Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
SNAI2O43623 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.41■□□□□ 0.54
SNAI2O43623 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNAI2O43623 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNAI2O43623 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNAI2O43623 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.41■□□□□ 0.54
SNAI2O43623 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNAI2O43623 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SNAI2O43623 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNAI2O43623 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.4■□□□□ 0.54
SNAI2O43623 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNAI2O43623 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SNAI2O43623 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.39■□□□□ 0.53
SNAI2O43623 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNAI2O43623 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAI2O43623 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.39■□□□□ 0.53
SNAI2O43623 AC145676.1-201ENST00000514988 2004 ntBASIC18.39■□□□□ 0.53
SNAI2O43623 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI2O43623 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAI2O43623 CAHM-201ENST00000604200 896 ntBASIC18.38■□□□□ 0.53
SNAI2O43623 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SNAI2O43623 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.37■□□□□ 0.53
SNAI2O43623 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SNAI2O43623 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SNAI2O43623 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI2O43623 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI2O43623 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.37■□□□□ 0.53
SNAI2O43623 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAI2O43623 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI2O43623 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI2O43623 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI2O43623 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.36■□□□□ 0.53
SNAI2O43623 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI2O43623 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SNAI2O43623 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAI2O43623 AC135983.2-203ENST00000454486 1613 ntBASIC18.35■□□□□ 0.53
SNAI2O43623 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.35■□□□□ 0.53
SNAI2O43623 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAI2O43623 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI2O43623 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI2O43623 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.34■□□□□ 0.53
SNAI2O43623 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNAI2O43623 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNAI2O43623 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI2O43623 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.33■□□□□ 0.53
SNAI2O43623 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.33■□□□□ 0.52
SNAI2O43623 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.33■□□□□ 0.52
SNAI2O43623 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SNAI2O43623 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SNAI2O43623 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI2O43623 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI2O43623 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI2O43623 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.32■□□□□ 0.52
SNAI2O43623 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.32■□□□□ 0.52
SNAI2O43623 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.32■□□□□ 0.52
SNAI2O43623 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.31■□□□□ 0.52
SNAI2O43623 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SNAI2O43623 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNAI2O43623 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SNAI2O43623 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.3■□□□□ 0.52
SNAI2O43623 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SNAI2O43623 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI2O43623 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI2O43623 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SNAI2O43623 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI2O43623 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.29■□□□□ 0.52
SNAI2O43623 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI2O43623 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI2O43623 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI2O43623 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI2O43623 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI2O43623 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI2O43623 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.28■□□□□ 0.52
SNAI2O43623 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.28■□□□□ 0.52
SNAI2O43623 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI2O43623 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI2O43623 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SNAI2O43623 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNAI2O43623 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.27■□□□□ 0.52
SNAI2O43623 WHAMMP2-203ENST00000563942 1603 ntBASIC18.27■□□□□ 0.52
SNAI2O43623 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNAI2O43623 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SNAI2O43623 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SNAI2O43623 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.27■□□□□ 0.52
SNAI2O43623 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNAI2O43623 AC136428.2-201ENST00000563187 214 ntBASIC18.27■□□□□ 0.52
SNAI2O43623 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.27■□□□□ 0.52
SNAI2O43623 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNAI2O43623 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNAI2O43623 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNAI2O43623 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNAI2O43623 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNAI2O43623 AC020928.2-201ENST00000588717 2197 ntBASIC18.27■□□□□ 0.51
SNAI2O43623 AC093323.1-202ENST00000635031 2045 ntBASIC18.27■□□□□ 0.51
SNAI2O43623 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNAI2O43623 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
SNAI2O43623 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAI2O43623 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SNAI2O43623 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SNAI2O43623 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms