Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.4■□□□□ 0.7
CBX1P83916 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.4■□□□□ 0.7
CBX1P83916 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.4■□□□□ 0.7
CBX1P83916 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX1P83916 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.4■□□□□ 0.7
CBX1P83916 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX1P83916 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
CBX1P83916 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX1P83916 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX1P83916 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX1P83916 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX1P83916 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CBX1P83916 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.4■□□□□ 0.7
CBX1P83916 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CBX1P83916 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CBX1P83916 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CBX1P83916 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CBX1P83916 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CBX1P83916 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CBX1P83916 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CBX1P83916 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CBX1P83916 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.39■□□□□ 0.69
CBX1P83916 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CBX1P83916 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.39■□□□□ 0.69
CBX1P83916 PHGDH-210ENST00000641115 1638 ntBASIC19.39■□□□□ 0.69
CBX1P83916 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CBX1P83916 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX1P83916 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.39■□□□□ 0.69
CBX1P83916 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CBX1P83916 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CBX1P83916 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
CBX1P83916 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CBX1P83916 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 AC239859.2-201ENST00000444165 318 ntBASIC19.38■□□□□ 0.69
CBX1P83916 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.38■□□□□ 0.69
CBX1P83916 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CBX1P83916 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.38■□□□□ 0.69
CBX1P83916 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CBX1P83916 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 FAM21FP-204ENST00000608637 956 ntBASIC19.38■□□□□ 0.69
CBX1P83916 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.38■□□□□ 0.69
CBX1P83916 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CBX1P83916 LINC02228-204ENST00000642115 2962 ntBASIC19.38■□□□□ 0.69
CBX1P83916 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.38■□□□□ 0.69
CBX1P83916 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CBX1P83916 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX1P83916 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CBX1P83916 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.37■□□□□ 0.69
CBX1P83916 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.37■□□□□ 0.69
CBX1P83916 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CBX1P83916 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.37■□□□□ 0.69
CBX1P83916 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CBX1P83916 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 SDHAP1-207ENST00000440850 2000 ntBASIC19.37■□□□□ 0.69
CBX1P83916 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.37■□□□□ 0.69
CBX1P83916 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
CBX1P83916 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.37■□□□□ 0.69
CBX1P83916 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX1P83916 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CBX1P83916 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CBX1P83916 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.36■□□□□ 0.69
CBX1P83916 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CBX1P83916 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.36■□□□□ 0.69
CBX1P83916 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX1P83916 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms