Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF213Q63HN8 UNC93B8-201ENST00000511903 705 ntBASIC13.83□□□□□ -0.2
RNF213Q63HN8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF213Q63HN8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF213Q63HN8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF213Q63HN8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF213Q63HN8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC13.83□□□□□ -0.2
RNF213Q63HN8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC13.83□□□□□ -0.2
RNF213Q63HN8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC13.82□□□□□ -0.2
RNF213Q63HN8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RNF213Q63HN8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC13.82□□□□□ -0.2
RNF213Q63HN8 AC096631.2-201ENST00000436136 790 ntBASIC13.82□□□□□ -0.2
RNF213Q63HN8 PVT1_1.1-201ENST00000615125 194 ntBASIC13.82□□□□□ -0.2
RNF213Q63HN8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF213Q63HN8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RNF213Q63HN8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF213Q63HN8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF213Q63HN8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF213Q63HN8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC13.81□□□□□ -0.2
RNF213Q63HN8 MIR219A2-201ENST00000608502 1504 ntBASIC13.81□□□□□ -0.2
RNF213Q63HN8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF213Q63HN8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF213Q63HN8 KRT125P-201ENST00000546827 989 ntBASIC13.8□□□□□ -0.2
RNF213Q63HN8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF213Q63HN8 MIR4508-201ENST00000584178 70 ntBASIC13.8□□□□□ -0.2
RNF213Q63HN8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF213Q63HN8 AL136116.3-201ENST00000402907 1138 ntBASIC13.79□□□□□ -0.2
RNF213Q63HN8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF213Q63HN8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF213Q63HN8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF213Q63HN8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF213Q63HN8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
RNF213Q63HN8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF213Q63HN8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RNF213Q63HN8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF213Q63HN8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF213Q63HN8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF213Q63HN8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF213Q63HN8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF213Q63HN8 AL162430.1-201ENST00000480705 870 ntBASIC13.78□□□□□ -0.2
RNF213Q63HN8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
RNF213Q63HN8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF213Q63HN8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF213Q63HN8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC13.77□□□□□ -0.2
RNF213Q63HN8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF213Q63HN8 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.77□□□□□ -0.21
RNF213Q63HN8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF213Q63HN8 RAP2CP1-202ENST00000605179 643 ntBASIC13.76□□□□□ -0.21
RNF213Q63HN8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF213Q63HN8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF213Q63HN8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF213Q63HN8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RNF213Q63HN8 MIR4787-201ENST00000607364 84 ntBASIC13.76□□□□□ -0.21
RNF213Q63HN8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF213Q63HN8 REST-210ENST00000638187 1334 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF213Q63HN8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF213Q63HN8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RNF213Q63HN8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF213Q63HN8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF213Q63HN8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.75□□□□□ -0.21
RNF213Q63HN8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF213Q63HN8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF213Q63HN8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF213Q63HN8 AC110285.7-201ENST00000624417 1536 ntBASIC13.74□□□□□ -0.21
RNF213Q63HN8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF213Q63HN8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF213Q63HN8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF213Q63HN8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF213Q63HN8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF213Q63HN8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
RNF213Q63HN8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF213Q63HN8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF213Q63HN8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF213Q63HN8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
RNF213Q63HN8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF213Q63HN8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF213Q63HN8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF213Q63HN8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RNF213Q63HN8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF213Q63HN8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF213Q63HN8 HYI-210ENST00000486909 905 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF213Q63HN8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF213Q63HN8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
RNF213Q63HN8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF213Q63HN8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF213Q63HN8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF213Q63HN8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF213Q63HN8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF213Q63HN8 WHAMMP2-203ENST00000563942 1603 ntBASIC13.71□□□□□ -0.21
RNF213Q63HN8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF213Q63HN8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RNF213Q63HN8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC13.71□□□□□ -0.22
RNF213Q63HN8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF213Q63HN8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF213Q63HN8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF213Q63HN8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF213Q63HN8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF213Q63HN8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF213Q63HN8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF213Q63HN8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms