Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC38.54■■■■□ 3.76
RAPGEF3O95398 YBX1P4-201ENST00000392794 808 ntBASIC38.54■■■■□ 3.76
RAPGEF3O95398 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC38.53■■■■□ 3.76
RAPGEF3O95398 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
RAPGEF3O95398 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
RAPGEF3O95398 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
RAPGEF3O95398 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC38.52■■■■□ 3.76
RAPGEF3O95398 AC025884.2-201ENST00000553429 711 ntBASIC38.52■■■■□ 3.76
RAPGEF3O95398 RAP2CP1-202ENST00000605179 643 ntBASIC38.52■■■■□ 3.76
RAPGEF3O95398 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC38.52■■■■□ 3.76
RAPGEF3O95398 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
RAPGEF3O95398 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC38.51■■■■□ 3.76
RAPGEF3O95398 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC38.51■■■■□ 3.76
RAPGEF3O95398 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC38.51■■■■□ 3.76
RAPGEF3O95398 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
RAPGEF3O95398 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
RAPGEF3O95398 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
RAPGEF3O95398 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
RAPGEF3O95398 AL356441.2-201ENST00000443009 864 ntBASIC38.5■■■■□ 3.75
RAPGEF3O95398 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC38.49■■■■□ 3.75
RAPGEF3O95398 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
RAPGEF3O95398 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC38.49■■■■□ 3.75
RAPGEF3O95398 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
RAPGEF3O95398 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
RAPGEF3O95398 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
RAPGEF3O95398 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC38.47■■■■□ 3.75
RAPGEF3O95398 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC38.47■■■■□ 3.75
RAPGEF3O95398 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
RAPGEF3O95398 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC38.46■■■■□ 3.75
RAPGEF3O95398 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
RAPGEF3O95398 AC093536.1-201ENST00000569153 554 ntBASIC38.46■■■■□ 3.75
RAPGEF3O95398 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC38.46■■■■□ 3.75
RAPGEF3O95398 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC38.45■■■■□ 3.75
RAPGEF3O95398 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
RAPGEF3O95398 AC139795.1-202ENST00000500444 432 ntBASIC38.45■■■■□ 3.75
RAPGEF3O95398 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC38.45■■■■□ 3.75
RAPGEF3O95398 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
RAPGEF3O95398 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC38.44■■■■□ 3.74
RAPGEF3O95398 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC38.43■■■■□ 3.74
RAPGEF3O95398 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC38.43■■■■□ 3.74
RAPGEF3O95398 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC38.43■■■■□ 3.74
RAPGEF3O95398 AL359258.2-201ENST00000564063 1566 ntBASIC38.43■■■■□ 3.74
RAPGEF3O95398 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC38.42■■■■□ 3.74
RAPGEF3O95398 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC38.42■■■■□ 3.74
RAPGEF3O95398 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC38.42■■■■□ 3.74
RAPGEF3O95398 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC38.42■■■■□ 3.74
RAPGEF3O95398 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC38.42■■■■□ 3.74
RAPGEF3O95398 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC38.41■■■■□ 3.74
RAPGEF3O95398 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC38.41■■■■□ 3.74
RAPGEF3O95398 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
RAPGEF3O95398 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC38.4■■■■□ 3.74
RAPGEF3O95398 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
RAPGEF3O95398 MIR6765-201ENST00000614092 87 ntBASIC38.4■■■■□ 3.74
RAPGEF3O95398 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC38.4■■■■□ 3.74
RAPGEF3O95398 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC38.4■■■■□ 3.74
RAPGEF3O95398 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC38.39■■■■□ 3.74
RAPGEF3O95398 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC38.39■■■■□ 3.74
RAPGEF3O95398 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC38.39■■■■□ 3.74
RAPGEF3O95398 PRTG-204ENST00000561292 833 ntTSL 3 BASIC38.38■■■■□ 3.73
RAPGEF3O95398 MIR4508-201ENST00000584178 70 ntBASIC38.38■■■■□ 3.73
RAPGEF3O95398 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC38.38■■■■□ 3.73
RAPGEF3O95398 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC38.38■■■■□ 3.73
RAPGEF3O95398 AL135925.1-201ENST00000605920 1701 ntBASIC38.37■■■■□ 3.73
RAPGEF3O95398 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC38.36■■■■□ 3.73
RAPGEF3O95398 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC38.36■■■■□ 3.73
RAPGEF3O95398 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC38.36■■■■□ 3.73
RAPGEF3O95398 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC38.36■■■■□ 3.73
RAPGEF3O95398 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC38.36■■■■□ 3.73
RAPGEF3O95398 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
RAPGEF3O95398 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC38.35■■■■□ 3.73
RAPGEF3O95398 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC38.35■■■■□ 3.73
RAPGEF3O95398 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC38.33■■■■□ 3.73
RAPGEF3O95398 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC38.32■■■■□ 3.72
RAPGEF3O95398 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC38.32■■■■□ 3.72
RAPGEF3O95398 AC103724.3-201ENST00000564481 992 ntBASIC38.32■■■■□ 3.72
RAPGEF3O95398 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC38.31■■■■□ 3.72
RAPGEF3O95398 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC38.31■■■■□ 3.72
RAPGEF3O95398 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC38.31■■■■□ 3.72
RAPGEF3O95398 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
RAPGEF3O95398 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC38.31■■■■□ 3.72
RAPGEF3O95398 LSM7-203ENST00000585409 512 ntTSL 2 BASIC38.31■■■■□ 3.72
RAPGEF3O95398 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
RAPGEF3O95398 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC38.31■■■■□ 3.72
RAPGEF3O95398 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC38.3■■■■□ 3.72
RAPGEF3O95398 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC38.3■■■■□ 3.72
RAPGEF3O95398 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC38.3■■■■□ 3.72
RAPGEF3O95398 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
RAPGEF3O95398 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
RAPGEF3O95398 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC38.29■■■■□ 3.72
RAPGEF3O95398 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC38.28■■■■□ 3.72
RAPGEF3O95398 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC38.27■■■■□ 3.72
RAPGEF3O95398 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC38.27■■■■□ 3.72
RAPGEF3O95398 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC38.26■■■■□ 3.72
RAPGEF3O95398 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC38.25■■■■□ 3.71
RAPGEF3O95398 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC38.25■■■■□ 3.71
RAPGEF3O95398 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC38.25■■■■□ 3.71
RAPGEF3O95398 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC38.24■■■■□ 3.71
RAPGEF3O95398 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
RAPGEF3O95398 IDNK-201ENST00000376417 511 ntTSL 5 BASIC38.24■■■■□ 3.71
RAPGEF3O95398 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms