Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
AP3D1O14617 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
AP3D1O14617 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
AP3D1O14617 AL356512.1-201ENST00000607453 1739 ntBASIC30.36■■■□□ 2.45
AP3D1O14617 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.32■■■□□ 2.44
AP3D1O14617 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.26■■■□□ 2.44
AP3D1O14617 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
AP3D1O14617 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
AP3D1O14617 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
AP3D1O14617 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.93■■■□□ 2.38
AP3D1O14617 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
AP3D1O14617 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.66■■■□□ 2.34
AP3D1O14617 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.31
AP3D1O14617 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.39■■■□□ 2.3
AP3D1O14617 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
AP3D1O14617 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
AP3D1O14617 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
AP3D1O14617 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.02■■■□□ 2.24
AP3D1O14617 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.01■■■□□ 2.23
AP3D1O14617 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
AP3D1O14617 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
AP3D1O14617 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
AP3D1O14617 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
AP3D1O14617 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
AP3D1O14617 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.6■■■□□ 2.17
AP3D1O14617 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
AP3D1O14617 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
AP3D1O14617 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
AP3D1O14617 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
AP3D1O14617 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.38■■■□□ 2.13
AP3D1O14617 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
AP3D1O14617 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
AP3D1O14617 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
AP3D1O14617 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
AP3D1O14617 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.3■■■□□ 2.12
AP3D1O14617 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
AP3D1O14617 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
AP3D1O14617 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
AP3D1O14617 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.13■■■□□ 2.09
AP3D1O14617 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.08■■■□□ 2.09
AP3D1O14617 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.03■■■□□ 2.08
AP3D1O14617 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
AP3D1O14617 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
AP3D1O14617 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.74■■■□□ 2.03
AP3D1O14617 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.7■■■□□ 2.02
AP3D1O14617 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
AP3D1O14617 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
AP3D1O14617 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
AP3D1O14617 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
AP3D1O14617 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
AP3D1O14617 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
AP3D1O14617 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.51■■□□□ 1.99
AP3D1O14617 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.48■■□□□ 1.99
AP3D1O14617 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
AP3D1O14617 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
AP3D1O14617 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
AP3D1O14617 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
AP3D1O14617 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
AP3D1O14617 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
AP3D1O14617 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
AP3D1O14617 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
AP3D1O14617 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
AP3D1O14617 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.35■■□□□ 1.97
AP3D1O14617 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
AP3D1O14617 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
AP3D1O14617 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
AP3D1O14617 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
AP3D1O14617 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.28■■□□□ 1.96
AP3D1O14617 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.27■■□□□ 1.96
AP3D1O14617 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
AP3D1O14617 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
AP3D1O14617 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
AP3D1O14617 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
AP3D1O14617 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
AP3D1O14617 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
AP3D1O14617 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
AP3D1O14617 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
AP3D1O14617 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
AP3D1O14617 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
AP3D1O14617 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
AP3D1O14617 AC015813.7-201ENST00000623294 581 ntBASIC26.98■■□□□ 1.91
AP3D1O14617 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
AP3D1O14617 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.9■■□□□ 1.9
AP3D1O14617 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
AP3D1O14617 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
AP3D1O14617 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
AP3D1O14617 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.84■■□□□ 1.89
AP3D1O14617 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
AP3D1O14617 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
AP3D1O14617 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
AP3D1O14617 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
AP3D1O14617 AC145285.7-201ENST00000614819 1539 ntBASIC26.75■■□□□ 1.87
AP3D1O14617 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
AP3D1O14617 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
AP3D1O14617 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.64■■□□□ 1.86
AP3D1O14617 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
AP3D1O14617 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
AP3D1O14617 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.57■■□□□ 1.84
AP3D1O14617 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
AP3D1O14617 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms