■■■■□ 3.25
COX5A-201ENST00000322347 KIF21AQ7Z4S6 1674 aa35.26■■■■□ 3.23
COX5A-201ENST00000322347 THOC2Q8NI27 1593 aaKnown RBP35.23■■■■□ 3.23
COX5A-201ENST00000322347 CFTRP13569 1480 aa35.13■■■■□ 3.21
COX5A-201ENST00000322347 CCDC88BA6NC98 1476 aa35.03■■■■□ 3.2
COX5A-201ENST00000322347 MRC2Q9UBG0 1479 aa35.02■■■■□ 3.2
COX5A-201ENST00000322347 FANCD2Q9BXW9 1451 aa35.01■■■■□ 3.19
COX5A-201ENST00000322347 CEP164Q9UPV0 1460 aa34.99■■■■□ 3.19
COX5A-201ENST00000322347 WDR62O43379 1518 aa34.89■■■■□ 3.18
COX5A-201ENST00000322347 DNAJC5Q9H3Z4 198 aa34.82■■■■□ 3.16
COX5A-201ENST00000322347 PRDM2Q13029 1718 aa34.77■■■■□ 3.16
COX5A-201ENST00000322347 URB2Q14146 1524 aaKnown RBP34.68■■■■□ 3.14
COX5A-201ENST00000322347 SUPT5HO00267 1087 aaKnown RBP34.59■■■■□ 3.13
COX5A-201ENST00000322347 TOPBP1Q92547 1522 aa34.41■■■■□ 3.1
COX5A-201ENST00000322347 ABCC8Q09428 1581 aa34.38■■■■□ 3.09
COX5A-201ENST00000322347 DNMBPQ6XZF7 1577 aa34.32■■■■□ 3.09
COX5A-201ENST00000322347 IFT140Q96RY7 1462 aa34.27■■■■□ 3.08
COX5A-201ENST00000322347 ZNF608Q9ULD9 1512 aaPredicted RBP34.17■■■■□ 3.06
COX5A-201ENST00000322347 POLA1P09884 1462 aaPredicted RBP34.09■■■■□ 3.05
COX5A-201ENST00000322347 TARBP1Q13395 1621 aaKnown RBP34.04■■■■□ 3.04
COX5A-201ENST00000322347 CUX1P39880 1505 aa34.02■■■■□ 3.04
COX5A-201ENST00000322347 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
COX5A-201ENST00000322347 SOGA1O94964 1423 aa33.97■■■■□ 3.03
COX5A-201ENST00000322347 RAD54L2Q9Y4B4 1467 aa33.97■■■■□ 3.03
COX5A-201ENST00000322347 FGD5Q6ZNL6 1462 aa33.96■■■■□ 3.03
COX5A-201ENST00000322347 OSCARQ8IYS5 282 aa33.96■■■■□ 3.03
COX5A-201ENST00000322347 AQRO60306 1485 aaKnown RBP eCLIP33.95■■■■□ 3.022e-7■■□□□ 12
COX5A-201ENST00000322347 TDRD9Q8NDG6 1382 aaKnown RBP33.84■■■■□ 3.01
COX5A-201ENST00000322347 WDR97A6NE52 1622 aa33.73■■■□□ 2.99
COX5A-201ENST00000322347 WRNQ14191 1432 aaPredicted RBP eCLIP33.68■■■□□ 2.98
COX5A-201ENST00000322347 FBLN2P98095 1184 aa33.63■■■□□ 2.97
COX5A-201ENST00000322347 TOP2BQ02880 1626 aa33.62■■■□□ 2.97
COX5A-201ENST00000322347 ABCA10Q8WWZ4 1543 aa33.62■■■□□ 2.97
COX5A-201ENST00000322347 CHD1O14646 1710 aa33.61■■■□□ 2.97
COX5A-201ENST00000322347 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
COX5A-201ENST00000322347 GRIN2BQ13224 1484 aa33.6■■■□□ 2.97
COX5A-201ENST00000322347 SNAPC4Q5SXM2 1469 aa33.6■■■□□ 2.97
COX5A-201ENST00000322347 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
COX5A-201ENST00000322347 GAPVD1Q14C86 1478 aa33.56■■■□□ 2.96
COX5A-201ENST00000322347 TRIM41Q8WV44 630 aa33.54■■■□□ 2.96
COX5A-201ENST00000322347 MAGI1Q96QZ7 1491 aaPredicted RBP33.53■■■□□ 2.96
COX5A-201ENST00000322347 ABCA5Q8WWZ7 1642 aa33.49■■■□□ 2.95
COX5A-201ENST00000322347 CHMP7Q8WUX9 453 aaPredicted RBP33.47■■■□□ 2.95
COX5A-201ENST00000322347 PBRM1Q86U86 1689 aa33.46■■■□□ 2.95
COX5A-201ENST00000322347 SYNJ2O15056 1496 aa33.41■■■□□ 2.94
COX5A-201ENST00000322347 RIMBP3CA6NJZ7 1639 aa33.41■■■□□ 2.94
COX5A-201ENST00000322347 RIMBP3BA6NNM3 1639 aa33.41■■■□□ 2.94
COX5A-201ENST00000322347 RIMBP3Q9UFD9 1639 aa33.41■■■□□ 2.94
COX5A-201ENST00000322347 ARHGEF11O15085 1522 aa33.38■■■□□ 2.93
COX5A-201ENST00000322347 CLASP1Q7Z460 1538 aa33.26■■■□□ 2.91
COX5A-201ENST00000322347 ADAMTS12P58397 1594 aa33.2■■■□□ 2.91
COX5A-201ENST00000322347 ERICH3Q5RHP9 1530 aa33.19■■■□□ 2.9
COX5A-201ENST00000322347 FHAD1B1AJZ9 1412 aa33.16■■■□□ 2.9
COX5A-201ENST00000322347 GRIN2AQ12879 1464 aa33.15■■■□□ 2.9
COX5A-201ENST00000322347 CYB5RLQ6IPT4 315 aa33.14■■■□□ 2.9
COX5A-201ENST00000322347 ARAP1Q96P48 1450 aa33.1■■■□□ 2.89
COX5A-201ENST00000322347 NUP160Q12769 1436 aa33.02■■■□□ 2.88
COX5A-201ENST00000322347 KIF27Q86VH2 1401 aa33.01■■■□□ 2.87
COX5A-201ENST00000322347 CEP170Q5SW79 1584 aa33■■■□□ 2.87
COX5A-201ENST00000322347 IGF1RP08069 1367 aa32.94■■■□□ 2.86
COX5A-201ENST00000322347 CUL7Q14999 1698 aa32.81■■■□□ 2.84
COX5A-201ENST00000322347 SHROOM2Q13796 1616 aa32.79■■■□□ 2.84
COX5A-201ENST00000322347 ERCC6L2Q5T890 1561 aa32.79■■■□□ 2.84
COX5A-201ENST00000322347 CARMIL1Q5VZK9 1371 aa32.72■■■□□ 2.83
COX5A-201ENST00000322347 JPH4Q96JJ6 628 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms