Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC29.32■■■□□ 2.28
COL13A1Q5TAT6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL13A1Q5TAT6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
COL13A1Q5TAT6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC29.32■■■□□ 2.28
COL13A1Q5TAT6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL13A1Q5TAT6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
COL13A1Q5TAT6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL13A1Q5TAT6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC29.31■■■□□ 2.28
COL13A1Q5TAT6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
COL13A1Q5TAT6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL13A1Q5TAT6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.31■■■□□ 2.28
COL13A1Q5TAT6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
COL13A1Q5TAT6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.31■■■□□ 2.28
COL13A1Q5TAT6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.3■■■□□ 2.28
COL13A1Q5TAT6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
COL13A1Q5TAT6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.29■■■□□ 2.28
COL13A1Q5TAT6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
COL13A1Q5TAT6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
COL13A1Q5TAT6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC29.28■■■□□ 2.28
COL13A1Q5TAT6 LONRF2P2-201ENST00000439212 571 ntBASIC29.28■■■□□ 2.28
COL13A1Q5TAT6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
COL13A1Q5TAT6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.27■■■□□ 2.28
COL13A1Q5TAT6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.27■■■□□ 2.28
COL13A1Q5TAT6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
COL13A1Q5TAT6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.27■■■□□ 2.28
COL13A1Q5TAT6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL13A1Q5TAT6 UNC93B8-201ENST00000511903 705 ntBASIC29.26■■■□□ 2.27
COL13A1Q5TAT6 AC131281.2-201ENST00000520478 145 ntBASIC29.26■■■□□ 2.27
COL13A1Q5TAT6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
COL13A1Q5TAT6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL13A1Q5TAT6 AC135279.3-201ENST00000610945 1311 ntBASIC29.25■■■□□ 2.27
COL13A1Q5TAT6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL13A1Q5TAT6 KRT16P3-201ENST00000439127 1283 ntBASIC29.24■■■□□ 2.27
COL13A1Q5TAT6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC29.24■■■□□ 2.27
COL13A1Q5TAT6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL13A1Q5TAT6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL13A1Q5TAT6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.23■■■□□ 2.27
COL13A1Q5TAT6 AL136116.3-201ENST00000402907 1138 ntBASIC29.23■■■□□ 2.27
COL13A1Q5TAT6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.23■■■□□ 2.27
COL13A1Q5TAT6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
COL13A1Q5TAT6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC29.23■■■□□ 2.27
COL13A1Q5TAT6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL13A1Q5TAT6 AC110285.7-201ENST00000624417 1536 ntBASIC29.22■■■□□ 2.27
COL13A1Q5TAT6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL13A1Q5TAT6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL13A1Q5TAT6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL13A1Q5TAT6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.21■■■□□ 2.27
COL13A1Q5TAT6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.21■■■□□ 2.27
COL13A1Q5TAT6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL13A1Q5TAT6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
COL13A1Q5TAT6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.2■■■□□ 2.26
COL13A1Q5TAT6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.2■■■□□ 2.26
COL13A1Q5TAT6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.2■■■□□ 2.26
COL13A1Q5TAT6 AC096631.2-201ENST00000436136 790 ntBASIC29.19■■■□□ 2.26
COL13A1Q5TAT6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.19■■■□□ 2.26
COL13A1Q5TAT6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.19■■■□□ 2.26
COL13A1Q5TAT6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC29.19■■■□□ 2.26
COL13A1Q5TAT6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.19■■■□□ 2.26
COL13A1Q5TAT6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
COL13A1Q5TAT6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC29.18■■■□□ 2.26
COL13A1Q5TAT6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
COL13A1Q5TAT6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.17■■■□□ 2.26
COL13A1Q5TAT6 MIR4787-201ENST00000607364 84 ntBASIC29.17■■■□□ 2.26
COL13A1Q5TAT6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.16■■■□□ 2.26
COL13A1Q5TAT6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
COL13A1Q5TAT6 AC133561.4-201ENST00000566112 224 ntBASIC29.16■■■□□ 2.26
COL13A1Q5TAT6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
COL13A1Q5TAT6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.16■■■□□ 2.26
COL13A1Q5TAT6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.15■■■□□ 2.26
COL13A1Q5TAT6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL13A1Q5TAT6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL13A1Q5TAT6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL13A1Q5TAT6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
COL13A1Q5TAT6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.14■■■□□ 2.26
COL13A1Q5TAT6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
COL13A1Q5TAT6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL13A1Q5TAT6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
COL13A1Q5TAT6 KRT125P-201ENST00000546827 989 ntBASIC29.12■■■□□ 2.25
COL13A1Q5TAT6 RAP2CP1-202ENST00000605179 643 ntBASIC29.12■■■□□ 2.25
COL13A1Q5TAT6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
COL13A1Q5TAT6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
COL13A1Q5TAT6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.11■■■□□ 2.25
COL13A1Q5TAT6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
COL13A1Q5TAT6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC29.11■■■□□ 2.25
COL13A1Q5TAT6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.1■■■□□ 2.25
COL13A1Q5TAT6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL13A1Q5TAT6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC29.09■■■□□ 2.25
COL13A1Q5TAT6 ANKRD20A6P-201ENST00000618763 204 ntBASIC29.09■■■□□ 2.25
COL13A1Q5TAT6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.09■■■□□ 2.25
COL13A1Q5TAT6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL13A1Q5TAT6 AC018755.3-202ENST00000596210 929 ntBASIC29.08■■■□□ 2.25
COL13A1Q5TAT6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL13A1Q5TAT6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
COL13A1Q5TAT6 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.07■■■□□ 2.24
COL13A1Q5TAT6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
COL13A1Q5TAT6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC29.06■■■□□ 2.24
COL13A1Q5TAT6 WHAMMP2-203ENST00000563942 1603 ntBASIC29.05■■■□□ 2.24
COL13A1Q5TAT6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
COL13A1Q5TAT6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.05■■■□□ 2.24
COL13A1Q5TAT6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.05■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms