RNA–Protein interactions for RNA: ENST00000425847.6

MRPL3-202, Transcript of mitochondrial ribosomal protein L3, humanhuman

TSL 2 BASIC

Gene MRPL3, Length 1,457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3-202ENST00000425847 NISCHQ9Y2I1 1504 aa44.27■■■■■ 4.68
MRPL3-202ENST00000425847 CCDC180Q9P1Z9 1646 aa38.98■■■■□ 3.83
MRPL3-202ENST00000425847 ABCC9O60706 1549 aa37.61■■■■□ 3.61
MRPL3-202ENST00000425847 ZCCHC6Q5VYS8 1495 aaKnown RBP36.99■■■■□ 3.51
MRPL3-202ENST00000425847 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
MRPL3-202ENST00000425847 DCAF1Q9Y4B6 1507 aa36.64■■■■□ 3.46
MRPL3-202ENST00000425847 NACADO15069 1562 aa36.56■■■■□ 3.44
MRPL3-202ENST00000425847 MYO15BQ96JP2 1530 aa36.55■■■■□ 3.44
MRPL3-202ENST00000425847 RB1CC1Q8TDY2 1594 aa36.42■■■■□ 3.42
MRPL3-202ENST00000425847 SCRIBQ14160 1630 aa35.67■■■■□ 3.3
MRPL3-202ENST00000425847 UNC13AQ9UPW8 1703 aa35.56■■■■□ 3.28
MRPL3-202ENST00000425847 SHROOM4Q9ULL8 1493 aa35.43■■■■□ 3.26
MRPL3-202ENST00000425847 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.24
MRPL3-202ENST00000425847 BICRAQ9NZM4 1560 aa35.3■■■■□ 3.24
MRPL3-202ENST00000425847 CECR2Q9BXF3 1484 aa34.43■■■■□ 3.1
MRPL3-202ENST00000425847 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.09
MRPL3-202ENST00000425847 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
MRPL3-202ENST00000425847 SMARCA4P51532 1647 aa34.18■■■■□ 3.06
MRPL3-202ENST00000425847 MROH2BQ7Z745 1585 aa34.13■■■■□ 3.05
MRPL3-202ENST00000425847 CC2D2AQ9P2K1 1620 aa34.02■■■■□ 3.04
MRPL3-202ENST00000425847 RSF1Q96T23 1441 aaPredicted RBP34.01■■■■□ 3.03
MRPL3-202ENST00000425847 DNAJC5BQ9UF47 199 aa33.98■■■■□ 3.03
MRPL3-202ENST00000425847 ATAD2BQ9ULI0 1458 aa33.87■■■■□ 3.01
MRPL3-202ENST00000425847 SMARCA2P51531 1590 aa33.83■■■■□ 3.01
MRPL3-202ENST00000425847 PEG3Q9GZU2 1588 aa33.83■■■■□ 3.01
MRPL3-202ENST00000425847 WIZO95785 1651 aa33.78■■■■□ 3
MRPL3-202ENST00000425847 NCAPD3P42695 1498 aa33.76■■■□□ 2.99
MRPL3-202ENST00000425847 SUPT5HO00267 1087 aaKnown RBP33.72■■■□□ 2.99
MRPL3-202ENST00000425847 BAZ1BQ9UIG0 1483 aaKnown RBP33.62■■■□□ 2.97
MRPL3-202ENST00000425847 HMGXB3Q12766 1538 aa33.59■■■□□ 2.97
MRPL3-202ENST00000425847 TOP2AP11388 1531 aaKnown RBP33.45■■■□□ 2.94
MRPL3-202ENST00000425847 CCDC88BA6NC98 1476 aa33.12■■■□□ 2.89
MRPL3-202ENST00000425847 CADPSQ9ULU8 1353 aa32.83■■■□□ 2.85
MRPL3-202ENST00000425847 CFTRP13569 1480 aa32.75■■■□□ 2.83
MRPL3-202ENST00000425847 NESP48681 1621 aa32.73■■■□□ 2.83
MRPL3-202ENST00000425847 LAMC3Q9Y6N6 1575 aa32.72■■■□□ 2.83
MRPL3-202ENST00000425847 PDS5BQ9NTI5 1447 aa32.53■■■□□ 2.8
MRPL3-202ENST00000425847 PRDM2Q13029 1718 aa32.44■■■□□ 2.78
MRPL3-202ENST00000425847 FANCD2Q9BXW9 1451 aa32.42■■■□□ 2.78
MRPL3-202ENST00000425847 ERCC6Q03468 1493 aa32.36■■■□□ 2.77
MRPL3-202ENST00000425847 CEP164Q9UPV0 1460 aa32.31■■■□□ 2.76
MRPL3-202ENST00000425847 KIF21AQ7Z4S6 1674 aa32.31■■■□□ 2.76
MRPL3-202ENST00000425847 MRC2Q9UBG0 1479 aa32.11■■■□□ 2.73
MRPL3-202ENST00000425847 ABCC8Q09428 1581 aa32.08■■■□□ 2.73
MRPL3-202ENST00000425847 URB2Q14146 1524 aaKnown RBP32.04■■■□□ 2.72
MRPL3-202ENST00000425847 WRNQ14191 1432 aaPredicted RBP eCLIP32.04■■■□□ 2.72
MRPL3-202ENST00000425847 THOC2Q8NI27 1593 aaKnown RBP32.03■■■□□ 2.72
MRPL3-202ENST00000425847 CUX1P39880 1505 aa31.97■■■□□ 2.71
MRPL3-202ENST00000425847 TOPBP1Q92547 1522 aa31.97■■■□□ 2.71
MRPL3-202ENST00000425847 WDR62O43379 1518 aa31.97■■■□□ 2.71
MRPL3-202ENST00000425847 DNMBPQ6XZF7 1577 aa31.96■■■□□ 2.71
MRPL3-202ENST00000425847 SYNJ1O43426 1573 aa31.89■■■□□ 2.7
MRPL3-202ENST00000425847 TOP2BQ02880 1626 aa31.86■■■□□ 2.69
MRPL3-202ENST00000425847 CHIC1Q5VXU3 224 aa31.85■■■□□ 2.69
MRPL3-202ENST00000425847 BIVM-ERCC5R4GMW8 1640 aa31.83■■■□□ 2.69
MRPL3-202ENST00000425847 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
MRPL3-202ENST00000425847 FGD5Q6ZNL6 1462 aa31.76■■■□□ 2.68
MRPL3-202ENST00000425847 CUX2O14529 1486 aa31.75■■■□□ 2.67
MRPL3-202ENST00000425847 POLA1P09884 1462 aaPredicted RBP31.74■■■□□ 2.67
MRPL3-202ENST00000425847 SOGA1O94964 1423 aa31.67■■■□□ 2.66
MRPL3-202ENST00000425847 RAD54L2Q9Y4B4 1467 aa31.63■■■□□ 2.65
MRPL3-202ENST00000425847 IFT140Q96RY7 1462 aa31.61■■■□□ 2.65
MRPL3-202ENST00000425847 TARBP1Q13395 1621 aaKnown RBP31.54■■■□□ 2.64
MRPL3-202ENST00000425847 ABCA10Q8WWZ4 1543 aa31.5■■■□□ 2.63
MRPL3-202ENST00000425847 TDRD9Q8NDG6 1382 aaKnown RBP31.42■■■□□ 2.62
MRPL3-202ENST00000425847 ZNF608Q9ULD9 1512 aaPredicted RBP31.42■■■□□ 2.62
MRPL3-202ENST00000425847 WDR97A6NE52 1622 aa31.4■■■□□ 2.62
MRPL3-202ENST00000425847 AQRO60306 1485 aaKnown RBP eCLIP31.36■■■□□ 2.612e-8■■■■■ 42.3
MRPL3-202ENST00000425847 KIF27Q86VH2 1401 aa31.32■■■□□ 2.6
MRPL3-202ENST00000425847 GAPVD1Q14C86 1478 aa31.29■■■□□ 2.6
MRPL3-202ENST00000425847 EIF4G3O43432 1585 aaKnown RBP31.27■■■□□ 2.6
MRPL3-202ENST00000425847 ABCA5Q8WWZ7 1642 aa31.26■■■□□ 2.59
MRPL3-202ENST00000425847 RUSC2Q8N2Y8 1516 aa31.26■■■□□ 2.59
MRPL3-202ENST00000425847 GRIN2BQ13224 1484 aa31.19■■■□□ 2.58
MRPL3-202ENST00000425847 EEA1Q15075 1411 aa31.16■■■□□ 2.58
MRPL3-202ENST00000425847 IGF1RP08069 1367 aa31.16■■■□□ 2.58
MRPL3-202ENST00000425847 FAM9AQ8IZU1 332 aaPredicted RBP31.14■■■□□ 2.58
MRPL3-202ENST00000425847 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
MRPL3-202ENST00000425847 PBRM1Q86U86 1689 aa31.1■■■□□ 2.57
MRPL3-202ENST00000425847 CSRNP3Q8WYN3 585 aa31.09■■■□□ 2.57
MRPL3-202ENST00000425847 SNAPC4Q5SXM2 1469 aa31.04■■■□□ 2.56
MRPL3-202ENST00000425847 MAGI1Q96QZ7 1491 aaPredicted RBP31.02■■■□□ 2.56
MRPL3-202ENST00000425847 CARMIL1Q5VZK9 1371 aa30.97■■■□□ 2.55
MRPL3-202ENST00000425847 FHAD1B1AJZ9 1412 aa30.95■■■□□ 2.55
MRPL3-202ENST00000425847 CUL7Q14999 1698 aa30.93■■■□□ 2.54
MRPL3-202ENST00000425847 ADAMTS12P58397 1594 aa30.92■■■□□ 2.54
MRPL3-202ENST00000425847 CHMP7Q8WUX9 453 aaPredicted RBP30.91■■■□□ 2.54
MRPL3-202ENST00000425847 SYNJ2O15056 1496 aa30.9■■■□□ 2.54
MRPL3-202ENST00000425847 FBLN2P98095 1184 aa30.9■■■□□ 2.54
MRPL3-202ENST00000425847 PRXQ9BXM0 1461 aa30.88■■■□□ 2.53
MRPL3-202ENST00000425847 RAPGEF2Q9Y4G8 1499 aa30.84■■■□□ 2.53
MRPL3-202ENST00000425847 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
MRPL3-202ENST00000425847 CHD1O14646 1710 aa30.74■■■□□ 2.51
MRPL3-202ENST00000425847 KIF21BO75037 1637 aa30.74■■■□□ 2.51
MRPL3-202ENST00000425847 EHMT2Q96KQ7 1210 aa30.7■■■□□ 2.51
MRPL3-202ENST00000425847 OSCARQ8IYS5 282 aa30.66■■■□□ 2.5
MRPL3-202ENST00000425847 GOLGA3Q08378 1498 aa30.65■■■□□ 2.5
MRPL3-202ENST00000425847 NUP160Q12769 1436 aa30.61■■■□□ 2.49
MRPL3-202ENST00000425847 UBTFP17480 764 aaKnown RBP30.6■■■□□ 2.49
MRPL3-202ENST00000425847 LOC105371045A0A1W2PR82 267 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms